Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G172200 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 3.2e-181 638.3 317 100.0
Lj3g0001252 Lotus japonicus HOM05D003958 ORTHO05D004864 1.7e-158 562.8 308 89.3
Lalb_Chr03g0031671 Lupinus albus HOM05D003958 ORTHO05D004864 4.2e-157 558.1 308 87.7
Lj2g0025561 Lotus japonicus HOM05D003958 ORTHO05D004864 6.7e-155 550.8 308 87.0
Ca_00876_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 2.0e-154 549.3 306 87.9
TPR.G33516 Trifolium pratense HOM05D003958 ORTHO05D004864 9.7e-154 547.0 311 86.5
TPR.G11724 Trifolium pratense HOM05D003958 ORTHO05D004864 4.8e-153 544.7 313 84.7
Ca_00369_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 8.2e-153 543.9 307 86.0
Psat1g092800 Pisum sativum HOM05D003958 ORTHO05D004864 1.4e-152 543.1 309 87.4
arahy.Tifrunner.gnm1.ann1.CB8F3G Arachis hypogaea HOM05D003958 ORTHO05D004864 3.1e-152 542.0 309 86.4
arahy.Tifrunner.gnm1.ann1.38SPRB Arachis hypogaea HOM05D003958 ORTHO05D004864 1.3e-150 536.6 309 85.4
Psat1g202680 Pisum sativum HOM05D003958 ORTHO05D004864 4.7e-148 528.1 310 83.9
Medtr6g047800 Medicago truncatula HOM05D003958 ORTHO05D004864 1.2e-146 523.5 308 85.7
Glyma.13G234900 Glycine max HOM05D003958 ORTHO05D004864 1.1e-144 516.9 311 83.9
VMungo0540G0822 Vigna mungo HOM05D003958 ORTHO05D004864 1.4e-144 516.5 309 81.9
Phvul.006G181700 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 1.8e-144 516.2 310 81.9
Glyma.15G078000 Glycine max HOM05D003958 ORTHO05D004864 1.2e-140 503.4 310 81.6
CSS0020788 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 2.1e-140 502.7 310 81.6
CSS0020854 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 2.1e-140 502.7 310 81.6
Eucgr.I01766 Eucalyptus grandis HOM05D003958 ORTHO05D004864 8.0e-140 500.7 307 79.5
Duzib147G0566 Durio zibethinus HOM05D003958 ORTHO05D004864 2.3e-139 499.2 311 79.7
Duzib147G0735 Durio zibethinus HOM05D003958 ORTHO05D004864 8.8e-139 497.3 311 79.1
Nn7g37719 Nelumbo nucifera HOM05D003958 ORTHO05D004864 2.0e-138 496.1 310 77.7
CANSAT64G0951 Cannabis sativa HOM05D003958 ORTHO05D004864 2.6e-138 495.7 314 78.3
DCAR_009028 Daucus carota HOM05D003958 ORTHO05D004864 3.4e-138 495.4 310 78.4
Duzib147G0897 Durio zibethinus HOM05D003958 ORTHO05D004864 4.4e-138 495.0 308 80.5
Haze_14701 Corylus avellana HOM05D003958 ORTHO05D004864 5.7e-138 494.6 310 78.7
Manes.17G113700 Manihot esculenta HOM05D003958 ORTHO05D004864 1.3e-137 493.4 309 78.6
QL02p075632 Quercus lobata HOM05D003958 ORTHO05D004864 1.3e-137 493.4 310 77.7
TAR622G1043 Trochodendron aralioides HOM05D003958 ORTHO05D004864 1.3e-137 493.4 310 80.3
Lj7A595G65 Lonicera japonica HOM05D003958 ORTHO05D004864 1.7e-137 493.0 315 80.0
Atru.chr6.2341 Acer truncatum HOM05D003958 ORTHO05D004864 2.2e-137 492.7 311 78.8
Aqoxy3G00906 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 2.2e-137 492.7 314 77.1
CiPaw.03G040700 Carya illinoinensis HOM05D003958 ORTHO05D004864 6.3e-137 491.1 310 78.1
Peaxi162Scf00129g01325 Petunia axillaris HOM05D003958 ORTHO05D004864 6.3e-137 491.1 308 80.2
Sed0009763 Sechium edule HOM05D003958 ORTHO05D004864 6.3e-137 491.1 309 78.6
