Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G146200 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 2.4e-26 121.3 57 100.0
Phvul.011G146300 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 2.4e-26 121.3 57 100.0
Phvul.011G190800 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 2.1e-22 108.2 54 94.4
Phvul.011G146500 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 1.3e-19 99.0 55 85.5
Phvul.011G190750 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 4.1e-18 94.0 46 93.5
Phvul.011G146600 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 7.6e-17 89.7 46 91.3
Phvul.008G097400 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 2.3e-13 78.2 52 73.1
VMungo1383G1177 Vigna mungo HOM05D009866 ORTHO05D010704 6.7e-13 76.6 52 71.2
EL10Ac7g16461 Beta vulgaris HOM05D009866 ORTHO05D010704 2.2e-11 71.6 50 70.0
Phvul.011G043800 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 4.8e-11 70.5 54 66.7
Potri.018G115200 Populus trichocarpa HOM05D009866 ORTHO05D010704 3.1e-10 67.8 50 64.0
arahy.Tifrunner.gnm1.ann1.L3EAWL Arachis hypogaea HOM05D009866 ORTHO05D010704 6.9e-10 66.6 52 63.5
arahy.Tifrunner.gnm1.ann1.Y2I1N6 Arachis hypogaea HOM05D009866 ORTHO05D010704 6.9e-10 66.6 52 63.5
Glyma.10G067600 Glycine max HOM05D009866 ORTHO05D010704 6.9e-10 66.6 57 57.9
Medtr5g089380 Medicago truncatula HOM05D009866 ORTHO05D010704 7.7e-09 63.2 52 61.5
Medtr5g086360 Medicago truncatula HOM05D009866 ORTHO05D010704 1.0e-08 62.8 55 58.2
Psat7g064440 Pisum sativum HOM05D009866 ORTHO05D010704 1.7e-08 62.0 57 56.1
FAN15G2709 Fragaria x ananassa HOM05D009866 ORTHO05D010704 6.5e-08 60.1 49 61.2
Carub.0004s2361 Capsella rubella HOM05D009866 ORTHO05D010704 1.1e-07 59.3 48 62.5
AL1G57100 Arabidopsis lyrata HOM05D009866 ORTHO05D010704 1.4e-07 58.9 50 62.0
Potri.005G020350 Populus trichocarpa HOM05D009866 ORTHO05D010704 1.4e-07 58.9 53 50.9
Carub.0001s3890 Capsella rubella HOM05D010163 ORTHO05D010704 1.6e-06 55.5 52 55.8
Gohir.A11G030251 Gossypium hirsutum HOM05D010163 ORTHO05D010704 4.7e-06 53.9 50 54.0
Thecc.04G289000 Theobroma cacao HOM05D009866 ORTHO05D010704 4.7e-06 53.9 53 52.8
Glyma.14G050500 Glycine max HOM05D009866 ORTHO05D010704 7.9e-06 53.1 32 78.1


User provided reference genes

Program Settings