Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G137300 Phaseolus vulgaris HOM05D023402 ORTHO05D017067 5.7e-28 126.7 58 100.0
Phvul.002G065828 Phaseolus vulgaris HOM05D023402 ORTHO05D017067 2.4e-26 121.3 57 96.5
Phvul.003G083800 Phaseolus vulgaris HOM05D023402 ORTHO05D017067 1.5e-23 112.1 58 86.2
Phvul.005G111650 Phaseolus vulgaris HOM05D000014 ORTHO05D000016 9.8e-20 99.4 54 77.8
Phvul.011G141000 Phaseolus vulgaris HOM05D023402 ORTHO05D017067 9.2e-18 92.8 52 78.8
Phvul.008G172600 Phaseolus vulgaris HOM05D023402 ORTHO05D017067 1.2e-17 92.4 52 76.9
Phvul.008G165150 Phaseolus vulgaris HOM05D000014 ORTHO05D013897 2.0e-17 91.7 53 73.6
TPR.G15155 Trifolium pratense HOM05D000014 ORTHO05D011222 4.9e-11 70.5 56 48.2
TPR.G37356 Trifolium pratense HOM05D000014 ORTHO05D011222 4.9e-11 70.5 56 48.2
TPR.G11378 Trifolium pratense HOM05D000014 ORTHO05D000016 4.1e-10 67.4 56 46.4
TPR.G30395 Trifolium pratense HOM05D008332 ORTHO05D010135 4.1e-10 67.4 56 46.4
TPR.G18342 Trifolium pratense HOM05D000014 ORTHO05D011222 1.2e-09 65.9 56 46.4
TPR.G39681 Trifolium pratense HOM05D000014 ORTHO05D000016 2.1e-09 65.1 56 46.4
TPR.G29193 Trifolium pratense HOM05D000014 ORTHO05D011222 3.5e-09 64.3 56 42.9
TPR.G6823 Trifolium pratense HOM05D000014 ORTHO05D011222 8.6e-08 59.7 56 41.1
VMungo0464G1563 Vigna mungo HOM05D003301 ORTHO05D003665 1.1e-07 59.3 57 45.6
PGSC0003DMG400039434 Solanum tuberosum HOM05D000303 ORTHO05D000977 1.9e-07 58.5 54 42.6
VMungo1127G0449 Vigna mungo HOM05D000014 ORTHO05D000016 1.9e-07 58.5 54 48.1
CSS0008445 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 4.3e-07 57.4 56 44.6
Lalb_Chr09g0333521 Lupinus albus HOM05D008332 ORTHO05D017067 4.3e-07 57.4 48 50.0
CANSAT54G1893 Cannabis sativa HOM05D000014 ORTHO05D000016 9.5e-07 56.2 55 47.3
ClCG01G011700 Citrullus lanatus HOM05D000014 ORTHO05D000016 1.2e-06 55.8 54 42.6
PGSC0003DMG400040686 Solanum tuberosum HOM05D000303 ORTHO05D000977 1.2e-06 55.8 51 45.1
CSS0040149 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 2.1e-06 55.1 56 44.6
PGSC0003DMG400041331 Solanum tuberosum HOM05D000303 ORTHO05D000977 2.1e-06 55.1 54 42.6
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 2.8e-06 54.7 56 41.1
CSS0003442 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 2.8e-06 54.7 56 42.9
PGSC0003DMG400039310 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.6e-06 54.3 45 48.9
ClCG04G002730 Citrullus lanatus HOM05D000014 ORTHO05D000016 4.7e-06 53.9 54 40.7
ClCG07G009550 Citrullus lanatus HOM05D013832 ORTHO05D000016 4.7e-06 53.9 49 44.9
Medtr3g010640 Medicago truncatula HOM05D008332 ORTHO05D017067 4.7e-06 53.9 48 45.8
QL10p061586 Quercus lobata HOM05D000014 ORTHO05D000016 4.7e-06 53.9 56 46.4
TWI15G0694 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 4.7e-06 53.9 56 41.1
ClCG00G000630 Citrullus lanatus HOM05D000014 ORTHO05D000016 8.1e-06 53.1 54 42.6


User provided reference genes

Program Settings