Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G161300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.3e-107 391.3 245 100.0
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.1e-85 320.5 276 72.5
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.6e-63 245.7 299 49.8
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.8e-62 243.4 158 76.6
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 6.1e-47 191.8 146 63.0
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 8.0e-47 191.4 256 63.7
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 9.2e-35 151.4 122 64.8
Phvul.010G077600 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.9e-28 129.8 227 55.9
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 1.6e-23 114.0 146 40.4
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 1.4e-19 100.9 152 36.2
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 1.7e-17 94.0 146 33.6
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 2.3e-17 93.6 136 35.3
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 8.7e-17 91.7 152 32.2
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 1.5e-16 90.9 153 30.7
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 4.7e-15 85.9 144 31.9
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 1.4e-14 84.3 150 32.0
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 1.2e-13 81.3 152 30.3
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 1.5e-13 80.9 136 30.9
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 2.6e-13 80.1 150 30.7
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 3.8e-12 76.3 150 30.7
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.4e-12 75.1 166 27.1
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-11 74.3 149 30.2
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 2.4e-11 73.6 150 34.0
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 3.2e-11 73.2 147 28.6
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 4.2e-11 72.8 139 31.7
Peaxi162Scf00005g00443 Petunia axillaris HOM05D002954 ORTHO05D003353 9.3e-11 71.6 102 37.3
arahy.Tifrunner.gnm1.ann1.E8HHXW Arachis hypogaea HOM05D002954 ORTHO05D010308 1.2e-10 71.2 138 32.6
arahy.Tifrunner.gnm1.ann1.Y6RTQD Arachis hypogaea HOM05D002954 ORTHO05D010308 1.2e-10 71.2 138 32.6
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.2e-10 71.2 108 34.3
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 1.2e-10 71.2 112 33.0
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 2.1e-10 70.5 256 25.8
Lj2g0015436 Lotus japonicus HOM05D002954 ORTHO05D010308 3.5e-10 69.7 145 29.0
Psat5g088160 Pisum sativum HOM05D002954 ORTHO05D003353 7.8e-10 68.6 63 49.2
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-09 67.8 119 30.3
Peaxi162Scf00914g00054 Petunia axillaris HOM05D002954 ORTHO05D003353 1.3e-09 67.8 94 34.0
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 3.0e-09 66.6 147 25.9
Nitab4.5_0000712g0160 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.9e-09 66.2 123 35.8
Peaxi162Scf02065g00005 Petunia axillaris HOM05D002954 ORTHO05D010308 3.9e-09 66.2 85 41.2
arahy.Tifrunner.gnm1.ann1.2XU2QD Arachis hypogaea HOM05D002954 ORTHO05D003353 8.7e-09 65.1 71 43.7
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-08 64.3 124 27.4
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 2.5e-08 63.5 133 27.8
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 5.6e-08 62.4 124 31.5
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 5.6e-08 62.4 101 31.7
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 5.6e-08 62.4 57 49.1
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 7.3e-08 62.0 154 27.9
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.3e-08 62.0 259 26.6
Nitab4.5_0007527g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-07 60.8 123 34.1
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 2.8e-07 60.1 102 29.4
Psat0s2247g0040 Pisum sativum HOM05D002954 ORTHO05D017747 2.8e-07 60.1 67 43.3
Psat4g174600 Pisum sativum HOM05D002954 ORTHO05D003353 2.8e-07 60.1 67 43.3
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 3.6e-07 59.7 147 26.5
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 4.8e-07 59.3 101 28.7
arahy.Tifrunner.gnm1.ann1.I134XL Arachis hypogaea HOM05D011000 ORTHO05D003353 6.2e-07 58.9 143 26.6
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 6.2e-07 58.9 135 25.9
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 8.1e-07 58.5 148 25.0
Peaxi162Scf01071g00046 Petunia axillaris HOM05D040622 ORTHO05D010308 1.1e-06 58.2 100 34.0
arahy.Tifrunner.gnm1.ann1.LZRM5J Arachis hypogaea HOM05D011000 ORTHO05D000385 3.1e-06 56.6 142 26.8
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.0e-06 56.2 123 30.9
VMungo0720G1591 Vigna mungo HOM05D002954 ORTHO05D000385 6.9e-06 55.5 141 24.1
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 9.0e-06 55.1 118 26.3


User provided reference genes

Program Settings