Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.3e-163 579.7 295 100.0
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 1.3e-152 543.1 295 92.9
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 2.0e-137 492.7 296 85.5
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 4.5e-137 491.5 295 85.4
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 5.9e-113 411.4 299 71.9
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 5.9e-113 411.4 299 71.9
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 1.0e-112 410.6 299 71.9
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 1.9e-111 406.4 298 71.5
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 1.9e-111 406.4 299 72.2
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 4.3e-111 405.2 299 70.9
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 9.5e-111 404.1 299 70.2
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.8e-109 399.8 299 70.2
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 4.0e-109 398.7 299 69.9
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 2.2e-107 392.9 296 69.3
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 2.3e-104 382.9 297 69.7
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 2.3e-104 382.9 297 69.0
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 3.9e-104 382.1 297 69.7
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.9e-104 382.1 295 70.2
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.9e-104 382.1 295 70.2
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 6.6e-104 381.3 299 67.2
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 1.1e-103 380.6 295 69.2
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 1.9e-103 379.8 295 69.2
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 2.5e-103 379.4 295 68.8
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 3.3e-103 379.0 295 68.8
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 5.6e-103 378.3 297 68.7
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 5.6e-103 378.3 295 69.8
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 7.3e-103 377.9 300 67.3
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 6.2e-102 374.8 294 69.0
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 2.3e-101 372.9 295 68.1
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 3.1e-101 372.5 299 66.2
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.0e-101 372.1 295 67.8
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 5.2e-101 371.7 294 66.0
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 5.2e-101 371.7 293 67.6
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 8.9e-101 370.9 299 64.9
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 1.2e-100 370.5 299 66.6
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.5e-100 370.2 295 65.8
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.5e-100 370.2 299 65.9
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 2.6e-100 369.4 301 67.1
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.4e-100 369.0 295 67.5
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 5.8e-100 368.2 295 67.1
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 5.8e-100 368.2 295 66.8
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 7.5e-100 367.9 295 67.1
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 7.5e-100 367.9 296 67.9
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 4.9e-99 365.2 299 66.2
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 4.9e-99 365.2 296 67.2
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.4e-99 364.8 295 68.1
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 6.4e-99 364.8 295 67.8
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 1.4e-98 363.6 295 66.1
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.4e-98 363.6 294 66.7
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 1.9e-98 363.2 294 66.7
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.9e-98 363.2 294 66.7
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 2.4e-98 362.8 295 67.5
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 2.4e-98 362.8 296 66.2
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 3.2e-98 362.5 297 65.3
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 3.2e-98 362.5 295 67.1
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 4.1e-98 362.1 294 67.0
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 4.1e-98 362.1 296 64.9
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 5.4e-98 361.7 294 66.3
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 5.4e-98 361.7 294 65.6
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 7.0e-98 361.3 297 66.7
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 7.0e-98 361.3 297 66.7
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.2e-97 360.5 291 64.9
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 1.6e-97 360.1 295 67.8
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.7e-97 359.4 295 65.8
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.7e-97 359.4 294 66.3
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 3.5e-97 359.0 297 66.0
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 7.8e-97 357.8 290 67.6
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 7.8e-97 357.8 295 66.4
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.0e-96 357.5 294 64.6
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.0e-96 357.5 288 66.7
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 3.0e-96 355.9 295 64.1
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 5.1e-96 355.1 294 65.3
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 1.5e-95 353.6 299 64.9
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 1.5e-95 353.6 294 65.0
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 1.5e-95 353.6 294 65.0
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 1.9e-95 353.2 299 63.9
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 2.5e-95 352.8 294 65.6
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 3.3e-95 352.4 295 65.4
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 3.3e-95 352.4 295 65.4
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 3.3e-95 352.4 301 63.8
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 5.6e-95 351.7 294 66.0
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 7.3e-95 351.3 295 64.7
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 7.3e-95 351.3 297 64.3