CiPaw.04G026700 Carya illinoinensis HOM05D003958 ORTHO05D004864 1.1e-136 490.3 311 78.8
Thecc.04G013700 Theobroma cacao HOM05D003958 ORTHO05D004864 1.1e-136 490.3 311 77.8
Aqoxy2G00425 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 1.8e-136 489.6 311 77.8
COL.COLO4_29053 Corchorus olitorius HOM05D003958 ORTHO05D004864 1.8e-136 489.6 309 78.0
ClCG01G008920 Citrullus lanatus HOM05D003958 ORTHO05D004864 2.4e-136 489.2 309 77.7
Hund02774 Selenicereus undatus HOM05D003958 ORTHO05D004864 2.4e-136 489.2 310 78.7
MBI05_g22036_MAGBIO Magnolia biondii HOM05D003958 ORTHO05D004864 4.1e-136 488.4 309 77.7
Cc02_g12190 Coffea canephora HOM05D003958 ORTHO05D004864 1.6e-135 486.5 311 76.8
CsaV3_1G037790 Cucumis sativus L. HOM05D003958 ORTHO05D004864 1.6e-135 486.5 310 77.4
Prupe.3G287900 Prunus persica HOM05D003958 ORTHO05D004864 2.0e-135 486.1 310 77.7
CAN.G206.10 Capsicum annuum HOM05D003958 ORTHO05D004864 2.7e-135 485.7 312 79.2
FvH4_6g51011 Fragaria vesca HOM05D003958 ORTHO05D004864 3.5e-135 485.3 310 77.4
Nitab4.5_0002739g0040 Nicotiana tabacum HOM05D003958 ORTHO05D004864 4.5e-135 485.0 312 78.8
Ciclev10016011m.g Citrus clementina HOM05D003958 ORTHO05D004864 5.9e-135 484.6 310 77.1
PGSC0003DMG400000483 Solanum tuberosum HOM05D003958 ORTHO05D004864 7.7e-135 484.2 312 79.5
Oeu057051.1 Olea europaea HOM05D003958 ORTHO05D004864 1.0e-134 483.8 310 77.7
PGR054G0003 Punica granatum HOM05D003958 ORTHO05D004864 1.0e-134 483.8 310 76.5
vmacro18265 Vaccinium macrocarpon HOM05D003958 ORTHO05D004864 1.0e-134 483.8 329 75.1
PSO832G3613 Papaver somniferum HOM05D003958 ORTHO05D004864 1.3e-134 483.4 311 78.1
RcHm_v2.0_Chr2g0172551 Rosa chinensis HOM05D003958 ORTHO05D004864 1.3e-134 483.4 303 78.9
Nitab4.5_0008215g0010 Nicotiana tabacum HOM05D003958 ORTHO05D004864 2.3e-134 482.6 309 79.3
PSO063G1059 Papaver somniferum HOM05D003958 ORTHO05D004864 2.3e-134 482.6 311 78.1
Sopen02g031390 Solanum pennellii HOM05D003958 ORTHO05D004864 2.9e-134 482.3 312 78.5
MELO3C021808.2 Cucumis melo HOM05D003958 ORTHO05D004864 3.8e-134 481.9 316 75.3
PGR119G1149 Punica granatum HOM05D003958 ORTHO05D004864 5.0e-134 481.5 310 76.1
Gorai.006G031600 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.9e-133 479.6 305 78.0
Lju41A38T12 Lonicera japonica HOM05D003958 ORTHO05D004864 1.9e-133 479.6 311 78.8
Gohir.D09G027100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.3e-133 478.8 305 78.0
MSTRG.3157 Avicennia marina HOM05D003958 ORTHO05D004864 4.3e-133 478.4 310 77.7
Gohir.D13G007800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.8e-132 475.7 307 76.5
Sabra18G0098500 Salix brachista HOM05D003958 ORTHO05D004864 3.6e-132 475.3 315 74.6
EL10Ac9g21169 Beta vulgaris HOM05D003958 ORTHO05D004864 6.1e-132 474.6 310 75.8
Sabra18G0099100 Salix brachista HOM05D003958 ORTHO05D004864 1.4e-131 473.4 310 75.8
Gohir.A09G027800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.8e-131 473.0 305 77.4
Cpa.g.sc108.31 Carica papaya HOM05D003958 ORTHO05D004864 5.2e-131 471.5 309 76.1
Sabra18G0100500 Salix brachista HOM05D003958 ORTHO05D004864 6.8e-131 471.1 310 75.2
