Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G203450 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 2.4e-57 225.3 118 100.0
Glyma.15G232200 Glycine max HOM05D002974 ORTHO05D002992 9.2e-41 170.2 123 81.3
Glyma.13G193800 Glycine max HOM05D002974 ORTHO05D002992 3.9e-39 164.9 125 81.6
Medtr8g040080 Medicago truncatula HOM05D002974 ORTHO05D002992 1.4e-25 119.8 121 63.6
TPR.G22516 Trifolium pratense HOM05D002974 ORTHO05D002992 2.4e-25 119.0 122 61.5
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 3.9e-23 111.7 126 58.7
Lj3g0024515 Lotus japonicus HOM05D002974 ORTHO05D002992 1.8e-20 102.8 129 58.1
Psat4g145360 Pisum sativum HOM05D002974 ORTHO05D002992 1.5e-19 99.8 79 73.4
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 5.8e-19 97.8 123 52.8
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 8.4e-18 94.0 123 51.2
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 4.2e-17 91.7 119 52.9
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 5.4e-17 91.3 124 50.0
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 6.0e-16 87.8 125 48.0
Lalb_Chr21g0315251 Lupinus albus HOM05D002974 ORTHO05D002992 1.6e-13 79.7 116 48.3
Glyma.04G134200 Glycine max HOM05D002974 ORTHO05D002992 1.1e-12 77.0 120 49.2
VMungo1080G0254 Vigna mungo HOM05D002974 ORTHO05D002992 1.2e-11 73.6 120 46.7
Phvul.005G024800 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 4.9e-10 68.2 122 44.3
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 1.2e-08 63.5 63 55.6
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 6.0e-08 61.2 49 67.3
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 3.0e-07 58.9 75 41.3
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 3.9e-07 58.5 68 51.5
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 8.7e-07 57.4 45 62.2
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 8.7e-07 57.4 55 61.8
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 8.7e-07 57.4 55 61.8
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 8.7e-07 57.4 47 63.8
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 8.7e-07 57.4 50 64.0
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.1e-06 57.0 55 63.6
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.5e-06 56.6 63 58.7
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.9e-06 56.2 97 40.2
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 2.5e-06 55.8 58 60.3
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 2.5e-06 55.8 117 41.9
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 2.5e-06 55.8 117 41.9
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 2.5e-06 55.8 63 54.0
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 3.3e-06 55.5 49 63.3
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.3e-06 55.5 97 45.4
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 3.3e-06 55.5 46 67.4
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 3.3e-06 55.5 39 74.4
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 4.3e-06 55.1 49 61.2
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 4.3e-06 55.1 49 61.2
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 4.3e-06 55.1 106 40.6
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 4.3e-06 55.1 44 65.9
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 5.6e-06 54.7 49 61.2
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 5.6e-06 54.7 47 57.4
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 5.6e-06 54.7 49 59.2
Solyc10g078440.2 Solanum lycopersicum HOM05D015198 ORTHO05D002992 5.6e-06 54.7 51 56.9
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 5.6e-06 54.7 128 36.7
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 5.6e-06 54.7 47 66.0
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 7.4e-06 54.3 129 34.9
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 7.4e-06 54.3 47 61.7
Medtr7g089860 Medicago truncatula HOM05D002974 ORTHO05D002992 7.4e-06 54.3 33 81.8
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 9.6e-06 53.9 43 58.1


User provided reference genes

Program Settings