Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 1.9e-122 442.6 239 100.0
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 2.0e-95 352.8 240 81.2
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 6.4e-73 278.1 272 61.4
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 6.4e-65 251.5 246 58.1
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 6.6e-62 241.5 245 55.9
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 7.3e-61 238.0 245 55.9
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 1.3e-54 217.2 242 51.7
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 6.6e-54 214.9 267 49.8
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 1.8e-43 180.3 251 46.2
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 9.3e-40 167.9 242 43.4
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 3.5e-39 166.0 242 41.7
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 5.3e-35 152.1 259 39.0
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 1.5e-34 150.6 251 40.2
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 1.5e-34 150.6 249 38.6
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 2.9e-33 146.4 246 39.0
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 6.4e-33 145.2 257 39.7
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 3.5e-31 139.4 247 36.0
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 4.6e-31 139.0 262 37.8
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 4.6e-31 139.0 242 36.8
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 6.0e-31 138.7 251 39.0
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 7.9e-31 138.3 247 36.0
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.8e-30 137.1 247 35.6
Glyma.12G151000 Glycine max HOM05D000120 ORTHO05D009410 2.3e-30 136.7 181 49.2
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 9.6e-29 131.3 239 36.4
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 2.8e-28 129.8 252 36.1
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 3.7e-28 129.4 240 36.7
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 8.1e-28 128.3 253 35.2
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 1.1e-27 127.9 241 35.3
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 2.4e-27 126.7 250 38.8
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 3.1e-27 126.3 252 37.3
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 3.1e-27 126.3 230 37.4
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 5.3e-27 125.6 248 35.1
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 9.0e-27 124.8 240 37.1
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 1.5e-26 124.0 372 28.2
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 2.6e-26 123.2 251 35.9
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 1.3e-25 120.9 226 35.8
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 1.1e-24 117.9 244 36.5
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 3.2e-24 116.3 243 34.2
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 7.1e-24 115.2 225 34.2
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.2e-23 114.4 252 34.1
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 1.6e-23 114.0 237 34.6
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 4.6e-23 112.5 243 33.7
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 1.3e-22 110.9 232 36.6
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.1e-21 107.8 209 33.0
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.9e-21 107.1 231 33.8
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 3.3e-21 106.3 236 34.3
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 3.3e-21 106.3 242 36.4
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 4.3e-21 105.9 329 30.1
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.8e-20 103.2 248 33.1
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 3.7e-20 102.8 226 33.2
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 8.2e-20 101.7 226 35.0
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.8e-19 100.5 243 32.9
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 1.8e-19 100.5 329 28.9
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 1.8e-19 100.5 246 32.1
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 3.1e-19 99.8 231 32.0
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 3.1e-19 99.8 231 34.6
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 6.9e-19 98.6 246 31.7
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 6.9e-19 98.6 255 32.9
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 7.6e-18 95.1 257 33.1
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 2.2e-17 93.6 239 33.9
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 6.5e-17 92.0 227 33.5
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 1.4e-16 90.9 246 30.9
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 1.9e-16 90.5 242 33.5
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 2.5e-16 90.1 236 33.9
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 5.5e-16 89.0 243 30.0
arahy.Tifrunner.gnm1.ann1.T5BQ73 Arachis hypogaea HOM05D000120 ORTHO05D009410 7.1e-16 88.6 73 60.3
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 7.1e-16 88.6 208 32.7
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 3.5e-15 86.3 201 32.3
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 3.5e-15 86.3 283 27.2
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 2.3e-14 83.6 270 27.4
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 3.9e-14 82.8 239 31.4
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 8.7e-14 81.6 248 32.7
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 1.1e-13 81.3 221 30.8
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.1e-13 81.3 230 32.6
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 7.4e-13 78.6 248 29.8
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 4.8e-12 75.9 254 27.6
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 6.3e-12 75.5 249 27.7
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 6.3e-12 75.5 240 28.8
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 8.2e-12 75.1 255 27.5
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.8e-11 73.9 240 29.6
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 9.0e-11 71.6 249 29.7
FAN15G0678 Fragaria x ananassa HOM05D000722 ORTHO05D000590 3.4e-10 69.7 93 36.6
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 7.7e-10 68.6 139 36.7
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 5.0e-09 65.9 258 26.4
BcaC01g00270 Brassica carinata HOM05D011065 ORTHO05D009410 2.5e-08 63.5 256 30.5
C03p77470 Brassica napus HOM05D011065 ORTHO05D009410 2.5e-08 63.5 256 30.5
BolC3t20002H Brassica oleracea HOM05D011065 ORTHO05D009410 2.5e-08 63.5 256 30.5
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 5.5e-08 62.4 256 29.3
BraA08t34348Z Brassica rapa HOM05D011065 ORTHO05D009410 2.1e-07 60.5 257 28.0
BcaB03g12236 Brassica carinata HOM05D011065 ORTHO05D009410 3.6e-07 59.7 256 27.7
Carub.0007s0080 Capsella rubella HOM05D011065 ORTHO05D009410 1.8e-06 57.4 269 28.6
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 1.8e-06 57.4 256 28.1
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 3.9e-06 56.2 231 26.8


User provided reference genes

Program Settings