Potri.018G120500 Populus trichocarpa HOM05D003958 ORTHO05D004864 1.5e-130 469.9 310 75.5
Migut.H00096 Erythranthe guttata HOM05D003958 ORTHO05D004864 2.0e-130 469.5 307 76.2
TWI12G0059 Tripterygium wilfordii HOM05D003958 ORTHO05D004864 4.4e-130 468.4 312 76.0
Lsat_1_v5_gn_4_183181 Lactuca sativa HOM05D003958 ORTHO05D004864 5.7e-130 468.0 315 75.2
Aa31LG11G15350 Aethionema arabicum HOM05D003958 ORTHO05D004864 9.8e-130 467.2 320 73.1
AT5G14600 Arabidopsis thaliana HOM05D003958 ORTHO05D004864 2.2e-129 466.1 317 72.6
ECA232G3491 Erigeron canadensis HOM05D003958 ORTHO05D004864 1.4e-128 463.4 313 74.8
AL6G25360 Arabidopsis lyrata HOM05D003958 ORTHO05D004864 4.1e-128 461.8 317 72.2
Thhalv10014133m.g Eutrema salsugineum HOM05D003958 ORTHO05D004864 4.1e-128 461.8 317 71.9
HanXRQChr09g0255001 Helianthus annuus HOM05D003958 ORTHO05D004864 4.1e-128 461.8 311 74.9
arahy.Tifrunner.gnm1.ann1.8Z0BSJ Arachis hypogaea HOM05D003958 ORTHO05D004864 7.0e-128 461.1 311 75.6
THA.LOC104802398 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 1.2e-127 460.3 317 73.2
CDE06G0036 Ceratophyllum demersum HOM05D003958 ORTHO05D004864 2.0e-127 459.5 308 74.7
AUR62002487 Chenopodium quinoa HOM05D003958 ORTHO05D004864 1.3e-126 456.8 330 70.6
Carub.0006s1277 Capsella rubella HOM05D003958 ORTHO05D004864 1.7e-126 456.4 319 71.8
THA.LOC104821089 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 1.1e-125 453.8 310 73.5
CARHR198720 Cardamine hirsuta HOM05D003958 ORTHO05D004864 1.9e-125 453.0 317 71.3
Sc03g0007660 Simmondsia chinensis HOM05D003958 ORTHO05D004864 1.9e-125 453.0 310 73.2
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 2.5e-125 452.6 315 71.4
ATR0057G029 Amborella trichopoda HOM05D003958 ORTHO05D004864 3.3e-125 452.2 312 74.4
C09p62510 Brassica napus HOM05D003958 ORTHO05D004864 7.3e-125 451.1 319 70.5
AUR62023705 Chenopodium quinoa HOM05D003958 ORTHO05D004864 1.6e-124 449.9 299 75.6
A10p24040 Brassica napus HOM05D003958 ORTHO05D004864 1.0e-123 447.2 319 70.2
BraA10t44467Z Brassica rapa HOM05D003958 ORTHO05D004864 2.3e-123 446.0 319 70.2
BolC9t59091H Brassica oleracea HOM05D003958 ORTHO05D004864 8.9e-123 444.1 326 68.1
MD09G1029500 Malus domestica HOM05D003958 ORTHO05D004864 1.2e-122 443.7 280 78.6
Hma1.2p1_0858F.1_g229230 Hydrangea macrophylla HOM05D003958 ORTHO05D004864 1.5e-122 443.4 335 70.1
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 2.6e-122 442.6 248 85.1
Sabra18G0101000 Salix brachista HOM05D003958 ORTHO05D004864 1.7e-121 439.9 280 77.5
BcaNung03113 Brassica carinata HOM05D003958 ORTHO05D004864 2.9e-121 439.1 317 69.4
SGA_v2.0_scaffold196G40937 Striga asiatica HOM05D003958 ORTHO05D004864 2.9e-121 439.1 310 72.6
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 6.4e-121 438.0 290 75.5
SEGI_01237 Sequoiadendron giganteum HOM05D003958 ORTHO05D004864 2.1e-116 422.9 323 66.3
FAN09G1134 Fragaria x ananassa HOM05D003958 ORTHO05D004864 2.8e-116 422.5 268 77.6
Os04g0319600 Oryza sativa ssp. japonica HOM05D003958 ORTHO05D004864 3.6e-116 422.2 322 66.1
Zm00001eb071120 Zea mays HOM05D003958 ORTHO05D004864 3.6e-116 422.2 320 66.9
