Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 4.9e-171 604.4 304 100.0
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 5.8e-164 580.9 304 96.1
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.9e-159 565.8 304 93.4
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.3e-152 543.1 304 88.8
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.5e-151 539.7 304 88.5
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 9.7e-151 537.0 304 88.5
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 1.5e-148 529.6 304 87.2
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 5.9e-148 527.7 304 86.5
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 6.5e-147 524.2 304 85.9
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 1.2e-140 503.4 304 83.9
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 1.2e-140 503.4 304 83.9
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 5.9e-140 501.1 304 80.9
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 2.9e-139 498.8 299 81.3
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.9e-138 496.1 303 80.9
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 80.9
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 2.1e-137 492.7 304 80.9
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 4.7e-137 491.5 304 80.3
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 6.1e-137 491.1 304 78.6
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 5.1e-136 488.0 304 79.9
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 8.8e-136 487.3 304 79.6
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 2.6e-135 485.7 304 78.3
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 9.7e-135 483.8 304 78.9
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 3.7e-134 481.9 304 78.3
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 3.7e-134 481.9 304 78.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 3.7e-134 481.9 304 78.0
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 6.3e-134 481.1 304 77.6
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 4.1e-133 478.4 304 78.0
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 4.1e-133 478.4 304 78.3
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 9.1e-133 477.2 299 78.9
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 1.5e-132 476.5 304 77.0
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.0e-132 476.1 304 75.3
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.6e-132 475.7 304 78.0
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 4.5e-132 474.9 304 78.0
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 7.7e-132 474.2 304 77.3
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 78.0
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 2.2e-131 472.6 304 76.0
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.9e-131 472.2 304 77.3
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 2.9e-131 472.2 300 78.3
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.8e-131 471.9 300 77.7
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.1e-130 470.3 304 76.3
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 4.2e-130 468.4 302 75.5
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 4.2e-130 468.4 299 76.3
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 5.5e-130 468.0 304 76.3
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 9.4e-130 467.2 297 76.1
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.6e-129 465.3 304 76.0
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 4.7e-129 464.9 304 74.7
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 4.7e-129 464.9 304 74.7
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.1e-129 464.5 302 76.2
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.0e-128 463.8 304 74.7
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 5.2e-128 461.5 304 73.7
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 2.6e-127 459.1 304 73.0
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 7.4e-127 457.6 304 74.3
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 2.2e-126 456.1 304 73.0
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 2.8e-126 455.7 304 73.7
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 73.0
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.4e-125 453.4 304 73.0
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 7.0e-125 451.1 304 72.4
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 2.6e-124 449.1 284 79.2
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.7e-123 446.4 306 72.9
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 2.2e-123 446.0 306 72.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 2.2e-123 446.0 306 72.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 2.9e-123 445.7 306 72.2
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 2.9e-123 445.7 304 73.0
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 5.0e-123 444.9 306 71.9
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 5.0e-123 444.9 304 72.7
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.1e-122 443.7 304 72.4
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.9e-122 443.0 304 70.4
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.5e-122 442.6 306 71.6
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.2e-122 442.2 306 71.6
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 5.5e-122 441.4 306 71.9
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 7.2e-122 441.0 304 72.7
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.6e-121 439.9 300 72.7
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 2.1e-121 439.5 306 73.2
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 3.6e-121 438.7 304 72.4
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.7e-121 438.3 306 72.9
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 6.1e-121 438.0 304 72.0
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.0e-120 435.6 302 71.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 4.0e-120 435.3 306 71.6
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 8.8e-120 434.1 306 72.9
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.6e-119 432.6 306 72.9
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 4.4e-119 431.8 303 72.3
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.8e-118 429.1 294 73.5
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 4.0e-112 408.7 262 77.1
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.3e-110 403.7 294 68.7
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 3.7e-110 402.1 297 65.7
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 4.8e-110 401.7 304 64.8
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.4e-109 400.2 300 66.0
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 2.4e-109 399.4 306 65.0
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.6e-108 396.7 304 65.1
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 7.7e-108 394.4 247 79.4
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 5.2e-104 381.7 286 67.1
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 2.2e-102 376.3 266 72.2
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.8e-96 356.7 220 81.8
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.7e-94 350.1 240 70.0
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 7.0e-93 344.7 304 57.9
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 1.1e-88 330.9 270 61.9
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 5.8e-87 325.1 230 70.0
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 3.7e-86 322.4 288 57.6
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 6.4e-86 321.6 261 62.8
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 7.8e-84 314.7 295 57.3
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.9e-82 310.1 300 53.3
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.5e-82 309.7 196 78.1
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 3.1e-80 302.8 301 53.8
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.9e-74 283.5 304 53.9
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 4.3e-74 282.3 297 51.9
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.1e-72 277.7 202 68.3
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 9.0e-64 248.1 316 42.7
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.2e-60 237.7 214 59.8
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.0e-51 206.5 144 71.5
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.7e-51 204.9 144 71.5
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.3e-49 201.1 144 70.1
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 2.1e-49 200.3 303 42.9
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 8.4e-46 188.3 317 38.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.1e-43 179.1 144 66.7
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.9e-42 177.2 163 52.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 9.0e-40 168.3 123 67.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-37 161.0 91 81.3
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 5.5e-37 159.1 362 32.6
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.8e-35 154.1 304 32.6
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.6e-33 147.5 264 39.8
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 5.0e-30 136.0 342 30.4
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.7e-25 119.8 97 59.8
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.1e-13 81.6 43 83.7


User provided reference genes

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