Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G145600 Phaseolus vulgaris HOM05D012347 ORTHO05D009427 4.5e-65 251.1 128 100.0
Glyma.06G263300 Glycine max HOM05D012347 ORTHO05D009427 3.8e-32 141.7 139 64.0
Glyma.12G139100 Glycine max HOM05D012347 ORTHO05D009427 4.5e-25 118.2 136 56.6
Lj3g0021987 Lotus japonicus HOM05D012347 ORTHO05D009427 5.9e-25 117.9 134 54.5
Ca_18836_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 4.4e-20 101.7 135 50.4
Ca_30095_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 4.4e-20 101.7 135 50.4
Lalb_Chr19g0134651 Lupinus albus HOM05D012347 ORTHO05D009427 4.4e-20 101.7 140 50.0
Medtr4g081500 Medicago truncatula HOM05D012347 ORTHO05D009427 2.4e-18 95.9 133 47.4
Psat7g160160 Pisum sativum HOM05D012347 ORTHO05D009427 2.9e-16 89.0 135 45.9
TPR.G34097 Trifolium pratense HOM05D012347 ORTHO05D009427 1.4e-13 80.1 135 43.0
CiPaw.11G180600 Carya illinoinensis HOM05D009454 ORTHO05D009427 4.8e-11 71.6 138 39.1
Haze_09576 Corylus avellana HOM05D009454 ORTHO05D009427 4.1e-10 68.6 137 40.9
TPR.G21003 Trifolium pratense HOM05D012347 ORTHO05D009427 4.1e-10 68.6 120 40.8
TAR629G2024 Trochodendron aralioides HOM05D009454 ORTHO05D009427 7.0e-10 67.8 135 37.0
Ciclev10009866m.g Citrus clementina HOM05D009454 ORTHO05D009427 9.1e-10 67.4 147 37.4
arahy.Tifrunner.gnm1.ann1.T2T8RF Arachis hypogaea HOM05D012347 ORTHO05D009427 1.6e-09 66.6 142 37.3
TAR624G0118 Trochodendron aralioides HOM05D009454 ORTHO05D009427 1.6e-09 66.6 132 38.6
Migut.H01874 Erythranthe guttata HOM05D017288 ORTHO05D009427 2.0e-09 66.2 135 40.0
arahy.Tifrunner.gnm1.ann1.4E7PXM Arachis hypogaea HOM05D012347 ORTHO05D009427 2.7e-09 65.9 142 37.3
Dinv10899 Davidia involucrata HOM05D012535 ORTHO05D011476 4.5e-09 65.1 130 38.5
MBI02_g26224_MAGBIO Magnolia biondii HOM05D009454 ORTHO05D009427 1.3e-08 63.5 132 41.7
Prupe.4G197700 Prunus persica HOM05D009454 ORTHO05D009427 1.3e-08 63.5 129 38.8
Hund02152 Selenicereus undatus HOM05D017899 ORTHO05D009427 2.2e-08 62.8 138 39.1
TAR627G0356 Trochodendron aralioides HOM05D009454 ORTHO05D009427 2.9e-08 62.4 140 38.6
arahy.Tifrunner.gnm1.ann1.AXBA9A Arachis hypogaea HOM05D062896 ORTHO05D009427 5.0e-08 61.6 158 32.3
Duzib213G0681 Durio zibethinus HOM05D009454 ORTHO05D009427 6.5e-08 61.2 144 38.2
ClCG10G006150 Citrullus lanatus HOM05D023599 ORTHO05D009427 8.5e-08 60.8 150 34.7
Eucgr.K03519 Eucalyptus grandis HOM05D012347 ORTHO05D009427 1.1e-07 60.5 145 38.6
Gohir.D05G363800 Gossypium hirsutum HOM05D009454 ORTHO05D009427 1.1e-07 60.5 141 39.7
Solyc07g063910.4 Solanum lycopersicum HOM05D017076 ORTHO05D017865 1.5e-07 60.1 134 35.1
Actinidia35306 Actinidia chinensis HOM05D009454 ORTHO05D009427 1.9e-07 59.7 137 40.1
MD11G1229800 Malus domestica HOM05D023596 ORTHO05D009427 2.5e-07 59.3 131 35.1
Glyma.13G284800 Glycine max HOM05D023503 ORTHO05D009427 4.2e-07 58.5 136 37.5
Dinv18549 Davidia involucrata HOM05D014456 ORTHO05D011476 9.4e-07 57.4 129 37.2
Gohir.A04G023500 Gossypium hirsutum HOM05D009454 ORTHO05D009427 9.4e-07 57.4 145 38.6
MSTRG.12947 Avicennia marina HOM05D017288 ORTHO05D009427 1.2e-06 57.0 132 38.6
CSS0036879 Camellia sinensis var. sinensis HOM05D014456 ORTHO05D011476 1.2e-06 57.0 132 33.3
Nn1g06922 Nelumbo nucifera HOM05D009454 ORTHO05D009427 1.6e-06 56.6 132 38.6
Gorai.009G428800 Gossypium raimondii HOM05D009454 ORTHO05D009427 2.7e-06 55.8 145 37.9
TAR626G0489 Trochodendron aralioides HOM05D009454 ORTHO05D009427 2.7e-06 55.8 135 37.0
Dinv03958 Davidia involucrata HOM05D009454 ORTHO05D009427 3.6e-06 55.5 141 38.3
Actinidia10697 Actinidia chinensis HOM05D009454 ORTHO05D009427 4.7e-06 55.1 134 35.8
MELO3C016602.2 Cucumis melo HOM05D023599 ORTHO05D009427 4.7e-06 55.1 150 32.0


User provided reference genes

Program Settings