Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G146100 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 1.4e-15 85.1 43 100.0
Phvul.011G190900 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 3.2e-15 84.0 42 97.6
Phvul.011G166700 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 7.1e-15 82.8 42 97.6
Phvul.011G191200 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 9.2e-15 82.4 42 95.2
Phvul.011G190000 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 2.7e-14 80.9 42 95.2
Glyma.06G203600 Glycine max HOM05D003716 ORTHO05D006233 1.3e-13 78.6 42 90.5
Phvul.011G146400 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 3.0e-13 77.4 39 97.4
Gohir.D02G057128 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-12 75.5 42 85.7
Gohir.D07G024233 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-12 75.5 42 88.1
Gorai.001G025100 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.1e-12 75.5 42 88.1
Phvul.002G059100 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 2.5e-12 74.3 39 92.3
Gorai.001G025400 Gossypium raimondii HOM05D003716 ORTHO05D006233 3.3e-12 73.9 42 85.7
Ciclev10027385m.g Citrus clementina HOM05D003716 ORTHO05D006233 4.3e-12 73.6 42 85.7
Oeu018531.1 Olea europaea HOM05D003716 ORTHO05D006233 7.3e-12 72.8 42 83.3
Potri.003G175366 Populus trichocarpa HOM05D003716 ORTHO05D006233 7.3e-12 72.8 42 83.3
Gohir.A07G022217 Gossypium hirsutum HOM05D003716 ORTHO05D006233 9.5e-12 72.4 41 85.4
Gorai.001G025200 Gossypium raimondii HOM05D003716 ORTHO05D006233 9.5e-12 72.4 42 83.3
Migut.N02117 Erythranthe guttata HOM05D003716 ORTHO05D006233 1.6e-11 71.6 41 85.4
Gorai.005G064400 Gossypium raimondii HOM05D003716 ORTHO05D006233 2.1e-11 71.2 42 83.3
Gorai.005G187200 Gossypium raimondii HOM05D003716 ORTHO05D006233 2.1e-11 71.2 42 83.3
Manes.11G047250 Manihot esculenta HOM05D003716 ORTHO05D006233 2.1e-11 71.2 38 89.5
CiPaw.02G167700 Carya illinoinensis HOM05D003716 ORTHO05D006233 3.6e-11 70.5 38 89.5
Gohir.A02G052302 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.6e-11 70.5 42 81.0
Prupe.8G172100 Prunus persica HOM05D003716 ORTHO05D006233 3.6e-11 70.5 41 80.5
Sabra15G0015100 Salix brachista HOM05D003716 ORTHO05D006233 3.6e-11 70.5 37 89.2
Gohir.D02G056801 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.7e-11 70.1 42 81.0
Gohir.D02G057325 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.7e-11 70.1 42 81.0
Gohir.D13G104706 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.7e-11 70.1 38 89.5
Gorai.005G063000 Gossypium raimondii HOM05D003716 ORTHO05D006233 4.7e-11 70.1 41 82.9
Gorai.013G117300 Gossypium raimondii HOM05D003716 ORTHO05D006233 4.7e-11 70.1 38 89.5
CiPaw.02G098700 Carya illinoinensis HOM05D003716 ORTHO05D006233 6.2e-11 69.7 41 82.9
Gohir.A11G237900 Gossypium hirsutum HOM05D003716 ORTHO05D006233 6.2e-11 69.7 37 89.2
Medtr1g040060 Medicago truncatula HOM05D003716 ORTHO05D006233 6.2e-11 69.7 37 89.2
Medtr1g040120 Medicago truncatula HOM05D003716 ORTHO05D006233 6.2e-11 69.7 37 89.2
Medtr1g040210 Medicago truncatula HOM05D003716 ORTHO05D006233 6.2e-11 69.7 37 89.2
Gohir.D10G071456 Gossypium hirsutum HOM05D003716 ORTHO05D006233 8.1e-11 69.3 41 82.9
Gohir.A02G051801 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.4e-10 68.6 42 81.0
Gorai.011G076000 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.4e-10 68.6 41 80.5
CiPaw.02G082200 Carya illinoinensis HOM05D003716 ORTHO05D006233 1.8e-10 68.2 42 81.0
Gohir.1Z049428 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.1Z049467 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.1Z049528 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.1Z049632 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.1Z049653 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.1Z049753 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.1Z049832 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.D10G071248 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.D10G071264 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.D10G071336 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.D10G071344 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gohir.D10G071428 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gorai.005G062900 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.8e-10 68.2 42 78.6
Gorai.005G065000 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Gorai.011G075900 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 80.5
Medtr1g040050 Medicago truncatula HOM05D003716 ORTHO05D006233 1.8e-10 68.2 42 78.6
Medtr1g040083 Medicago truncatula HOM05D003716 ORTHO05D006233 1.8e-10 68.2 40 82.5
Prupe.8G171300 Prunus persica HOM05D003716 ORTHO05D006233 1.8e-10 68.2 41 78.0
Gohir.A07G022205 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.3e-10 67.8 42 81.0
