Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 0.0e+00 1307.0 658 100.0
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 8.5e-277 956.8 660 74.1
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 1.2e-262 909.8 658 73.7
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 6.8e-210 734.6 665 60.3
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 5.4e-207 724.9 658 61.9
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 4.6e-206 721.8 661 59.8
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 1.2e-198 697.2 659 59.5
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 1.0e-189 667.5 679 56.7
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 3.9e-189 665.6 707 53.3
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 6.6e-189 664.8 707 53.2
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 2.1e-166 590.1 660 53.2
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 1.1e-159 567.8 679 49.0
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 2.8e-155 553.1 672 49.0
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 6.3e-155 552.0 663 48.7
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 3.5e-145 519.6 661 46.6
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 1.1e-140 504.6 666 45.8
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 2.7e-137 493.4 657 46.7
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 3.5e-137 493.0 668 45.1
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 6.1e-134 482.3 671 43.7
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 1.0e-133 481.5 661 43.6
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 1.2e-132 478.0 673 44.1
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 1.7e-131 474.2 662 44.9
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 4.8e-131 472.6 664 44.0
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 6.3e-131 472.2 664 44.4
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 4.1e-130 469.5 668 44.6
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 7.7e-129 465.3 663 43.6
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.3e-128 464.5 670 44.2
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.3e-128 464.5 664 43.7
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 1.7e-128 464.2 664 43.4
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.5e-127 459.1 674 43.8
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 1.2e-126 458.0 661 42.5
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 4.7e-126 456.1 723 41.1
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 2.3e-125 453.8 671 43.5
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 7.5e-124 448.7 678 43.1
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.3e-123 448.0 675 43.0
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.8e-123 446.8 675 43.1
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 3.1e-122 443.4 676 43.2
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 2.5e-119 433.7 664 42.5
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 9.5e-119 431.8 672 42.7
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 1.0e-117 428.3 534 48.9
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 1.3e-115 421.4 660 41.1
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 9.8e-108 395.2 670 39.0
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 9.8e-108 395.2 688 39.2
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 1.1e-106 391.7 661 41.5
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 1.6e-105 387.9 668 40.3
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 6.6e-104 382.5 667 39.4
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.1e-103 381.7 657 40.3
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 3.3e-103 380.2 664 39.9
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 7.3e-103 379.0 677 39.0
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 1.8e-101 374.4 662 38.2
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 6.8e-101 372.5 624 39.6
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 6.8e-101 372.5 677 38.8
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 1.5e-100 371.3 661 39.0
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 3.4e-100 370.2 673 37.1
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 3.7e-99 366.7 667 37.8
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 3.7e-99 366.7 661 38.7
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 5.4e-98 362.8 655 39.4
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 4.6e-97 359.8 660 36.8
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 1.3e-96 358.2 656 38.4
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.5e-95 354.0 477 43.6
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 2.8e-94 350.5 667 37.3
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 1.2e-92 345.1 668 37.7
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 4.4e-92 343.2 663 38.0
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 6.4e-91 339.3 665 37.7
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 1.4e-90 338.2 626 38.3
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 5.4e-90 336.3 678 35.8
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 5.4e-90 336.3 678 35.8
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 9.2e-90 335.5 665 37.1
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 2.1e-89 334.3 657 37.6
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 3.5e-89 333.6 663 37.0
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 1.3e-88 331.6 665 36.1
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 5.1e-88 329.7 674 35.3
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 3.3e-87 327.0 662 37.3
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 9.6e-87 325.5 660 37.6
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 1.2e-86 325.1 661 38.7
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 1.6e-86 324.7 658 35.1
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 2.8e-86 323.9 667 36.3
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 6.2e-86 322.8 660 38.2
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 8.1e-86 322.4 691 36.6
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 1.4e-85 321.6 671 34.9
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 1.4e-85 321.6 661 38.1
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 2.0e-84 317.8 663 37.7
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 3.4e-84 317.0 674 35.2
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 4.4e-84 316.6 540 38.5
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 1.7e-83 314.7 674 35.2
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 4.9e-83 313.2 658 37.4
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.9e-82 311.2 508 43.3
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 1.2e-81 308.5 659 37.3
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 1.0e-80 305.4 660 34.2
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 7.3e-79 299.3 614 37.5
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 1.6e-78 298.1 659 36.1
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 3.1e-77 293.9 674 35.6
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 6.9e-77 292.7 604 36.6
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 9.9e-76 288.9 661 34.0
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 8.4e-75 285.8 510 41.2
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 1.4e-74 285.0 666 33.5
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.9e-74 284.6 433 40.9
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 5.1e-72 276.6 411 42.3
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 8.7e-72 275.8 592 34.5
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 2.4e-66 257.7 702 32.5
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 2.1e-65 254.6 432 41.4
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 1.9e-63 248.1 607 33.8
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 4.9e-59 233.4 626 32.3
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 2.3e-56 224.6 537 32.2
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 4.5e-52 210.3 647 30.9
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 2.2e-51 208.0 701 29.1
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 3.0e-48 197.6 360 39.2
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 3.3e-47 194.1 638 30.9
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 9.1e-45 186.0 255 48.6
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 7.9e-41 172.9 379 32.5
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 7.9e-41 172.9 593 28.8
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 2.2e-38 164.9 739 26.8
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.9e-34 151.8 244 42.6
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 1.2e-33 149.1 370 34.9
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 1.6e-33 148.7 251 43.8
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.8e-32 145.2 271 34.7
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 4.8e-14 84.0 118 41.5
MBI16_g03132_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.4e-13 82.4 192 33.9
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 1.6e-12 79.0 470 24.7
Mapoly0039s0001 Marchantia polymorpha HOM05D005720 ORTHO05D006984 1.0e-11 76.3 264 26.1
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.9e-10 72.0 140 35.0
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 1.6e-09 68.9 229 30.1
Actinidia30732 Actinidia chinensis HOM05D005720 ORTHO05D006984 1.2e-07 62.8 173 30.1
Pp3c15_13500 Physcomitrium patens HOM05D005720 ORTHO05D006984 9.8e-07 59.7 286 25.9
BcaB08g35657 Brassica carinata HOM05D005720 ORTHO05D006984 6.3e-06 57.0 183 35.0


User provided reference genes

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