Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 2.2e-244 848.6 448 100.0
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 2.2e-223 778.9 448 91.5
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 4.8e-199 698.0 451 81.8
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 2.0e-192 676.0 451 79.6
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 7.7e-181 637.5 452 75.7
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 2.2e-175 619.4 451 74.1
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.1e-171 607.1 450 72.7
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 1.9e-171 606.3 451 72.3
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 3.3e-171 605.5 452 72.3
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 6.1e-170 601.3 452 72.1
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 6.1e-170 601.3 452 72.1
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 1.6e-146 523.5 451 63.6
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 4.7e-146 521.9 450 62.2
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 4.0e-145 518.8 451 63.4
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 1.2e-144 517.3 450 62.4
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.2e-143 513.1 451 61.0
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 2.9e-143 512.7 450 61.8
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.4e-142 510.4 451 62.1
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.4e-142 510.4 451 60.5
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.9e-142 510.0 450 62.7
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 1.2e-141 507.3 451 61.6
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 1.2e-141 507.3 454 62.8
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 6.0e-141 505.0 450 60.4
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.3e-140 503.8 450 61.8
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 1.7e-140 503.4 450 62.2
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 3.0e-140 502.7 451 60.1
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 3.9e-140 502.3 454 61.5
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 1.5e-139 500.4 451 61.4
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 1.9e-139 500.0 451 60.3
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 3.3e-139 499.2 451 60.3
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 4.3e-139 498.8 451 61.0
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 5.6e-139 498.4 451 61.4
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 2.8e-138 496.1 451 60.1
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 4.0e-137 492.3 451 60.3
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 1.5e-136 490.3 351 75.8
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 4.4e-136 488.8 411 64.7
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 7.6e-136 488.0 451 59.2
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 7.6e-136 488.0 451 59.4
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 9.9e-136 487.6 451 60.1
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 8.4e-135 484.6 466 56.9
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.6e-133 480.3 465 57.8
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 7.8e-133 478.0 451 58.8
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.0e-132 477.6 465 57.2
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 9.6e-131 471.1 448 58.7
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.3e-130 470.7 475 55.4
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.6e-130 470.3 475 55.4
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 1.4e-129 467.2 451 57.0
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.4e-129 466.5 461 56.4
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 2.4e-129 466.5 449 56.6
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 2.4e-129 466.5 452 56.9
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 4.0e-129 465.7 451 57.4
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 6.9e-129 464.9 451 56.5
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 9.0e-129 464.5 451 56.5
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 2.0e-128 463.4 450 57.8
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 2.6e-128 463.0 451 55.7
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 5.8e-128 461.8 451 55.7
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 7.6e-128 461.5 452 56.4
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 9.9e-128 461.1 450 57.6
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 1.3e-127 460.7 451 56.3
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.3e-127 460.7 390 65.1
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 6.4e-127 458.4 453 56.7
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 1.9e-126 456.8 451 56.5
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 4.2e-126 455.7 452 57.1
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 2.7e-125 453.0 487 53.0
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 5.6e-123 445.3 569 48.5
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 5.3e-121 438.7 450 52.2
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 6.9e-121 438.3 448 55.8
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.2e-119 433.3 448 55.4
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 6.4e-119 431.8 450 54.4
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 8.4e-119 431.4 496 51.0
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 1.4e-118 430.6 450 53.8
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 5.5e-118 428.7 450 53.8
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 2.7e-117 426.4 450 53.1
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 3.5e-117 426.0 450 53.6
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 2.5e-115 419.9 450 53.1
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 4.3e-115 419.1 392 58.9
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 5.3e-113 412.1 404 57.4
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 2.0e-112 410.2 450 51.8
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 2.6e-112 409.8 450 51.8
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 5.8e-112 408.7 443 52.6
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 7.6e-112 408.3 395 59.0
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 7.6e-112 408.3 450 51.8
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 1.7e-111 407.1 462 52.2
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 8.4e-111 404.8 451 51.2
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 7.1e-110 401.7 496 49.2
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 6.0e-109 398.7 464 50.0
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 1.8e-108 397.1 366 60.7
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 6.3e-106 388.7 452 48.7
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 3.1e-105 386.3 450 50.4
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.1e-102 377.9 408 53.7
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 7.2e-102 375.2 449 45.2
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.2e-101 374.4 424 51.4
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 2.0e-99 367.1 398 53.0
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 6.7e-84 315.5 415 47.5
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.9e-78 297.4 293 54.3
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.9e-78 297.4 293 54.3
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 3.6e-77 293.1 377 48.5
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 8.3e-66 255.4 456 35.1
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 1.4e-65 254.6 251 56.6
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 7.0e-65 252.3 268 53.7
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 2.9e-63 246.9 238 57.1
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.6e-59 233.8 456 35.5
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 2.8e-58 230.3 164 72.0
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 1.4e-57 228.0 207 59.4
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 1.6e-56 224.6 461 34.3
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 4.5e-56 223.0 265 53.2
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 2.4e-49 200.7 231 48.5
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 4.0e-44 183.3 163 56.4
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 5.4e-41 172.9 166 58.4
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 4.0e-36 156.8 372 33.9
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 2.9e-34 150.6 293 36.9
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.3e-26 125.2 125 53.6
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.8e-20 104.8 156 39.7
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 4.4e-19 100.1 136 46.3
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.9e-18 97.4 91 60.4
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 3.0e-15 87.4 101 47.5
Cre05.g246300 Chlamydomonas reinhardtii HOM05D005607 ORTHO05D008142 1.6e-08 65.1 240 25.0
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 9.6e-06 55.8 64 50.0


User provided reference genes

Program Settings