Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 2.4e-218 761.9 395 100.0
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 7.5e-204 713.8 395 93.2
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 6.4e-195 684.1 395 88.6
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 1.2e-193 679.9 395 88.4
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 2.1e-177 625.9 401 80.8
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.2e-169 600.1 401 76.1
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 3.0e-168 595.5 403 75.7
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 2.8e-166 589.0 401 76.3
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 6.6e-160 567.8 422 69.7
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 1.2e-148 530.4 395 68.1
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 1.4e-146 523.5 398 68.6
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 1.2e-145 520.4 396 68.2
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 7.9e-145 517.7 397 67.0
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 2.3e-144 516.2 402 66.2
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 7.4e-143 511.1 399 63.4
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 1.3e-142 510.4 399 67.2
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 2.8e-142 509.2 397 67.5
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.4e-141 506.9 399 62.9
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 4.0e-141 505.4 399 67.2
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 7.6e-140 501.1 406 65.8
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 8.4e-139 497.7 404 63.6
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 8.4e-139 497.7 414 64.3
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 5.5e-138 495.0 405 65.4
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.7e-137 492.7 399 62.4
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 4.6e-137 491.9 409 65.0
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 7.9e-137 491.1 395 62.8
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 1.3e-136 490.3 399 65.7
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 6.7e-136 488.0 384 66.1
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 8.7e-136 487.6 394 62.7
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 8.7e-136 487.6 404 62.1
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 1.1e-135 487.3 411 64.2
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 3.3e-135 485.7 401 66.8
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 1.6e-134 483.4 398 62.1
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.1e-133 480.7 408 61.3
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 2.4e-133 479.6 397 63.2
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.4e-133 479.6 400 61.5
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.2e-132 477.2 413 59.8
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 5.5e-130 468.4 399 61.7
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.6e-129 466.8 377 65.3
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 7.9e-129 464.5 400 61.5
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 2.3e-128 463.0 414 60.1
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 6.7e-128 461.5 410 60.5
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 8.8e-128 461.1 390 62.1
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 8.8e-128 461.1 396 63.6
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 1.5e-127 460.3 406 60.1
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 7.4e-127 458.0 406 57.9
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 2.2e-126 456.4 408 60.0
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 2.8e-126 456.1 402 60.9
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 2.8e-126 456.1 387 62.5
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 6.3e-126 454.9 369 65.6
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.4e-125 453.0 367 65.1
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 5.3e-125 451.8 404 58.4
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 1.2e-124 450.7 408 60.3
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 1.5e-124 450.3 400 62.0
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 4.5e-124 448.7 404 57.7
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 1.0e-123 447.6 405 60.0
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 1.0e-123 447.6 404 57.4
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 1.7e-123 446.8 402 59.7
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 3.8e-123 445.7 403 59.6
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 9.4e-122 441.0 402 58.7
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.2e-121 440.7 407 57.5
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 6.1e-121 438.3 388 61.1
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 7.9e-121 438.0 404 58.4
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.0e-120 437.6 390 58.5
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 5.7e-119 431.8 397 58.9
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 5.7e-119 431.8 397 58.9
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 5.7e-119 431.8 397 58.9
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 7.4e-119 431.4 390 57.7
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 1.3e-118 430.6 431 56.1
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 1.7e-118 430.3 394 58.6
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 2.2e-118 429.9 402 58.7
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 3.7e-118 429.1 396 58.8
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 9.1e-117 424.5 390 57.7
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 1.2e-116 424.1 382 58.9
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.3e-115 420.6 402 57.7
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.8e-115 419.1 402 57.5
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 3.2e-114 416.0 395 55.7
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 3.2e-114 416.0 288 69.8
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 9.4e-114 414.5 403 53.1
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 9.4e-114 414.5 271 73.1
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 7.4e-111 404.8 374 53.7
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 4.1e-109 399.1 374 54.0
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 2.0e-108 396.7 324 65.7
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 3.5e-108 396.0 401 56.6
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 4.5e-108 395.6 360 57.5
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 8.5e-107 391.3 399 53.4
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.2e-105 387.5 324 63.0
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 4.7e-105 385.6 393 53.4
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 1.5e-103 380.6 242 75.6
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 9.7e-103 377.9 245 73.1
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 3.7e-102 375.9 396 50.8
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 5.9e-100 368.6 325 56.0
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 7.7e-100 368.2 290 62.4
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 3.1e-93 346.3 327 52.6
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 5.4e-93 345.5 356 54.8
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 1.5e-90 337.4 215 75.8
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.7e-78 297.4 399 44.4
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 6.0e-60 235.7 150 71.3
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 1.9e-53 214.2 389 33.9
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 1.1e-50 204.9 327 36.4
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 4.7e-49 199.5 241 49.8
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 3.5e-44 183.3 269 37.2
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 3.5e-44 183.3 131 65.6
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 3.5e-44 183.3 131 65.6
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 1.7e-43 181.0 272 37.1
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 5.3e-40 169.5 201 51.2
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 4.9e-38 162.9 119 68.9
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 3.0e-35 153.7 160 51.2
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 9.0e-32 142.1 199 45.2
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 3.5e-28 130.2 97 66.0
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 6.7e-27 125.9 181 42.0
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 7.4e-26 122.5 278 31.3
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 4.8e-17 93.2 208 30.3
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.7e-09 68.2 223 27.8
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 2.2e-09 67.8 94 45.7
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 8.2e-09 65.9 92 45.7


User provided reference genes

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