Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 3.9e-263 911.0 482 100.0
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.0e-178 630.6 435 81.1
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 6.6e-162 574.7 575 59.5
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 6.3e-112 408.7 571 48.7
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.0e-106 391.3 575 46.6
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 3.4e-97 359.8 495 47.9
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 5.9e-86 322.4 493 45.0
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 2.9e-77 293.5 501 45.1
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.5e-73 281.2 487 45.2
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 2.2e-72 277.3 493 44.0
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 3.6e-51 206.8 496 35.5
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 2.6e-41 174.1 499 32.1
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 2.6e-41 174.1 483 32.9
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 7.6e-41 172.6 498 34.7
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.9e-41 172.2 482 33.6
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 2.9e-40 170.6 500 32.2
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 4.9e-40 169.9 488 32.2
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 4.9e-40 169.9 484 33.3
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 4.9e-40 169.9 448 33.0
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 1.2e-38 165.2 504 32.7
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 1.6e-38 164.9 496 33.7
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 1.3e-37 161.8 496 31.7
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.9e-37 160.2 447 30.4
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 3.9e-37 160.2 438 31.1
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.1e-36 158.7 466 32.6
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 3.3e-36 157.1 507 31.8
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 5.6e-36 156.4 475 33.3
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 7.3e-36 156.0 485 29.3
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 9.6e-36 155.6 529 30.6
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.1e-34 152.1 467 32.8
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 2.6e-33 147.5 490 31.4
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.8e-32 143.7 484 31.8
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 8.4e-32 142.5 479 28.8
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 3.2e-31 140.6 393 32.6
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 2.1e-30 137.9 511 28.2
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 6.7e-29 132.9 500 31.2
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 1.1e-28 132.1 412 32.0
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 8.1e-27 125.9 483 29.2
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 1.4e-26 125.2 415 29.4
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 2.4e-26 124.4 446 32.5
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 1.2e-25 122.1 433 30.3
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 7.6e-25 119.4 456 30.5
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 4.9e-24 116.7 492 30.3
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 5.5e-23 113.2 500 28.8
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 9.3e-23 112.5 474 27.2
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 7.4e-20 102.8 339 31.0
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 2.8e-19 100.9 227 36.1
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 8.2e-19 99.4 452 28.1
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 8.2e-19 99.4 505 26.7
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 8.2e-19 99.4 529 26.3
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 1.1e-18 99.0 418 30.4
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 1.8e-18 98.2 243 37.4
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 3.1e-18 97.4 498 28.3
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 6.9e-18 96.3 102 49.0
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 3.4e-17 94.0 228 35.1
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 5.8e-17 93.2 510 25.7
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 1.0e-16 92.4 101 49.5
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.0e-16 92.4 436 28.7
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 1.0e-16 92.4 425 27.3
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 2.9e-16 90.9 543 24.3
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 3.8e-16 90.5 228 36.0
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 7.2e-15 86.3 218 33.9
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 7.9e-14 82.8 427 27.4
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 1.3e-13 82.0 97 46.4
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 3.9e-13 80.5 325 28.6
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 5.1e-13 80.1 454 27.8
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 5.1e-13 80.1 321 28.3
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.1e-12 79.0 403 27.5
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 4.3e-12 77.0 313 30.0
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 1.6e-11 75.1 88 46.6
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 1.4e-10 72.0 315 28.6
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 2.0e-09 68.2 463 26.3
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 2.6e-09 67.8 458 23.6
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 1.0e-08 65.9 135 37.0
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 1.7e-08 65.1 393 26.7
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 2.1e-06 58.2 142 35.2
Pp3c23_14950 Physcomitrium patens HOM05D020562 ORTHO05D030110 2.7e-06 57.8 91 35.2
SMO137G0065 Selaginella moellendorffii HOM05D020562 ORTHO05D030110 2.7e-06 57.8 185 33.0


User provided reference genes

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