Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G182066 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 4.4e-192 674.5 342 100.0
Phvul.011G182000 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 1.2e-186 656.4 342 97.7
VMungo1127G1558 Vigna mungo HOM05D005549 ORTHO05D006771 3.1e-166 588.6 347 86.7
Glyma.09G077900 Glycine max HOM05D005549 ORTHO05D006771 8.6e-164 580.5 347 85.6
Glyma.15G218700 Glycine max HOM05D005549 ORTHO05D006771 9.5e-163 577.0 347 85.3
Medtr5g096040 Medicago truncatula HOM05D005549 ORTHO05D006771 4.4e-152 541.6 344 79.4
TPR.G8611 Trifolium pratense HOM05D005549 ORTHO05D006771 3.2e-150 535.4 347 78.7
Ca_06401_v3 Cicer arietinum L. HOM05D005549 ORTHO05D006771 4.1e-150 535.0 347 79.3
LjContig00081g0017630 Lotus japonicus HOM05D005549 ORTHO05D006771 1.9e-147 526.2 347 77.5
arahy.Tifrunner.gnm1.ann1.386HL4 Arachis hypogaea HOM05D005549 ORTHO05D006771 8.1e-146 520.8 352 76.7
arahy.Tifrunner.gnm1.ann1.7VTX70 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.4e-145 520.0 352 76.4
Lalb_Chr04g0247841 Lupinus albus HOM05D005549 ORTHO05D006771 1.8e-145 519.6 347 77.5
Psat2g007040 Pisum sativum HOM05D005549 ORTHO05D006771 3.1e-145 518.8 347 76.7
arahy.Tifrunner.gnm1.ann1.BH3JLW Arachis hypogaea HOM05D005549 ORTHO05D006771 9.2e-142 507.3 341 76.8
Dinv38568 Davidia involucrata HOM05D005549 ORTHO05D006771 1.8e-129 466.5 347 63.7
Haze_07531 Corylus avellana HOM05D005549 ORTHO05D006771 2.0e-128 463.0 338 65.4
Actinidia19108 Actinidia chinensis HOM05D005549 ORTHO05D006771 3.8e-127 458.8 358 61.2
QL10p009538 Quercus lobata HOM05D005549 ORTHO05D006771 1.4e-126 456.8 346 63.9
Rhsim12G0166100 Rhododendron simsii HOM05D005549 ORTHO05D006771 1.9e-126 456.4 358 60.9
Duzib205G0052 Durio zibethinus HOM05D005549 ORTHO05D006771 2.4e-126 456.1 346 62.4
FAN08G3612 Fragaria x ananassa HOM05D005549 ORTHO05D006771 2.4e-126 456.1 347 63.1
Sabra14G0003300 Salix brachista HOM05D005549 ORTHO05D006771 7.1e-126 454.5 345 60.3
Manes.06G106600 Manihot esculenta HOM05D005549 ORTHO05D006771 9.3e-126 454.1 344 64.0
Thecc.03G015300 Theobroma cacao HOM05D005549 ORTHO05D006771 1.6e-125 453.4 347 62.5
vmacro16625 Vaccinium macrocarpon HOM05D005549 ORTHO05D006771 4.6e-125 451.8 355 61.4
Gohir.A09G171200 Gossypium hirsutum HOM05D005549 ORTHO05D006771 6.0e-125 451.4 342 62.6
FvH4_5g05540 Fragaria vesca HOM05D005549 ORTHO05D006771 7.8e-125 451.1 347 62.5
FAN18G0652 Fragaria x ananassa HOM05D005549 ORTHO05D006771 7.8e-125 451.1 347 62.5
Potri.014G000900 Populus trichocarpa HOM05D005549 ORTHO05D006771 5.1e-124 448.4 345 60.3
PGSC0003DMG400028373 Solanum tuberosum HOM05D005549 ORTHO05D006771 6.6e-124 448.0 341 61.3
FAN18G1717 Fragaria x ananassa HOM05D005549 ORTHO05D006771 8.7e-124 447.6 347 62.2
Prupe.5G171000 Prunus persica HOM05D005549 ORTHO05D006771 2.5e-123 446.0 339 62.8
RcHm_v2.0_Chr7g0193241 Rosa chinensis HOM05D005549 ORTHO05D006771 2.5e-123 446.0 346 62.1
Gorai.006G188700 Gossypium raimondii HOM05D005549 ORTHO05D006771 3.3e-123 445.7 342 62.3
