Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.1e-180 635.6 316 100.0
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.8e-160 569.3 335 84.8
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 3.9e-155 551.6 337 84.0
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 2.0e-151 539.3 334 79.9
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 2.6e-151 538.9 336 80.1
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 5.9e-151 537.7 325 83.7
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.7e-150 536.2 330 81.2
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 2.2e-150 535.8 337 79.2
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 7.7e-143 510.8 343 76.1
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 7.7e-143 510.8 343 76.1
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 9.4e-141 503.8 334 76.0
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.6e-140 503.1 334 76.0
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 8.0e-140 500.7 330 75.8
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.4e-139 500.0 325 76.3
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 4.0e-139 498.4 330 76.7
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 4.0e-139 498.4 333 76.3
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 6.8e-139 497.7 325 77.5
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.0e-138 496.1 326 76.4
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 3.4e-138 495.4 328 75.3
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 4.4e-138 495.0 326 75.8
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.7e-137 493.0 322 76.4
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.7e-137 493.0 330 76.1
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.8e-137 492.3 326 74.8
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 3.7e-137 491.9 322 76.1
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 3.1e-136 488.8 332 73.5
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 4.1e-136 488.4 333 73.0
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 5.3e-136 488.0 328 73.8
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 7.0e-136 487.6 330 74.2
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 9.1e-136 487.3 326 76.1
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 9.1e-136 487.3 332 72.9
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 2.7e-135 485.7 326 74.8
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 3.5e-135 485.3 331 73.7
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 4.5e-135 485.0 323 74.6
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 7.7e-135 484.2 326 75.5
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.0e-134 483.8 333 73.9
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 2.2e-134 482.6 326 74.5
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 2.9e-134 482.3 330 74.2
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 6.5e-134 481.1 332 73.2
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 1.5e-133 479.9 322 75.8
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 3.2e-133 478.8 325 74.8
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 4.2e-133 478.4 329 74.2
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 7.2e-133 477.6 316 75.9
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.6e-132 475.3 325 75.1
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.7e-132 474.9 340 71.8
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 6.1e-132 474.6 332 72.0
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 2.3e-131 472.6 372 67.2
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 1.2e-130 470.3 329 72.0
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-130 469.9 340 70.9
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.0e-130 469.5 371 67.1
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.4e-130 468.8 340 70.6
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 7.5e-130 467.6 333 71.2
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 7.5e-130 467.6 330 73.0
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 6.3e-129 464.5 335 71.0
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.8e-128 463.0 335 71.0
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 2.4e-128 462.6 333 70.3
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 7.0e-128 461.1 333 70.6
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.2e-127 460.3 329 71.4
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 3.5e-127 458.8 304 74.0
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 3.5e-127 458.8 331 71.0
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 7.7e-127 457.6 330 70.6
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 2.9e-126 455.7 305 75.7
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.9e-126 455.7 363 66.1
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.1e-125 453.8 326 70.6
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 4.2e-125 451.8 326 69.9
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 7.2e-125 451.1 325 70.2
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 9.5e-125 450.7 344 69.2
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 2.1e-124 449.5 313 73.5
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 3.6e-124 448.7 331 68.9
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 6.1e-124 448.0 328 69.2
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 2.3e-123 446.0 322 70.5
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 2.0e-122 443.0 329 68.7
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.0e-122 443.0 320 69.4
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 5.7e-122 441.4 305 73.4
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.2e-121 439.5 322 69.6
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 9.2e-120 434.1 295 74.2
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.3e-117 425.6 335 66.0
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.3e-117 425.6 366 62.3
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 1.2e-116 423.7 360 62.8
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.8e-115 419.9 335 66.0
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 4.0e-115 418.7 316 67.1
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 6.8e-115 417.9 295 71.2
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 8.9e-115 417.5 277 78.7
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 2.6e-114 416.0 305 72.5
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 5.8e-114 414.8 285 73.3
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 4.9e-113 411.8 350 62.9
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 4.9e-113 411.8 350 62.9
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 2.4e-112 409.5 351 63.2
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 2.4e-112 409.5 331 66.5
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 3.5e-111 405.6 324 64.2
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 4.6e-111 405.2 284 73.2
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.3e-110 402.9 267 73.4
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 9.5e-109 397.5 373 58.7
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 1.6e-108 396.7 324 62.3
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 9.8e-106 387.5 302 65.6
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 7.1e-104 381.3 288 68.1
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 4.6e-103 378.6 288 68.1
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 7.8e-103 377.9 307 61.6
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 3.0e-102 375.9 319 58.3
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 8.6e-102 374.4 371 57.4
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 6.8e-99 364.8 259 71.0
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 2.0e-98 363.2 327 56.6
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.3e-97 360.5 318 60.4
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 1.3e-97 360.5 280 64.6
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 3.3e-93 345.9 321 54.8
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 5.6e-93 345.1 324 55.9
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 8.1e-92 341.3 288 62.2
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 2.0e-90 336.7 306 58.2
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 7.1e-88 328.2 233 73.4
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 3.6e-84 315.8 314 51.3
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.8e-83 313.5 273 62.3
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 2.9e-81 306.2 225 67.1
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 4.9e-81 305.4 288 59.7
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.7e-73 280.4 250 58.8
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 2.9e-73 279.6 230 60.0
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 1.4e-72 277.3 166 86.7
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 7.1e-72 275.0 225 65.3
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.3e-70 270.8 224 61.2
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 2.1e-60 236.9 368 39.9
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.5e-53 214.2 181 61.9
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.5e-48 196.8 143 69.2
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 2.6e-42 176.8 129 66.7
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 1.0e-41 174.9 328 35.7
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 5.0e-33 146.0 90 71.1
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.7e-28 131.0 282 33.0
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 5.0e-17 92.8 97 53.6
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 7.2e-16 89.0 71 60.6
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 2.3e-14 84.0 42 85.7
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.3e-12 78.2 70 61.4
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.6e-07 61.2 59 50.8


User provided reference genes

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