Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 9.1e-286 986.1 459 100.0
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 1.3e-260 902.5 446 93.7
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.3e-255 885.9 441 92.1
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.9e-252 874.4 447 90.2
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.9e-252 874.4 447 90.2
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 6.6e-252 873.6 441 90.7
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.4e-249 865.9 442 89.8
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 4.1e-246 854.4 441 88.7
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 6.6e-244 847.0 439 88.6
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.1e-242 842.0 443 86.9
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.8e-242 841.6 443 86.7
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 5.4e-238 827.4 440 85.0
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 2.5e-235 818.5 431 85.2
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 9.5e-235 816.6 443 84.2
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 8.1e-234 813.5 441 83.7
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 2.3e-233 812.0 432 85.2
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.5e-232 809.3 432 84.5
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 2.0e-232 808.9 439 83.1
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.0e-232 808.9 439 82.9
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 2.0e-232 808.9 432 85.0
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 2.0e-232 808.9 432 84.0
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.6e-232 808.5 429 84.8
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 2.6e-232 808.5 432 84.5
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 7.6e-232 807.0 454 80.6
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 2.2e-231 805.4 432 84.3
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 2.9e-231 805.1 436 83.0
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.9e-231 805.1 432 84.7
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 3.7e-231 804.7 458 81.2
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 6.4e-231 803.9 436 83.0
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 6.4e-231 803.9 435 84.4
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 1.1e-230 803.1 433 83.8
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.1e-230 803.1 443 81.7
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 1.4e-230 802.7 434 82.7
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 3.2e-230 801.6 448 81.2
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 4.1e-230 801.2 438 82.4
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 1.2e-229 799.7 431 84.7
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.0e-228 796.6 432 83.8
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.0e-228 796.6 432 82.4
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 1.7e-228 795.8 454 78.2
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.7e-228 795.8 431 84.0
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 1.7e-228 795.8 441 81.9
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.7e-228 795.8 439 81.3
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 2.3e-228 795.4 433 83.8
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 3.0e-228 795.0 440 81.1
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 3.9e-228 794.7 432 83.6
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.1e-228 794.3 432 83.8
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 5.1e-228 794.3 432 83.1
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 6.6e-228 793.9 432 83.1
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 1.1e-227 793.1 446 79.8
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.5e-227 792.7 451 78.7
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 3.3e-227 791.6 432 81.7
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 7.3e-227 790.4 432 82.6
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 9.6e-227 790.0 429 81.4
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 9.6e-227 790.0 432 82.6
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 1.2e-226 789.6 432 82.4
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 3.6e-226 788.1 433 81.3
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 3.6e-226 788.1 429 83.2
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.1e-225 786.6 450 78.0
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.8e-225 785.8 432 81.2
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 1.2e-224 783.1 433 81.3
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 5.8e-224 780.8 444 79.3
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 4.2e-222 774.6 435 80.7
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 3.5e-221 771.5 432 81.0
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 4.6e-221 771.2 432 80.3
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 4.6e-221 771.2 432 80.3
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 6.0e-221 770.8 433 80.8
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 6.0e-221 770.8 433 80.4
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.0e-220 770.0 432 80.3
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 1.3e-220 769.6 432 80.8
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 3.0e-220 768.5 448 77.0
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 6.6e-220 767.3 432 80.3
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 6.6e-220 767.3 464 75.6
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 1.5e-219 766.1 443 78.8
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.5e-219 765.4 463 76.7
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 4.3e-219 764.6 432 79.9
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 5.6e-219 764.2 431 79.8
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 5.6e-219 764.2 433 79.9
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 5.6e-219 764.2 474 73.6
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 5.6e-219 764.2 474 73.6
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 9.6e-219 763.5 432 79.6
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 4.8e-218 761.1 453 77.0
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.2e-216 756.5 438 78.5
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.0e-216 755.7 438 78.5
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 6.4e-215 750.7 434 77.0
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 7.1e-214 747.3 443 75.2
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.6e-213 746.1 458 76.6
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 8.7e-212 740.3 436 76.8
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 9.3e-206 720.3 454 72.5
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 2.5e-203 712.2 479 69.1
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 2.8e-202 708.8 442 73.5
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 1.1e-201 706.8 379 84.7
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 1.1e-201 706.8 377 84.1
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 3.4e-200 701.8 432 74.5
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 3.9e-196 688.3 397 78.1
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 4.8e-194 681.4 433 72.1
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 5.5e-190 667.9 436 70.4
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.6e-186 656.4 417 70.3
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.4e-182 643.3 438 70.1
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 9.4e-182 640.6 432 70.1
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.8e-177 626.3 407 73.5
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 1.0e-172 610.5 384 76.8
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 4.8e-170 601.7 437 62.9
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 9.4e-166 587.4 321 82.2
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.0e-164 583.9 300 88.3
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 4.2e-158 562.0 442 60.9
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 6.8e-156 554.7 294 84.0
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 8.8e-156 554.3 454 59.3
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.0e-151 540.8 284 88.4
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 5.5e-150 535.0 280 84.6
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 4.2e-81 306.2 196 75.5
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.9e-73 280.8 133 95.5
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 4.8e-69 266.2 158 74.7
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.3e-68 262.7 132 87.1
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.1e-65 255.0 171 68.4
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 2.5e-65 253.8 364 44.5
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 2.3e-63 247.3 223 55.2
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 4.8e-61 239.6 302 48.3
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 4.5e-59 233.0 120 86.7
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 3.9e-55 219.9 138 71.7
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 2.8e-53 213.8 139 69.1
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 4.0e-47 193.4 119 77.3
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.7e-45 186.8 118 68.6
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 3.1e-44 183.7 251 46.2
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.0e-31 142.1 83 74.7
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 1.8e-23 114.8 61 83.6
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.0e-23 113.6 85 63.5
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.0e-23 113.6 67 73.1
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 2.0e-22 111.3 179 40.2
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 7.5e-22 109.4 62 79.0
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.9e-20 104.8 105 52.4
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 1.5e-14 85.1 68 60.3
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 4.3e-09 67.0 55 56.4
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 4.7e-08 63.5 43 67.4


User provided reference genes

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