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.2e-94 350.5 295 64.7
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.2e-94 350.5 296 64.9
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 1.2e-94 350.5 295 64.7
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 2.1e-94 349.7 295 65.4
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 2.8e-94 349.4 295 64.7
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 2.8e-94 349.4 296 64.2
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 2.8e-94 349.4 295 64.4
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 2.8e-94 349.4 295 64.4
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 2.8e-94 349.4 295 64.4
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 3.6e-94 349.0 295 64.4
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 4.7e-94 348.6 288 66.3
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 4.7e-94 348.6 296 63.9
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 4.7e-94 348.6 295 64.4
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 6.2e-94 348.2 295 64.7
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 6.2e-94 348.2 295 64.4
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 8.1e-94 347.8 296 63.9
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 8.1e-94 347.8 295 64.7
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.1e-93 347.4 295 65.1
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 1.4e-93 347.1 301 63.5
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 1.4e-93 347.1 295 64.4
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 1.8e-93 346.7 296 64.5
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 2.3e-93 346.3 295 63.7
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 2.3e-93 346.3 295 63.7
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 2.3e-93 346.3 295 63.7
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 2.3e-93 346.3 295 64.1
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 4.0e-93 345.5 295 64.7
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 5.2e-93 345.1 294 65.0
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 5.2e-93 345.1 295 64.1
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 5.2e-93 345.1 299 62.9
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 1.2e-92 344.0 295 64.7
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 1.2e-92 344.0 296 64.2
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 3.4e-92 342.4 298 63.8
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 4.4e-92 342.0 295 63.4
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 5.8e-92 341.7 297 63.3
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 7.5e-92 341.3 301 62.8
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 7.5e-92 341.3 300 62.7
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 2.9e-91 339.3 298 63.8
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 4.9e-91 338.6 296 61.8
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 6.4e-91 338.2 298 62.8
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 6.4e-91 338.2 293 61.4
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 1.9e-90 336.7 300 60.7
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 3.2e-90 335.9 289 64.0
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 3.2e-90 335.9 289 64.0
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 4.1e-90 335.5 296 61.1
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 7.1e-90 334.7 289 63.7
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 7.8e-89 331.3 283 64.3
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.7e-88 330.1 279 63.4
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 3.0e-88 329.3 297 60.3
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.5e-87 327.0 296 62.5
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.6e-86 323.6 295 61.4
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 4.7e-86 322.0 291 59.5
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 1.2e-84 317.4 302 58.9
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 2.2e-83 313.2 301 57.8
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.9e-83 312.8 295 62.4
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 6.4e-83 311.6 296 60.5
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 8.4e-83 311.2 290 56.9
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 1.9e-82 310.1 301 56.8
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 3.5e-81 305.8 300 56.0
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 3.1e-77 292.7 292 55.8
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.8e-70 269.6 249 60.2
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 2.9e-67 259.6 267 54.7
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 4.3e-63 245.7 283 50.2
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 1.0e-56 224.6 219 60.3
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 1.8e-56 223.8 279 50.2
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 2.3e-56 223.4 282 48.2
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 6.7e-56 221.9 199 62.3
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 1.3e-51 207.6 272 46.3
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 3.2e-50 203.0 285 43.5
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 2.2e-46 190.3 144 68.8
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 2.2e-43 180.3 170 62.4
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 5.0e-43 179.1 126 72.2
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 1.8e-40 170.6 153 59.5
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 2.8e-38 163.3 147 60.5
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 2.4e-37 160.2 268 41.0
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 9.1e-29 131.7 113 62.8
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 8.5e-27 125.2 104 61.5
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 7.2e-26 122.1 128 55.5
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 3.7e-22 109.8 99 62.6
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 3.7e-22 109.8 90 65.6
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 1.9e-18 97.4 335 26.3
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 8.3e-14 82.0 88 55.7
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 8.3e-14 82.0 71 57.7
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 9.4e-10 68.6 72 54.2


User provided reference genes

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