Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 9.1e-186 653.7 389 100.0
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 1.0e-128 464.2 327 74.9
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 1.0e-96 357.8 359 57.9
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 5.1e-72 275.8 470 40.9
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 5.7e-47 192.6 385 38.7
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 8.5e-43 178.7 389 36.5
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 5.5e-42 176.0 390 36.9
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 5.2e-40 169.5 388 37.1
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 2.0e-39 167.5 391 36.3
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 7.7e-36 155.6 403 33.3
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 2.9e-35 153.7 421 38.2
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 1.6e-33 147.9 389 36.0
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 2.8e-33 147.1 381 39.1
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 3.0e-32 143.7 371 33.2
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 6.4e-30 136.0 389 32.4
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.0e-28 131.0 400 33.8
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 5.9e-28 129.4 395 32.7
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 7.8e-28 129.0 400 32.0
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 1.0e-27 128.6 422 32.7
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 1.0e-27 128.6 420 33.1
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 6.6e-27 125.9 414 31.9
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 3.3e-26 123.6 375 30.9
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 8.0e-25 119.0 432 34.7
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 2.3e-24 117.5 360 33.1
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 1.2e-23 115.2 377 34.2
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 2.6e-23 114.0 430 34.7
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 2.6e-23 114.0 422 33.9
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 9.8e-23 112.1 401 34.4
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.2e-22 110.9 425 34.1
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.2e-22 110.9 421 34.2
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 4.9e-22 109.8 427 32.1
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 4.9e-22 109.8 386 35.5
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 8.3e-22 109.0 413 33.4
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 1.1e-21 108.6 383 31.9
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.4e-21 108.2 397 30.2
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 1.9e-21 107.8 434 36.2
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 2.4e-21 107.5 336 33.0
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.0e-20 104.4 399 29.8
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 6.0e-20 102.8 393 30.0
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 6.0e-20 102.8 399 29.3
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.0e-19 102.1 372 34.4
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 2.3e-19 100.9 420 32.9
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.3e-19 100.9 397 31.0
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 5.0e-19 99.8 385 30.9
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 8.6e-19 99.0 401 30.9
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 1.1e-18 98.6 375 32.0
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 3.3e-18 97.1 279 34.4
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 5.6e-18 96.3 411 31.9
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 6.2e-17 92.8 391 29.7
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 6.2e-17 92.8 411 28.5
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.1e-16 92.0 395 33.2
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 1.8e-16 91.3 346 30.6
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 2.3e-16 90.9 402 29.4
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 5.2e-16 89.7 403 29.8
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 8.9e-16 89.0 406 28.6
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 1.2e-15 88.6 418 27.5
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 1.5e-15 88.2 421 26.8
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 5.8e-15 86.3 330 29.4
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 7.5e-15 85.9 407 26.3
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 9.8e-15 85.5 393 27.5
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 9.8e-15 85.5 430 34.4
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 1.3e-14 85.1 296 32.4
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.7e-14 84.7 400 29.8
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 2.2e-14 84.3 396 30.8
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 4.9e-14 83.2 403 29.0
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 4.9e-14 83.2 399 28.1
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 8.3e-14 82.4 345 29.9
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 8.3e-14 82.4 418 28.9
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 3.2e-13 80.5 328 30.5
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 5.4e-13 79.7 380 29.7
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.6e-12 78.2 407 28.3
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 2.1e-12 77.8 283 30.7
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 4.6e-12 76.6 396 29.0
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 6.0e-12 76.3 419 28.4
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 7.8e-12 75.9 408 26.2
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.0e-11 73.9 321 30.5
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 3.0e-11 73.9 395 27.8
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 3.9e-11 73.6 312 30.1
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 5.1e-11 73.2 363 27.8
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 5.1e-11 73.2 403 26.1
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.5e-10 71.6 394 29.9
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 1.9e-10 71.2 407 27.5
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 2.5e-10 70.9 407 28.7
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 3.3e-10 70.5 301 30.2
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 4.3e-10 70.1 401 27.9
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 5.6e-10 69.7 377 27.6
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 5.6e-10 69.7 381 30.7
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 5.6e-10 69.7 167 34.1
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 7.3e-10 69.3 224 33.9
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 9.5e-10 68.9 302 29.1
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.6e-09 68.2 413 26.2
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 2.3e-08 64.3 327 27.5
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 3.1e-08 63.9 426 25.8
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 3.1e-08 63.9 368 27.4
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 3.1e-08 63.9 286 27.3
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 6.8e-08 62.8 222 31.5
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 6.8e-08 62.8 388 27.1
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.2e-07 62.0 327 28.4
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 1.2e-07 62.0 340 26.8
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.4e-07 60.5 235 32.8
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 5.8e-07 59.7 370 26.2
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 9.9e-07 58.9 370 26.2
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 1.7e-06 58.2 381 27.0
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 3.7e-06 57.0 370 26.5


User provided reference genes

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