Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G136900 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 3.8e-61 238.0 125 100.0
VMungo1127G2104 Vigna mungo HOM05D002846 ORTHO05D002692 7.0e-47 190.7 112 88.4
Lj3g0000319 Lotus japonicus HOM05D027495 ORTHO05D030011 4.9e-24 114.8 113 60.2
Glyma.12G133300 Glycine max HOM05D002846 ORTHO05D002692 8.3e-24 114.0 112 62.5
Glyma.06G271700 Glycine max HOM05D002846 ORTHO05D002692 3.4e-17 92.0 66 77.3
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 5.8e-17 91.3 124 51.6
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 2.7e-14 82.4 111 49.5
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 6.0e-14 81.3 133 49.6
Glyma.12G212900 Glycine max HOM05D002846 ORTHO05D002692 1.1e-12 77.0 122 46.7
Psat5g251520 Pisum sativum HOM05D002846 ORTHO05D002692 2.5e-12 75.9 131 45.8
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 3.3e-12 75.5 117 49.6
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 4.3e-12 75.1 95 52.6
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 5.6e-12 74.7 117 46.2
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 7.3e-12 74.3 108 49.1
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 2.8e-11 72.4 102 50.0
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 3.6e-11 72.0 118 46.6
Ciclev10009727m.g Citrus clementina HOM05D002846 ORTHO05D002692 1.1e-10 70.5 112 46.4
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 1.1e-10 70.5 121 48.8
CiPaw.11G185800 Carya illinoinensis HOM05D002846 ORTHO05D002692 1.4e-10 70.1 124 44.4
Glyma.13G288700 Glycine max HOM05D002846 ORTHO05D002692 1.4e-10 70.1 119 44.5
MBI02_g23957_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 1.4e-10 70.1 127 44.1
TPR.G19979 Trifolium pratense HOM05D002846 ORTHO05D002692 1.4e-10 70.1 134 41.8
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.4e-10 70.1 114 46.5
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 4.0e-10 68.6 115 44.3
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 1.2e-09 67.0 95 49.5
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 1.2e-09 67.0 109 43.1
DCAR_019769 Daucus carota HOM05D002846 ORTHO05D002692 1.2e-09 67.0 99 49.5
CiPaw.12G127500 Carya illinoinensis HOM05D002846 ORTHO05D002692 1.5e-09 66.6 93 49.5
Manes.03G127850 Manihot esculenta HOM05D002846 ORTHO05D002692 2.6e-09 65.9 138 37.7
Lalb_Chr19g0134811 Lupinus albus HOM05D002846 ORTHO05D002692 4.4e-09 65.1 119 47.1
ECA246G4222 Erigeron canadensis HOM05D002846 ORTHO05D002692 5.8e-09 64.7 98 45.9
Nn1g03606 Nelumbo nucifera HOM05D002846 ORTHO05D002692 5.8e-09 64.7 113 46.0
CiPaw.11G185600 Carya illinoinensis HOM05D002846 ORTHO05D002692 7.5e-09 64.3 124 44.4
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 7.5e-09 64.3 120 44.2
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.3e-08 63.5 124 41.9
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 2.2e-08 62.8 103 42.7
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 2.2e-08 62.8 107 43.9
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 4.9e-08 61.6 107 39.3
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 4.9e-08 61.6 97 44.3
VMungo1080G0677 Vigna mungo HOM05D002846 ORTHO05D002692 4.9e-08 61.6 111 44.1
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 6.4e-08 61.2 109 40.4
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 6.4e-08 61.2 113 40.7
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 8.3e-08 60.8 110 42.7
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 8.3e-08 60.8 114 44.7
MSTRG.6900 Avicennia marina HOM05D024717 ORTHO05D002692 1.1e-07 60.5 114 40.4
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 1.1e-07 60.5 117 40.2
MBI18_g03004_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 1.1e-07 60.5 122 38.5
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.1e-07 60.5 116 40.5
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.4e-07 60.1 92 47.8
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 1.4e-07 60.1 99 44.4
Dinv02736 Davidia involucrata HOM05D002846 ORTHO05D002692 1.9e-07 59.7 112 43.8
Lalb_Chr19g0135751 Lupinus albus HOM05D002846 ORTHO05D002692 1.9e-07 59.7 94 47.9
TWI39G1011 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.9e-07 59.7 124 39.5
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 2.4e-07 59.3 131 38.9
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 3.2e-07 58.9 116 45.7
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 3.2e-07 58.9 94 42.6
Eucgr.F00971 Eucalyptus grandis HOM05D002846 ORTHO05D002692 4.1e-07 58.5 116 42.2
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 4.1e-07 58.5 93 45.2
Psat7g162960 Pisum sativum HOM05D027495 ORTHO05D030011 4.1e-07 58.5 80 51.2
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 5.4e-07 58.2 109 40.4
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 5.4e-07 58.2 116 40.5
Eucgr.A01716 Eucalyptus grandis HOM05D002846 ORTHO05D002692 5.4e-07 58.2 102 44.1
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 7.1e-07 57.8 109 43.1
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 7.1e-07 57.8 113 37.2
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 9.2e-07 57.4 106 42.5
Lj1A758T10 Lonicera japonica HOM05D002846 ORTHO05D002692 1.2e-06 57.0 115 35.7
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 1.2e-06 57.0 103 42.7
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 1.6e-06 56.6 101 42.6
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 2.1e-06 56.2 109 45.9
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 2.1e-06 56.2 113 43.4
Rhsim06G0159700 Rhododendron simsii HOM05D002846 ORTHO05D002692 2.1e-06 56.2 119 39.5
Carub.0003s2176 Capsella rubella HOM05D002846 ORTHO05D002692 3.5e-06 55.5 99 43.4
Ca_26241_v3 Cicer arietinum L. HOM05D002846 ORTHO05D002692 3.5e-06 55.5 93 44.1
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 3.5e-06 55.5 95 43.2
Medtr4g046870 Medicago truncatula HOM05D002846 ORTHO05D002692 3.5e-06 55.5 103 41.7
Potri.002G230300 Populus trichocarpa HOM05D002846 ORTHO05D002692 3.5e-06 55.5 114 43.0
RhsimUnG0010900 Rhododendron simsii HOM05D002846 ORTHO05D002692 3.5e-06 55.5 115 40.0
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 4.6e-06 55.1 114 38.6
Manes.13G071601 Manihot esculenta HOM05D002846 ORTHO05D002692 4.6e-06 55.1 105 42.9
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 6.0e-06 54.7 114 38.6
Medtr4g080780 Medicago truncatula HOM05D027495 ORTHO05D030011 6.0e-06 54.7 123 40.7


User provided reference genes

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