Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 6.5e-70 267.3 138 100.0
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 7.7e-47 190.7 133 76.7
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 4.2e-45 184.9 137 70.8
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 4.4e-42 174.9 141 66.0
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.4e-40 169.9 132 68.9
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 7.0e-40 167.5 128 69.5
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 4.5e-39 164.9 135 65.9
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 5.0e-38 161.4 132 62.9
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 1.5e-37 159.8 129 65.9
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 3.2e-37 158.7 126 68.3
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.4e-35 153.3 133 60.9
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 8.8e-35 150.6 133 60.2
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 8.8e-35 150.6 126 61.9
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.3e-33 146.7 133 59.4
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 1.8e-32 142.9 131 60.3
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 4.5e-31 138.3 109 67.9
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.0e-30 137.1 101 68.3
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 1.3e-30 136.7 139 51.8
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 2.9e-30 135.6 136 55.1
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 3.8e-30 135.2 134 55.2
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 5.0e-30 134.8 140 50.7
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 1.1e-29 133.7 128 57.0
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.5e-29 133.3 111 66.7
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 2.5e-29 132.5 141 49.6
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 9.5e-29 130.6 130 52.3
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.2e-28 130.2 148 53.4
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 2.1e-28 129.4 99 68.7
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 2.1e-28 129.4 103 67.0
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 3.6e-28 128.6 147 52.4
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 3.6e-28 128.6 100 64.0
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 4.7e-28 128.3 142 53.5
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 6.1e-28 127.9 158 48.7
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 6.1e-28 127.9 137 52.6
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 8.0e-28 127.5 143 52.4
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 5.2e-27 124.8 156 50.6
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 6.8e-27 124.4 145 49.0
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 4.4e-26 121.7 125 53.6
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 4.4e-26 121.7 128 51.6
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 5.7e-26 121.3 149 49.0
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 9.8e-26 120.6 93 64.5
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.3e-25 120.2 131 55.0
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.3e-25 120.2 141 49.6
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 3.7e-25 118.6 145 50.3
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.9e-25 118.2 99 58.6
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 6.3e-25 117.9 153 46.4
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 6.3e-25 117.9 157 44.6
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.1e-24 117.1 125 48.8
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.4e-24 116.7 145 51.7
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 1.4e-24 116.7 133 52.6
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.8e-24 116.3 122 51.6
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 4.1e-24 115.2 126 49.2
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 9.2e-24 114.0 112 55.4
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 2.0e-23 112.8 121 53.7
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 2.7e-23 112.5 92 63.0
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 3.5e-23 112.1 134 49.3
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 7.8e-23 110.9 134 50.7
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 3.9e-22 108.6 110 55.5
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 3.9e-22 108.6 116 51.7
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 5.0e-22 108.2 115 53.0
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 5.0e-22 108.2 115 53.0
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 8.6e-22 107.5 129 53.5
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 1.1e-21 107.1 134 44.0
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 4.3e-21 105.1 98 56.1
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 4.3e-21 105.1 110 52.7
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.2e-20 103.6 105 58.1
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 1.2e-20 103.6 141 44.0
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 2.1e-20 102.8 142 43.7
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 3.6e-20 102.1 130 46.2
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.0e-19 100.5 106 54.7
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 6.8e-19 97.8 119 46.2
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 2.6e-18 95.9 102 54.9
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 7.5e-18 94.4 101 52.5
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 7.5e-18 94.4 101 53.5
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 1.3e-17 93.6 101 52.5
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.3e-17 93.6 98 54.1
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.7e-17 93.2 98 54.1
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 4.9e-17 91.7 103 53.4
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 8.3e-17 90.9 126 42.1
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.1e-16 90.5 98 53.1
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 1.9e-16 89.7 98 52.0
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 1.2e-15 87.0 103 50.5
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 1.6e-15 86.7 101 49.5
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 7.8e-15 84.3 130 40.0
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.8e-15 84.3 109 50.5
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 7.8e-15 84.3 185 36.2
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 7.8e-15 84.3 185 36.2
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 1.3e-14 83.6 138 42.0
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 1.3e-14 83.6 122 45.1
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 5.0e-14 81.6 97 47.4
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.0e-14 81.6 109 45.9
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 5.6e-13 78.2 117 44.4
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 9.5e-13 77.4 99 49.5
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.6e-12 76.6 105 41.0
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 8.9e-11 70.9 116 40.5
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.2e-10 70.5 122 36.1
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 4.4e-10 68.6 124 41.9
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 7.5e-10 67.8 136 35.3
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 1.1e-08 63.9 104 39.4
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 1.1e-08 63.9 104 39.4
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.1e-08 62.0 89 43.8
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 7.1e-08 61.2 92 44.6
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 1.6e-07 60.1 113 33.6
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 2.7e-07 59.3 80 42.5
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 4.6e-07 58.5 86 40.7
Aqoxy6G03038 Aquilegia oxysepala HOM05D008614 ORTHO05D010420 5.1e-06 55.1 92 35.9
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 8.6e-06 54.3 43 58.1


User provided reference genes

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