Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 6.6e-78 293.9 140 100.0
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.1e-48 196.8 262 46.6
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 9.2e-48 193.7 262 45.8
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 5.8e-42 174.5 271 42.8
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.5e-37 159.8 271 41.0
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.7e-33 146.4 257 38.9
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 9.3e-32 140.6 133 57.1
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 2.3e-30 136.0 111 64.0
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 3.0e-30 135.6 273 34.8
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 1.5e-29 133.3 111 63.1
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 4.3e-29 131.7 268 35.8
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 5.6e-29 131.3 268 35.4
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 9.9e-26 120.6 136 48.5
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 1.7e-25 119.8 137 49.6
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 2.1e-23 112.8 116 50.0
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 2.1e-23 112.8 268 31.3
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 4.6e-23 111.7 268 30.2
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.3e-22 110.2 268 29.9
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.3e-22 110.2 147 44.2
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.1e-21 107.1 269 30.1
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.1e-21 107.1 269 30.1
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.9e-21 106.3 123 48.0
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 3.3e-21 105.5 145 44.1
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 7.4e-21 104.4 274 30.3
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 7.4e-21 104.4 117 50.4
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 7.4e-21 104.4 117 49.6
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 1.3e-20 103.6 136 41.9
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 1.3e-20 103.6 124 48.4
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.1e-20 102.8 136 41.9
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.8e-20 102.4 116 50.0
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 3.7e-20 102.1 123 48.0
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.7e-20 102.1 116 50.0
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.7e-20 102.1 116 49.1
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 4.8e-20 101.7 124 47.6
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 8.1e-20 100.9 115 46.1
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 8.1e-20 100.9 111 47.7
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 8.1e-20 100.9 266 30.1
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 1.1e-19 100.5 118 45.8
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.4e-19 100.1 123 46.3
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 3.1e-19 99.0 158 36.7
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.1e-19 99.0 123 45.5
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 3.1e-19 99.0 117 47.9
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 6.9e-19 97.8 121 48.8
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 9.0e-19 97.4 111 46.8
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 9.0e-19 97.4 272 28.3
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.5e-18 96.7 119 46.2
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.5e-18 96.7 122 44.3
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 2.6e-18 95.9 271 29.2
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 2.6e-18 95.9 109 47.7
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.6e-18 95.9 117 47.9
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.6e-18 95.9 122 43.4
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 2.6e-18 95.9 122 44.3
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 5.8e-18 94.7 149 41.6
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 5.8e-18 94.7 122 43.4
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 7.6e-18 94.4 106 49.1
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 1.0e-17 94.0 123 44.7
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.3e-17 93.6 122 43.4
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.7e-17 93.2 267 27.7
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 2.2e-17 92.8 273 27.5
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 2.9e-17 92.4 120 45.8
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 3.8e-17 92.0 123 41.5
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 8.4e-17 90.9 109 43.1
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 2.5e-16 89.4 123 43.1
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 4.2e-16 88.6 119 44.5
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 5.5e-16 88.2 114 43.0
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.2e-15 87.0 272 27.2
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.7e-15 85.9 116 39.7
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 2.7e-15 85.9 267 26.6
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.7e-15 85.9 106 42.5
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 4.6e-15 85.1 113 41.6
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 4.6e-15 85.1 116 39.7
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 7.9e-15 84.3 111 39.6
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 1.0e-14 84.0 113 43.4
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 1.0e-14 84.0 115 44.3
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 3.0e-14 82.4 148 34.5
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 3.0e-14 82.4 271 26.6
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 6.7e-14 81.3 124 39.5
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 8.7e-14 80.9 112 40.2
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 1.1e-13 80.5 126 38.1
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.9e-13 79.7 115 40.0
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 2.5e-13 79.3 270 25.9
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 4.3e-13 78.6 144 36.8
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 5.7e-13 78.2 105 40.0
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 5.7e-13 78.2 252 27.4
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 9.6e-13 77.4 116 36.2
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.3e-12 77.0 123 38.2
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 3.7e-12 75.5 115 40.9
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 6.3e-12 74.7 84 48.8
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 8.2e-12 74.3 125 32.8
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 8.2e-12 74.3 114 38.6
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.1e-11 73.9 107 40.2
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.4e-11 73.6 136 36.8
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.4e-11 73.6 136 36.8
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 1.4e-11 73.6 118 37.3
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 1.2e-10 70.5 128 35.9
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 1.5e-10 70.1 95 44.2
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 2.0e-10 69.7 121 38.8
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 4.5e-10 68.6 118 38.1
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 1.0e-09 67.4 64 54.7
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 1.4e-08 63.5 35 82.9
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 5.5e-08 61.6 35 80.0
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 9.3e-08 60.8 136 33.1
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 9.3e-08 60.8 125 34.4
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 4.6e-07 58.5 112 33.0
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 2.3e-06 56.2 107 34.6
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 5.1e-06 55.1 113 31.0


User provided reference genes

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