Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G188400 Phaseolus vulgaris HOM05D008554 ORTHO05D010491 2.0e-12 74.3 35 100.0
Gohir.D03G161401 Gossypium hirsutum HOM05D008554 ORTHO05D010491 6.1e-09 62.8 30 93.3
arahy.Tifrunner.gnm1.ann1.J0VL89 Arachis hypogaea HOM05D008554 ORTHO05D010491 1.0e-08 62.0 31 90.3
Migut.D01663 Erythranthe guttata HOM05D008554 ORTHO05D010491 1.8e-08 61.2 29 93.1
Gohir.D01G042774 Gossypium hirsutum HOM05D008554 ORTHO05D010491 2.3e-08 60.8 30 90.0
CiPaw.11G127600 Carya illinoinensis HOM05D008554 ORTHO05D010491 3.1e-08 60.5 27 100.0
Gohir.D12G109633 Gossypium hirsutum HOM05D008554 ORTHO05D010491 3.1e-08 60.5 29 89.7
Phvul.003G153600 Phaseolus vulgaris HOM05D008554 ORTHO05D010491 4.0e-08 60.1 31 83.9
Potri.002G031550 Populus trichocarpa HOM05D008554 ORTHO05D010491 4.0e-08 60.1 34 76.5
Gohir.A12G105800 Gossypium hirsutum HOM05D008554 ORTHO05D010491 5.2e-08 59.7 31 87.1
Prupe.1G364100 Prunus persica HOM05D008554 ORTHO05D010491 6.8e-08 59.3 27 96.3
GSVIVG01027011001 Vitis vinifera HOM05D008554 ORTHO05D010491 6.8e-08 59.3 27 96.3
Manes.01G051334 Manihot esculenta HOM05D008554 ORTHO05D010491 1.2e-07 58.5 29 89.7
Gohir.A11G288000 Gossypium hirsutum HOM05D008554 ORTHO05D010491 1.5e-07 58.2 31 87.1
Medtr5g083700 Medicago truncatula HOM05D008554 ORTHO05D010491 1.5e-07 58.2 26 100.0
Medtr8g021160 Medicago truncatula HOM05D008554 ORTHO05D010491 1.5e-07 58.2 26 100.0
Gohir.A01G003437 Gossypium hirsutum HOM05D008554 ORTHO05D010491 2.0e-07 57.8 27 96.3
Gohir.D01G003150 Gossypium hirsutum HOM05D008554 ORTHO05D010491 2.0e-07 57.8 27 96.3
GSVIVG01028886001 Vitis vinifera HOM05D008554 ORTHO05D010491 2.0e-07 57.8 27 96.3
Gohir.A11G287682 Gossypium hirsutum HOM05D008554 ORTHO05D010491 2.6e-07 57.4 31 80.6
Glyma.18G073000 Glycine max HOM05D008554 ORTHO05D010491 3.4e-07 57.0 32 78.1
Gohir.A03G213350 Gossypium hirsutum HOM05D008554 ORTHO05D010491 3.4e-07 57.0 26 96.2
Gorai.005G262900 Gossypium raimondii HOM05D008554 ORTHO05D010491 3.4e-07 57.0 26 96.2
Nn2g11776 Nelumbo nucifera HOM05D008554 ORTHO05D010491 3.4e-07 57.0 27 92.6
GSVIVG01035751001 Vitis vinifera HOM05D008554 ORTHO05D010491 3.4e-07 57.0 33 81.8
Gohir.A03G009450 Gossypium hirsutum HOM05D008554 ORTHO05D010491 4.4e-07 56.6 26 96.2
Phvul.008G206814 Phaseolus vulgaris HOM05D008554 ORTHO05D010491 4.4e-07 56.6 26 96.2
Potri.001G106951 Populus trichocarpa HOM05D008554 ORTHO05D010491 4.4e-07 56.6 31 83.9
Cc02_g21080 Coffea canephora HOM05D008554 ORTHO05D010491 9.8e-07 55.5 26 96.2
Cc08_g08600 Coffea canephora HOM05D008554 ORTHO05D010491 9.8e-07 55.5 26 96.2
Gohir.A07G024450 Gossypium hirsutum HOM05D008554 ORTHO05D010491 9.8e-07 55.5 26 96.2
Gorai.010G109000 Gossypium raimondii HOM05D008554 ORTHO05D010491 9.8e-07 55.5 26 96.2
Manes.15G066950 Manihot esculenta HOM05D008554 ORTHO05D010491 9.8e-07 55.5 26 96.2
GSVIVG01019443001 Vitis vinifera HOM05D008554 ORTHO05D010491 9.8e-07 55.5 26 96.2
GSVIVG01025292001 Vitis vinifera HOM05D008554 ORTHO05D010491 9.8e-07 55.5 26 96.2
Gohir.D02G234850 Gossypium hirsutum HOM05D008554 ORTHO05D010491 1.3e-06 55.1 26 88.5
Nn5g28725 Nelumbo nucifera HOM05D008554 ORTHO05D010491 1.3e-06 55.1 29 82.8
AL7G47780 Arabidopsis lyrata HOM05D008554 ORTHO05D010491 4.9e-06 53.1 27 85.2
Migut.A00254 Erythranthe guttata HOM05D008554 ORTHO05D010491 4.9e-06 53.1 31 77.4
Prupe.1G392700 Prunus persica HOM05D008554 ORTHO05D010491 4.9e-06 53.1 30 80.0
Migut.D01662 Erythranthe guttata HOM05D008554 ORTHO05D189502 6.4e-06 52.8 24 95.8
Nn7g37318 Nelumbo nucifera HOM05D008554 ORTHO05D010491 6.4e-06 52.8 26 92.3
Pp3c12_24460 Physcomitrium patens HOM05D013365 ORTHO05D010491 6.4e-06 52.8 27 85.2
Pp3c12_24461 Physcomitrium patens HOM05D013365 ORTHO05D010491 6.4e-06 52.8 27 85.2
Pp3c19_8060 Physcomitrium patens HOM05D013365 ORTHO05D010491 6.4e-06 52.8 31 74.2
Pp3c19_8062 Physcomitrium patens HOM05D013365 ORTHO05D010491 6.4e-06 52.8 31 74.2
SHI13350 Sapria himalayana HOM05D008554 ORTHO05D010491 6.4e-06 52.8 26 88.5


User provided reference genes

Program Settings