MD06G1171600 Malus domestica HOM05D005549 ORTHO05D006771 5.6e-123 444.9 344 60.5
Cc04_g12210 Coffea canephora HOM05D005549 ORTHO05D006771 7.3e-123 444.5 346 62.4
CiPaw.11G024000 Carya illinoinensis HOM05D005549 ORTHO05D006771 2.8e-122 442.6 343 61.5
Gohir.D09G166900 Gossypium hirsutum HOM05D005549 ORTHO05D006771 2.8e-122 442.6 341 62.2
Atru.chr9.2502 Acer truncatum HOM05D005549 ORTHO05D006771 5.3e-121 438.3 346 59.8
TAR622G1114 Trochodendron aralioides HOM05D005549 ORTHO05D006771 5.3e-121 438.3 348 59.2
Ciclev10020953m.g Citrus clementina HOM05D005549 ORTHO05D006771 9.0e-121 437.6 345 60.9
Aqoxy3G02864 Aquilegia oxysepala HOM05D005549 ORTHO05D006771 1.2e-120 437.2 335 65.4
COL.COLO4_30080 Corchorus olitorius HOM05D005549 ORTHO05D006771 1.5e-120 436.8 346 65.3
Nn4g25809 Nelumbo nucifera HOM05D005549 ORTHO05D006771 1.5e-120 436.8 348 58.3
Sopen05g007130 Solanum pennellii HOM05D005549 ORTHO05D006771 2.0e-120 436.4 341 59.2
Sopen05g007150 Solanum pennellii HOM05D005549 ORTHO05D006771 2.6e-120 436.0 335 60.3
Hma1.2p1_0046F.1_g026660 Hydrangea macrophylla HOM05D005549 ORTHO05D006771 3.4e-120 435.6 395 55.2
Peaxi162Scf00075g00159 Petunia axillaris HOM05D005549 ORTHO05D006771 7.6e-120 434.5 346 60.4
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 4.9e-119 431.8 315 69.8
CANSAT25G1426 Cannabis sativa HOM05D005549 ORTHO05D006771 6.4e-119 431.4 346 64.2
CsaV3_1G001440 Cucumis sativus L. HOM05D005549 ORTHO05D006771 9.3e-118 427.6 346 66.8
Eucgr.H00383 Eucalyptus grandis HOM05D005549 ORTHO05D006771 4.6e-117 425.2 342 62.9
TWI14G0382 Tripterygium wilfordii HOM05D005549 ORTHO05D006771 4.6e-117 425.2 341 60.1
PGR031G3229 Punica granatum HOM05D005549 ORTHO05D006771 2.5e-115 419.5 347 62.0
FAN13G1520 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.4e-113 413.7 345 58.8
Sc12g0005230 Simmondsia chinensis HOM05D005549 ORTHO05D006771 1.8e-113 413.3 343 60.3
Hund09451 Selenicereus undatus HOM05D005549 ORTHO05D006771 2.4e-113 412.9 347 57.6
AL8G40040 Arabidopsis lyrata HOM05D005549 ORTHO05D006771 4.0e-113 412.1 336 63.7
MBI16_g05472_MAGBIO Magnolia biondii HOM05D005549 ORTHO05D006771 4.0e-113 412.1 342 59.4
Lj3C19G0 Lonicera japonica HOM05D005549 ORTHO05D006771 5.3e-113 411.8 348 63.2
Peaxi162Scf00141g00210 Petunia axillaris HOM05D005549 ORTHO05D006771 2.6e-112 409.5 344 57.6
Aa31LG11G650 Aethionema arabicum HOM05D005549 ORTHO05D006771 7.6e-112 407.9 341 57.2
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 9.9e-112 407.5 337 57.6
ClCG06G017070 Citrullus lanatus HOM05D005549 ORTHO05D006771 1.3e-111 407.1 345 63.8
Oeu024700.1 Olea europaea HOM05D005549 ORTHO05D006771 1.7e-111 406.8 349 64.2
MSTRG.26261 Avicennia marina HOM05D005549 ORTHO05D006771 2.9e-111 406.0 342 57.6
DCAR_016476 Daucus carota HOM05D005549 ORTHO05D006771 2.9e-111 406.0 344 62.8
MELO3C017092.2 Cucumis melo HOM05D005549 ORTHO05D006771 3.8e-111 405.6 345 64.3
CARHR276820 Cardamine hirsuta HOM05D005549 ORTHO05D006771 4.9e-111 405.2 341 56.6
