Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G144700 Phaseolus vulgaris HOM05D000032 ORTHO05D004353 4.8e-48 194.5 123 100.0
Phvul.004G088600 Phaseolus vulgaris HOM05D000032 ORTHO05D004353 3.3e-25 118.6 101 68.3
VMungo0464G0575 Vigna mungo HOM05D000032 ORTHO05D004353 2.4e-23 112.5 102 66.7
Glyma.02G078100 Glycine max HOM05D000032 ORTHO05D004353 5.1e-18 94.7 103 75.7
arahy.Tifrunner.gnm1.ann1.HEZ0TZ Arachis hypogaea HOM05D000032 ORTHO05D004353 4.2e-12 75.1 105 45.7
Psat0s1172g0200 Pisum sativum HOM05D000032 ORTHO05D004353 3.6e-11 72.0 97 45.4
Lj2g0014148 Lotus japonicus HOM05D000032 ORTHO05D004353 4.7e-11 71.6 96 62.5
arahy.Tifrunner.gnm1.ann1.QL8U34 Arachis hypogaea HOM05D000032 ORTHO05D004353 2.3e-10 69.3 118 41.5
Thecc.08G162500 Theobroma cacao HOM05D000032 ORTHO05D004353 2.0e-09 66.2 112 43.8
Sed0016760 Sechium edule HOM05D000032 ORTHO05D004353 3.3e-09 65.5 101 46.5
Ca_04661_v3 Cicer arietinum L. HOM05D000032 ORTHO05D004353 5.7e-09 64.7 120 41.7
Haze_17822 Corylus avellana HOM05D000032 ORTHO05D004353 5.7e-09 64.7 131 40.5
Oeu061450.1 Olea europaea HOM05D000032 ORTHO05D004353 7.4e-09 64.3 121 40.5
Duzib041G0379 Durio zibethinus HOM05D000032 ORTHO05D004353 1.7e-08 63.2 126 41.3
Eucgr.F02678 Eucalyptus grandis HOM05D000032 ORTHO05D004353 1.7e-08 63.2 137 38.7
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 2.2e-08 62.8 94 42.6
PGR042G0719 Punica granatum HOM05D000032 ORTHO05D004353 2.8e-08 62.4 130 37.7
CAN.G2457.3 Capsicum annuum HOM05D000032 ORTHO05D004353 4.8e-08 61.6 96 43.8
Aa31LG9G15000 Aethionema arabicum HOM05D000032 ORTHO05D004353 8.2e-08 60.8 94 40.4
BcaC01g04703 Brassica carinata HOM05D000032 ORTHO05D004353 8.2e-08 60.8 95 42.1
C03p34730 Brassica napus HOM05D000032 ORTHO05D004353 8.2e-08 60.8 95 42.1
BolC3t15783H Brassica oleracea HOM05D000032 ORTHO05D004353 8.2e-08 60.8 95 42.1
Potri.005G198300 Populus trichocarpa HOM05D000032 ORTHO05D004353 8.2e-08 60.8 101 42.6
Cfa018266 Carpinus fangiana HOM05D000032 ORTHO05D004353 1.1e-07 60.5 131 38.9
A03p28720 Brassica napus HOM05D000032 ORTHO05D004353 3.1e-07 58.9 95 41.1
BraA03t12071Z Brassica rapa HOM05D000032 ORTHO05D004353 3.1e-07 58.9 95 41.1
CANSAT25G3453 Cannabis sativa HOM05D000032 ORTHO05D004353 3.1e-07 58.9 100 42.0
Ciclev10000567m.g Citrus clementina HOM05D000032 ORTHO05D004353 3.1e-07 58.9 119 40.3
Manes.02G184400 Manihot esculenta HOM05D000032 ORTHO05D004353 3.1e-07 58.9 125 39.2
THA.LOC104806769 Tarenaya hassleriana HOM05D000032 ORTHO05D004353 3.1e-07 58.9 126 47.6
Cpa.g.sc26.116 Carica papaya HOM05D000032 ORTHO05D004353 5.3e-07 58.2 100 46.0
MD05G1035500 Malus domestica HOM05D000032 ORTHO05D004353 5.3e-07 58.2 110 42.7
MSTRG.24490 Avicennia marina HOM05D000032 ORTHO05D004353 7.0e-07 57.8 125 35.2
Thhalv10028511m.g Eutrema salsugineum HOM05D000032 ORTHO05D004353 7.0e-07 57.8 95 38.9
Manes.02G215070 Manihot esculenta HOM05D000032 ORTHO05D004353 7.0e-07 57.8 104 42.3
Manes.12G146601 Manihot esculenta HOM05D000032 ORTHO05D004353 9.1e-07 57.4 104 42.3
Manes.13G081778 Manihot esculenta HOM05D000032 ORTHO05D004353 9.1e-07 57.4 104 42.3
Nitab4.5_0000872g0170 Nicotiana tabacum HOM05D000032 ORTHO05D004353 9.1e-07 57.4 75 46.7
MD10G1037800 Malus domestica HOM05D000032 ORTHO05D004353 1.2e-06 57.0 112 41.1
Migut.N02946 Erythranthe guttata HOM05D000032 ORTHO05D004353 1.5e-06 56.6 110 40.9
CiPaw.16G007800 Carya illinoinensis HOM05D000032 ORTHO05D004353 2.0e-06 56.2 116 39.7
Gohir.A06G112100 Gossypium hirsutum HOM05D000032 ORTHO05D004353 2.0e-06 56.2 84 44.0
RcHm_v2.0_Chr6g0273971 Rosa chinensis HOM05D000032 ORTHO05D004353 2.0e-06 56.2 124 40.3
unitig_578.g16228 Utricularia gibba HOM05D000032 ORTHO05D004353 2.0e-06 56.2 111 38.7
BcaB01g01423 Brassica carinata HOM05D000032 ORTHO05D004353 3.4e-06 55.5 111 42.3
COL.COLO4_29111 Corchorus olitorius HOM05D000032 ORTHO05D004353 3.4e-06 55.5 118 39.8
Manes.07G106104 Manihot esculenta HOM05D000032 ORTHO05D004353 3.4e-06 55.5 104 41.3
ClCG09G010260 Citrullus lanatus HOM05D000032 ORTHO05D004353 4.5e-06 55.1 75 48.0
Sp6g07880 Schrenkiella parvula HOM05D000032 ORTHO05D004353 4.5e-06 55.1 96 37.5
vmacro22652 Vaccinium macrocarpon HOM05D000032 ORTHO05D004353 4.5e-06 55.1 114 48.2
CARHR260710 Cardamine hirsuta HOM05D000032 ORTHO05D004353 5.9e-06 54.7 98 36.7
Dinv41025 Davidia involucrata HOM05D000032 ORTHO05D004353 5.9e-06 54.7 137 36.5
Gohir.D06G116300 Gossypium hirsutum HOM05D000032 ORTHO05D004353 5.9e-06 54.7 84 45.2
Gorai.010G134100 Gossypium raimondii HOM05D000032 ORTHO05D004353 5.9e-06 54.7 84 45.2
Hund26675 Selenicereus undatus HOM05D000032 ORTHO05D004353 5.9e-06 54.7 100 40.0
QL02p037084 Quercus lobata HOM05D000032 ORTHO05D004353 7.7e-06 54.3 133 38.3


User provided reference genes

Program Settings