Sabra18G0098900 Salix brachista HOM05D003958 ORTHO05D004864 1.6e-111 406.8 261 75.9
BcaC03g13470 Brassica carinata HOM05D003958 ORTHO05D004864 3.9e-110 402.1 308 65.6
Gorai.013G008200 Gossypium raimondii HOM05D003958 ORTHO05D004864 9.5e-109 397.5 307 66.4
MD17G1031500 Malus domestica HOM05D003958 ORTHO05D004864 2.0e-106 389.8 221 86.0
CSS0027303 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 5.8e-106 388.3 308 66.9
Medtr2g014590 Medicago truncatula HOM05D003958 ORTHO05D004864 5.8e-106 388.3 231 80.5
HPP92_013732 Vanilla planifolia HOM05D003958 ORTHO05D004864 7.8e-103 377.9 227 77.1
SMO361G0823 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 1.1e-101 374.0 302 63.6
SMO361G0280 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 1.5e-101 373.6 302 63.9
Pp3c18_5220 Physcomitrium patens HOM05D003958 ORTHO05D004864 1.9e-101 373.2 333 60.4
AagrBONN_evm.TU.Sc2ySwM_344.690 Anthoceros agrestis HOM05D003958 ORTHO05D004864 2.8e-100 369.4 322 59.6
Dinv35088 Davidia involucrata HOM05D003958 ORTHO05D004864 8.1e-100 367.9 311 64.6
Mapoly0053s0094 Marchantia polymorpha HOM05D003958 ORTHO05D004864 1.2e-98 364.0 351 55.0
arahy.Tifrunner.gnm1.ann1.Z5MU8N Arachis hypogaea HOM05D003958 ORTHO05D004864 4.6e-95 352.1 204 85.8
arahy.Tifrunner.gnm1.ann1.M5ZQAR Arachis hypogaea HOM05D003958 ORTHO05D004864 6.0e-95 351.7 222 80.2
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 4.8e-84 315.5 259 61.4
SGA_v2.0_scaffold34G13865 Striga asiatica HOM05D003958 ORTHO05D004864 4.5e-82 308.9 319 55.8
unitig_62.g23558 Utricularia gibba HOM05D003958 ORTHO05D004864 2.7e-79 299.7 207 74.4
Cre05.g244236 Chlamydomonas reinhardtii HOM05D003958 ORTHO05D004864 2.5e-77 293.1 263 58.6
Atru.chr6.2249 Acer truncatum HOM05D003958 ORTHO05D004864 6.2e-76 288.5 165 84.8
MCO10G191 Micromonas commoda HOM05D003958 ORTHO05D004864 1.1e-75 287.7 319 51.1
arahy.Tifrunner.gnm1.ann1.FV4QAS Arachis hypogaea HOM05D003958 ORTHO05D004864 7.9e-71 271.6 171 81.9
GSVIVG01032441001 Vitis vinifera HOM05D000462 ORTHO05D002607 1.1e-69 267.7 155 84.5
Ah.07g203270 Amaranthus hybridus HOM05D003958 ORTHO05D004864 1.3e-65 254.2 150 80.7
PRCOL_00006622 Prasinoderma coloniale HOM05D003958 ORTHO05D004864 1.7e-65 253.8 366 42.9
Eucgr.L02705 Eucalyptus grandis HOM05D003958 ORTHO05D004864 1.9e-64 250.4 169 72.2
Gohir.A10G243400 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.4e-58 229.6 134 82.8
Ah.07g203280 Amaranthus hybridus HOM05D003958 ORTHO05D004864 1.3e-57 227.6 161 70.8
Haze_26162 Corylus avellana HOM05D003958 ORTHO05D004864 1.8e-51 207.2 293 42.0
Gohir.A03G000004 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.6e-50 203.4 112 87.5
Sopen06g018800 Solanum pennellii HOM05D003958 ORTHO05D004864 6.5e-49 198.7 131 77.1
Gohir.A01G232100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.5e-48 196.8 120 79.2
Gohir.D11G349300 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.1e-47 193.7 122 76.2
Gorai.004G293900 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.7e-47 193.4 122 76.2
Gorai.006G274500 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.7e-47 193.4 127 73.2