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 6.4e-111 404.8 336 58.0
PSO478G4565 Papaver somniferum HOM05D005549 ORTHO05D006771 2.4e-110 402.9 348 61.8
Carub.0008s2372 Capsella rubella HOM05D005549 ORTHO05D006771 3.2e-110 402.5 336 58.0
AT5G63010 Arabidopsis thaliana HOM05D005549 ORTHO05D006771 4.2e-110 402.1 341 58.7
Sp2g26140 Schrenkiella parvula HOM05D005549 ORTHO05D006771 1.2e-109 400.6 336 56.8
EL10Ac5g10725 Beta vulgaris HOM05D005549 ORTHO05D006771 2.1e-109 399.8 346 56.9
Thhalv10004522m.g Eutrema salsugineum HOM05D005549 ORTHO05D006771 4.6e-109 398.7 336 56.8
Sed0023293 Sechium edule HOM05D005549 ORTHO05D006771 7.9e-109 397.9 346 62.7
Ah.02g110600 Amaranthus hybridus HOM05D005549 ORTHO05D006771 3.9e-108 395.6 347 62.5
BraA06t25926Z Brassica rapa HOM05D005549 ORTHO05D006771 3.3e-107 392.5 335 62.1
BcaC01g02548 Brassica carinata HOM05D005549 ORTHO05D006771 4.3e-107 392.1 334 62.0
C03p63600 Brassica napus HOM05D005549 ORTHO05D006771 4.3e-107 392.1 334 62.0
BolC3t18618H Brassica oleracea HOM05D005549 ORTHO05D006771 4.3e-107 392.1 334 62.0
Migut.K00304 Erythranthe guttata HOM05D005549 ORTHO05D006771 5.6e-107 391.7 350 55.4
ECA232G3151 Erigeron canadensis HOM05D005549 ORTHO05D006771 3.7e-106 389.0 345 62.0
AUR62008189 Chenopodium quinoa HOM05D005549 ORTHO05D006771 6.2e-106 388.3 348 55.2
FAN04G2905 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.1e-105 387.5 349 55.9
BcaB02g09715 Brassica carinata HOM05D005549 ORTHO05D006771 4.0e-105 385.6 344 60.8
A06p29790 Brassica napus HOM05D005549 ORTHO05D006771 2.6e-104 382.9 335 61.5
unitig_37.g12682 Utricularia gibba HOM05D005549 ORTHO05D006771 9.3e-102 374.4 340 54.4
Zm00001eb426250 Zea mays HOM05D005549 ORTHO05D006771 2.7e-101 372.9 345 53.6
THA.LOC104818503 Tarenaya hassleriana HOM05D005549 ORTHO05D006771 7.9e-101 371.3 324 61.1
SGA_v2.0_scaffold293G47425 Striga asiatica HOM05D005549 ORTHO05D006771 5.1e-100 368.6 341 60.1
Lsat_1_v5_gn_4_75780 Lactuca sativa HOM05D005549 ORTHO05D006771 6.7e-100 368.2 346 59.2
Glyma.08G230900 Glycine max HOM05D005549 ORTHO05D006771 1.9e-99 366.7 225 87.1
SHI17110 Sapria himalayana HOM05D005549 ORTHO05D006771 6.3e-98 361.7 337 53.7
Os04g0507900 Oryza sativa ssp. japonica HOM05D005549 ORTHO05D006771 2.4e-97 359.8 347 51.6
Eucgr.C01244 Eucalyptus grandis HOM05D005549 ORTHO05D006771 1.1e-91 340.9 340 50.0
arahy.Tifrunner.gnm1.ann1.BVT45G Arachis hypogaea HOM05D005549 ORTHO05D006771 3.1e-89 332.8 236 76.3
HPP92_021890 Vanilla planifolia HOM05D005549 ORTHO05D006771 8.5e-87 324.7 343 53.6
arahy.Tifrunner.gnm1.ann1.8228C9 Arachis hypogaea HOM05D005549 ORTHO05D006771 2.7e-85 319.7 211 81.0
arahy.Tifrunner.gnm1.ann1.DCL1V8 Arachis hypogaea HOM05D005549 ORTHO05D006771 2.7e-85 319.7 211 81.0
HanXRQChr09g0272091 Helianthus annuus HOM05D005549 ORTHO05D006771 6.3e-82 308.5 275 62.2
CDE02G3271 Ceratophyllum demersum HOM05D005549 ORTHO05D006771 3.1e-81 306.2 335 48.1