Gohir.A07G022221 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.3e-10 67.8 38 84.2
Gohir.D11G248340 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.1e-10 67.4 38 84.2
Gorai.007G264800 Gossypium raimondii HOM05D003716 ORTHO05D006233 3.1e-10 67.4 38 84.2
Gohir.D10G071376 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.0e-10 67.0 41 78.0
Gohir.D10G071384 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.0e-10 67.0 41 78.0
Phvul.003G120550 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 4.0e-10 67.0 36 91.7
Phvul.007G073700 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 4.0e-10 67.0 42 78.6
Gohir.D02G057566 Gossypium hirsutum HOM05D003716 ORTHO05D006233 5.2e-10 66.6 41 78.0
Medtr5g019820 Medicago truncatula HOM05D003716 ORTHO05D006233 6.8e-10 66.2 37 86.5
Medtr1g040087 Medicago truncatula HOM05D003716 ORTHO05D006233 8.9e-10 65.9 39 82.1
Medtr1g040110 Medicago truncatula HOM05D003716 ORTHO05D006233 8.9e-10 65.9 37 83.8
Medtr2g101910 Medicago truncatula HOM05D003716 ORTHO05D006233 8.9e-10 65.9 37 86.5
SEGI_19543 Sequoiadendron giganteum HOM05D003716 ORTHO05D006233 8.9e-10 65.9 41 73.2
Migut.N02390 Erythranthe guttata HOM05D003716 ORTHO05D006233 1.2e-09 65.5 37 86.5
Gohir.D10G071392 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.2e-09 65.5 41 78.0
Phvul.011G191100 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 1.2e-09 65.5 37 86.5
Glyma.05G176800 Glycine max HOM05D003716 ORTHO05D006233 1.5e-09 65.1 36 86.1
Gohir.A13G101505 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.5e-09 65.1 37 86.5
Manes.02G142350 Manihot esculenta HOM05D003716 ORTHO05D006233 1.5e-09 65.1 37 83.8
Aqoxy7G01685 Aquilegia oxysepala HOM05D000045 ORTHO05D006233 2.6e-09 64.3 37 83.8
ClCG03G014910 Citrullus lanatus HOM05D000025 ORTHO05D002339 2.6e-09 64.3 37 81.1
Gohir.D10G071368 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.6e-09 64.3 41 75.6
Prupe.1G384300 Prunus persica HOM05D003716 ORTHO05D006233 2.6e-09 64.3 37 83.8
Gohir.D10G071296 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.4e-09 63.9 39 79.5
Gohir.D10G071304 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.4e-09 63.9 39 79.5
Gohir.D10G071328 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.4e-09 63.9 39 79.5
Gohir.D10G071414 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.4e-09 63.9 39 79.5
Gohir.D10G071442 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.4e-09 63.9 39 79.5
Gorai.011G076700 Gossypium raimondii HOM05D003716 ORTHO05D006233 3.4e-09 63.9 39 79.5
Medtr1g040063 Medicago truncatula HOM05D003716 ORTHO05D006233 3.4e-09 63.9 39 76.9
Gohir.D11G249166 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.4e-09 63.5 37 83.8
Medtr4g118580 Medicago truncatula HOM05D003716 ORTHO05D006233 1.3e-08 62.0 35 85.7
Prupe.1G117300 Prunus persica HOM05D003716 ORTHO05D006233 1.3e-08 62.0 35 85.7
Gohir.D10G071224 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.7e-08 61.6 39 76.9
SHI08175 Sapria himalayana HOM05D003716 ORTHO05D006233 1.7e-08 61.6 35 85.7
SEGI_09146 Sequoiadendron giganteum HOM05D003716 ORTHO05D006233 1.7e-08 61.6 35 82.9
SEGI_10578 Sequoiadendron giganteum HOM05D003716 ORTHO05D006233 1.7e-08 61.6 38 76.3
Gohir.A07G022209 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.9e-08 60.8 37 81.1
Psat7g065960 Pisum sativum HOM05D003716 ORTHO05D006233 1.1e-07 58.9 33 84.8
Medtr1g040077 Medicago truncatula HOM05D000041 ORTHO05D000061 9.2e-07 55.8 29 89.7
arahy.Tifrunner.gnm1.ann1.CF0C3I Arachis hypogaea HOM05D003716 ORTHO05D006233 6.0e-06 53.1 27 96.3
Migut.E00351 Erythranthe guttata HOM05D003716 ORTHO05D006233 6.0e-06 53.1 27 96.3
FAN12G3908 Fragaria x ananassa HOM05D003716 ORTHO05D006233 6.0e-06 53.1 28 89.3
Gohir.D10G071256 Gossypium hirsutum HOM05D003716 ORTHO05D006233 6.0e-06 53.1 26 96.2
Cc00_g35800 Coffea canephora HOM05D003716 ORTHO05D006233 7.8e-06 52.8 27 92.6
Cc02_g22370 Coffea canephora HOM05D003716 ORTHO05D006233 7.8e-06 52.8 27 92.6
Cc03_g00810 Coffea canephora HOM05D003716 ORTHO05D006233 7.8e-06 52.8 27 92.6
Cc08_g05110 Coffea canephora HOM05D003716 ORTHO05D006233 7.8e-06 52.8 27 92.6
Cc08_g05120 Coffea canephora HOM05D003716 ORTHO05D006233 7.8e-06 52.8 27 92.6
Cc11_g08930 Coffea canephora HOM05D003716 ORTHO05D006233 7.8e-06 52.8 27 92.6
Manes.05G096850 Manihot esculenta HOM05D003716 ORTHO05D006233 7.8e-06 52.8 27 92.6
Manes.06G007001 Manihot esculenta HOM05D003716 ORTHO05D006233 7.8e-06 52.8 27 92.6
Sed0025894 Sechium edule HOM05D003716 ORTHO05D006233 7.8e-06 52.8 27 92.6
GSVIVG01007699001 Vitis vinifera HOM05D001815 ORTHO05D001830 7.8e-06 52.8 27 92.6
GSVIVG01013210001 Vitis vinifera HOM05D003716 ORTHO05D006233 7.8e-06 52.8 28 92.9


User provided reference genes

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