Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 2.3e-98 362.5 213 100.0
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 1.1e-81 307.0 219 85.8
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 1.6e-59 233.4 215 76.7
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 1.5e-57 226.9 210 77.1
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 3.6e-43 179.1 232 57.8
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 6.8e-34 148.3 217 47.9
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 6.3e-32 141.7 209 57.4
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 8.3e-32 141.4 227 52.0
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 2.0e-30 136.7 242 47.9
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 2.9e-29 132.9 220 49.5
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 2.5e-28 129.8 216 49.5
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 2.8e-27 126.3 235 46.8
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 4.0e-26 122.5 222 49.1
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 1.2e-25 120.9 222 48.2
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 2.0e-25 120.2 225 48.4
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 2.0e-25 120.2 214 48.6
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 2.0e-25 120.2 214 48.6
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 4.4e-25 119.0 154 56.5
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 5.7e-25 118.6 217 47.9
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 9.8e-25 117.9 214 49.5
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 2.2e-24 116.7 219 48.4
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 2.4e-23 113.2 156 59.0
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 2.4e-23 113.2 231 45.9
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 3.2e-23 112.8 215 47.4
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 4.1e-23 112.5 242 41.3
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.6e-22 110.5 221 45.7
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 2.7e-22 109.8 226 44.2
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 4.6e-22 109.0 238 42.0
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 1.3e-21 107.5 239 42.3
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 1.3e-21 107.5 243 43.6
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 3.9e-21 105.9 232 42.2
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 3.9e-21 105.9 231 44.2
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 8.6e-21 104.8 249 43.0
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 8.6e-21 104.8 260 41.2
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 1.5e-20 104.0 223 41.7
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 3.3e-20 102.8 245 42.4
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 4.3e-20 102.4 218 41.7
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 7.3e-20 101.7 231 42.9
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 9.5e-20 101.3 240 42.5
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 9.5e-20 101.3 240 42.5
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 6.2e-19 98.6 240 41.7
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 3.1e-18 96.3 232 45.7
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 6.8e-18 95.1 240 42.5
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 1.5e-17 94.0 235 40.4
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 2.0e-17 93.6 211 41.7
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.6e-17 93.2 237 43.0
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 2.6e-17 93.2 223 36.8
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 4.4e-17 92.4 212 44.8
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 1.3e-16 90.9 244 38.5
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 3.7e-16 89.4 241 37.3
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 4.9e-16 89.0 229 44.5
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 4.9e-16 89.0 198 42.9
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 1.4e-15 87.4 232 44.8
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 1.6e-14 84.0 74 62.2
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 1.6e-14 84.0 183 46.4
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 2.7e-14 83.2 249 37.8
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 2.7e-14 83.2 235 41.7
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 3.5e-14 82.8 201 38.3
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 4.6e-14 82.4 201 38.3
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 8.6e-13 78.2 206 41.7
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 2.5e-12 76.6 225 40.9
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 7.3e-12 75.1 214 36.9
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 7.3e-12 75.1 204 46.1
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 7.3e-12 75.1 204 44.1
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 7.3e-12 75.1 204 46.1
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 9.5e-12 74.7 281 32.4
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 9.5e-12 74.7 208 40.4
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 2.1e-11 73.6 266 31.2
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 2.1e-11 73.6 266 31.2
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 2.1e-11 73.6 266 31.2
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.1e-11 73.6 223 34.1
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 2.1e-11 73.6 207 40.1
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 2.8e-11 73.2 224 33.9
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 6.2e-11 72.0 204 43.1
AUR62036175 Chenopodium quinoa HOM05D007784 ORTHO05D008654 6.2e-11 72.0 233 33.5
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 1.1e-10 71.2 230 39.1
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 1.8e-10 70.5 267 30.7
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 1.8e-10 70.5 216 40.3
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 2.3e-10 70.1 261 33.3
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 2.3e-10 70.1 212 34.9
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 3.1e-10 69.7 230 32.2
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 5.2e-10 68.9 214 34.6
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 6.8e-10 68.6 261 34.9
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 8.9e-10 68.2 284 33.1
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 1.2e-09 67.8 208 30.3
BcaB07g33353 Brassica carinata HOM05D009851 ORTHO05D008654 1.5e-09 67.4 263 34.2
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 1.5e-09 67.4 202 35.6
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 1.5e-09 67.4 207 43.5
CARHR043380 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.0e-09 67.0 282 31.9
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 2.6e-09 66.6 67 56.7
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 3.4e-09 66.2 242 32.6
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 5.8e-09 65.5 225 30.7
AUR62019455 Chenopodium quinoa HOM05D007784 ORTHO05D008654 9.8e-09 64.7 266 28.9
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 9.8e-09 64.7 239 36.0
Sp1g39710 Schrenkiella parvula HOM05D009851 ORTHO05D008654 2.2e-08 63.5 277 31.4
Sed0023140 Sechium edule HOM05D007784 ORTHO05D008654 2.9e-08 63.2 50 70.0
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 4.9e-08 62.4 225 36.0
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 1.4e-07 60.8 175 34.9
Eucgr.F03301 Eucalyptus grandis HOM05D007784 ORTHO05D008654 1.9e-07 60.5 84 39.3
Thhalv10012165m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 2.4e-07 60.1 282 32.3
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 3.2e-07 59.7 229 28.4
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 5.4e-07 58.9 43 65.1
SGA_v2.0_scaffold73G24239 Striga asiatica HOM05D007784 ORTHO05D008654 2.1e-06 57.0 213 37.1
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 7.8e-06 55.1 244 33.6


User provided reference genes

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