Cpa.g.c31519.1 Carica papaya HOM05D005549 ORTHO05D006771 4.2e-78 295.8 239 57.3
Solyc05g012300.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 5.2e-76 288.9 217 59.0
Solyc05g012320.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 9.7e-75 284.6 211 59.7
SMO367G1205 Selaginella moellendorffii HOM05D005549 ORTHO05D006771 2.0e-72 276.9 340 43.2
Pp3c9_15370 Physcomitrium patens HOM05D005549 ORTHO05D006771 8.5e-71 271.6 343 41.1
Potri.012G087300 Populus trichocarpa HOM05D005549 ORTHO05D006771 4.2e-70 269.2 216 58.3
Atru.chr9.2510 Acer truncatum HOM05D005549 ORTHO05D006771 1.2e-69 267.7 208 60.1
Mapoly0027s0008 Marchantia polymorpha HOM05D005549 ORTHO05D006771 1.7e-66 257.3 378 37.8
ECA232G2898 Erigeron canadensis HOM05D005549 ORTHO05D006771 1.1e-65 254.6 222 63.5
CSS0043757 Camellia sinensis var. sinensis HOM05D005549 ORTHO05D006771 7.0e-65 251.9 223 55.6
AUR62030941 Chenopodium quinoa HOM05D005549 ORTHO05D006771 2.0e-64 250.4 216 55.1
ATR0807G008 Amborella trichopoda HOM05D005549 ORTHO05D006771 1.7e-63 247.3 221 49.8
Peaxi162Scf00141g10027 Petunia axillaris HOM05D005549 ORTHO05D006771 1.0e-60 238.0 185 58.4
AagrBONN_evm.TU.Sc2ySwM_228.3282 Anthoceros agrestis HOM05D005549 ORTHO05D006771 3.5e-56 223.0 373 35.1
HanXRQChr16g0506951 Helianthus annuus HOM05D005549 ORTHO05D006771 1.6e-53 214.2 190 54.2
Gorai.001G151900 Gossypium raimondii HOM05D005549 ORTHO05D006771 1.4e-52 211.1 186 58.6
HanXRQChr04g0107691 Helianthus annuus HOM05D005549 ORTHO05D006771 3.0e-52 209.9 182 66.5
Gohir.D07G139801 Gossypium hirsutum HOM05D005549 ORTHO05D006771 5.7e-51 205.7 186 57.5
MD14G1177100 Malus domestica HOM05D005549 ORTHO05D006771 5.9e-48 195.7 220 48.6
MD06G1171300 Malus domestica HOM05D005549 ORTHO05D006771 1.0e-47 194.9 315 35.2
CBR_g24288 Chara braunii HOM05D005549 ORTHO05D006771 2.9e-47 193.4 512 28.5
Eucgr.H00387 Eucalyptus grandis HOM05D005549 ORTHO05D006771 3.8e-47 193.0 201 48.3
Cre10.g434300 Chlamydomonas reinhardtii HOM05D005549 ORTHO05D006771 4.1e-33 146.4 299 37.5
TPR.G8752 Trifolium pratense HOM05D005549 ORTHO05D006771 4.1e-33 146.4 87 79.3
Atru.chr9.2511 Acer truncatum HOM05D005549 ORTHO05D006771 3.5e-32 143.3 111 60.4
Gohir.D12G085501 Gossypium hirsutum HOM05D005549 ORTHO05D006771 2.3e-28 130.6 140 50.7
Sabra12G0062500 Salix brachista HOM05D005549 ORTHO05D006771 1.5e-27 127.9 134 50.0
ATR0807G036 Amborella trichopoda HOM05D005549 ORTHO05D006771 2.1e-24 117.5 100 55.0
MCO16G545 Micromonas commoda HOM05D005549 ORTHO05D006771 8.6e-23 112.1 352 28.1
PRCOL_00001377 Prasinoderma coloniale HOM05D005549 ORTHO05D006771 8.6e-23 112.1 353 28.6
Cpa.g.c31519.2 Carica papaya HOM05D005549 ORTHO05D006771 1.5e-22 111.3 85 63.5
Lj5C126T17 Lonicera japonica HOM05D005549 ORTHO05D006771 1.7e-15 87.8 96 51.0
Nitab4.5_0003499g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 3.3e-14 83.6 99 45.5
MD14G1177000 Malus domestica HOM05D005549 ORTHO05D006771 2.0e-11 74.3 62 51.6


User provided reference genes

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