Gorai.007G380200 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.7e-47 192.6 116 80.2
Gohir.D08G275428 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.0e-46 191.4 122 75.4
Gohir.D09G250100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.3e-46 190.3 117 78.6
Gohir.D01G222101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.0e-46 189.9 117 78.6
Gohir.D03G178200 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.1e-45 188.0 117 77.8
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.1e-45 188.0 119 75.6
BcaC01g04875 Brassica carinata HOM05D003958 ORTHO05D004864 3.3e-45 186.4 241 47.3
Gohir.A06G000101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.8e-41 172.9 93 89.2
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.0e-38 162.9 295 40.0
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.8e-38 161.8 157 57.3
Gohir.1Z049515 Gossypium hirsutum HOM05D003958 ORTHO05D015143 1.2e-37 161.4 101 76.2
Gorai.006G275300 Gossypium raimondii HOM05D003958 ORTHO05D015143 1.2e-37 161.4 101 76.2
Gorai.001G000100 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.4e-30 137.9 84 78.6
Atru.chr6.2248 Acer truncatum HOM05D003958 ORTHO05D004864 1.3e-28 131.3 94 69.1
FAN05G2568 Fragaria x ananassa HOM05D003958 ORTHO05D004864 2.4e-27 127.1 135 53.3
C03p32750 Brassica napus HOM05D003958 ORTHO05D004864 6.5e-25 119.0 95 61.1
BolC3t15610H Brassica oleracea HOM05D003958 ORTHO05D004864 6.5e-25 119.0 95 61.1
Gohir.A09G249500 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.0e-22 110.2 64 84.4
Gohir.1Z049410 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.8e-22 109.0 64 84.4
CSS0019434 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 4.9e-20 102.8 74 73.0
Gohir.D11G176600 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.7e-17 94.4 92 57.6
Gohir.D08G275100 Gossypium hirsutum HOM05D003958 ORTHO05D005872 6.6e-17 92.4 50 84.0
Gorai.N025700 Gossypium raimondii HOM05D003958 ORTHO05D005872 6.6e-17 92.4 50 84.0
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 1.1e-16 91.7 71 66.2
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 1.5e-16 91.3 47 85.1
Gohir.1Z049564 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.9e-16 90.9 50 82.0
Gohir.1Z049570 Gossypium hirsutum HOM05D003958 ORTHO05D005872 1.9e-16 90.9 50 82.0
Gorai.013G272500 Gossypium raimondii HOM05D003958 ORTHO05D004864 3.3e-16 90.1 92 57.6
Gohir.D07G000766 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.3e-16 89.7 92 56.5
Nitab4.5_0001556g0020 Nicotiana tabacum HOM05D003958 ORTHO05D004864 2.8e-15 87.0 78 62.8
Medtr2g014570 Medicago truncatula HOM05D003958 ORTHO05D004864 4.7e-15 86.3 62 71.0
Solyc06g053690.3 Solanum lycopersicum HOM05D003958 ORTHO05D004864 4.7e-15 86.3 62 66.1
Oeu056467.1 Olea europaea HOM05D003958 ORTHO05D004864 6.1e-15 85.9 230 28.3
FAN05G2311 Fragaria x ananassa HOM05D003958 ORTHO05D004864 1.2e-13 81.6 107 47.7
AL4G39060 Arabidopsis lyrata HOM05D000001 ORTHO05D009069 1.5e-08 64.7 107 41.1
BcaC03g13467 Brassica carinata HOM05D002486 ORTHO05D002606 2.3e-06 57.4 155 32.9


User provided reference genes

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