Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 8.9e-44 179.9 90 100.0
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 3.0e-39 164.9 90 91.1
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 2.1e-37 158.7 90 86.7
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 5.2e-36 154.1 90 83.3
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 7.5e-35 150.2 87 82.8
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 7.5e-35 150.2 87 82.8
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 2.9e-34 148.3 87 80.5
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 2.9e-34 148.3 87 80.5
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 3.7e-34 147.9 87 81.6
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 3.2e-33 144.8 87 80.5
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 1.2e-32 142.9 87 78.2
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 2.3e-31 138.7 77 87.0
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 8.6e-31 136.7 87 78.2
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 5.6e-30 134.0 85 77.6
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 4.7e-29 131.0 81 76.5
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 6.2e-29 130.6 81 76.5
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 1.1e-28 129.8 81 75.3
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 1.1e-28 129.8 81 75.3
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 1.1e-28 129.8 85 77.6
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 1.1e-28 129.8 81 76.5
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 1.4e-28 129.4 81 77.8
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 1.4e-28 129.4 81 77.8
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.4e-28 129.4 81 77.8
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 1.8e-28 129.0 81 76.5
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 1.8e-28 129.0 81 76.5
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 2.3e-28 128.6 81 77.8
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 3.1e-28 128.3 81 76.5
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 4.0e-28 127.9 81 77.8
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 4.0e-28 127.9 81 75.3
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 4.0e-28 127.9 81 77.8
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 5.2e-28 127.5 81 76.5
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 6.8e-28 127.1 81 76.5
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 6.8e-28 127.1 81 75.3
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 6.8e-28 127.1 81 75.3
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 8.9e-28 126.7 85 74.1
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 8.9e-28 126.7 81 74.1
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 8.9e-28 126.7 81 76.5
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.2e-27 126.3 81 74.1
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 1.5e-27 125.9 87 71.3
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 2.0e-27 125.6 81 72.8
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 2.0e-27 125.6 81 74.1
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 2.6e-27 125.2 81 72.8
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 2.6e-27 125.2 81 75.3
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 2.6e-27 125.2 81 74.1
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 2.6e-27 125.2 81 72.8
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 2.6e-27 125.2 81 74.1
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 3.4e-27 124.8 81 74.1
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 3.4e-27 124.8 81 74.1
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 4.4e-27 124.4 81 74.1
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 5.8e-27 124.0 87 70.1
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 5.8e-27 124.0 87 70.1
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 5.8e-27 124.0 87 70.1
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 5.8e-27 124.0 81 72.8
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 7.5e-27 123.6 81 70.4
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 7.5e-27 123.6 81 72.8
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 9.9e-27 123.2 87 72.4
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 9.9e-27 123.2 81 70.4
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 1.7e-26 122.5 81 71.6
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 1.7e-26 122.5 81 70.4
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 1.7e-26 122.5 81 70.4
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 1.7e-26 122.5 81 70.4
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 2.2e-26 122.1 81 71.6
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 2.2e-26 122.1 81 72.8
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 2.9e-26 121.7 85 69.4
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 2.9e-26 121.7 87 71.3
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 2.9e-26 121.7 81 72.8
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 3.7e-26 121.3 81 69.1
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 3.7e-26 121.3 81 71.6
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 3.7e-26 121.3 81 71.6
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 4.9e-26 120.9 78 76.9
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 4.9e-26 120.9 78 76.9
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 4.9e-26 120.9 81 70.4
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 6.4e-26 120.6 81 70.4
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 6.4e-26 120.6 81 69.1
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 1.1e-25 119.8 81 66.7
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.4e-25 119.4 81 67.9
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 3.2e-25 118.2 86 67.4
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 5.4e-25 117.5 81 66.7
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 5.4e-25 117.5 77 75.3
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 1.2e-24 116.3 81 70.4
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 2.1e-24 115.5 77 72.7
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 2.1e-24 115.5 85 67.1
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 4.6e-24 114.4 87 67.8
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 3.0e-23 111.7 78 70.5
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 3.0e-23 111.7 77 67.5
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 8.6e-23 110.2 81 65.4
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 1.5e-22 109.4 81 64.2
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 2.5e-22 108.6 81 64.2
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 4.3e-22 107.8 69 76.8
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 9.5e-22 106.7 83 62.7
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 2.1e-21 105.5 89 64.0
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 2.8e-21 105.1 83 60.2
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 1.1e-20 103.2 83 59.0
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 3.1e-20 101.7 83 57.8
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 4.0e-20 101.3 79 64.6
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 6.8e-20 100.5 64 78.1
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 6.8e-20 100.5 83 56.6
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 8.9e-20 100.1 83 56.6
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 1.2e-19 99.8 83 56.6
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 2.0e-19 99.0 83 55.4
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 2.0e-19 99.0 83 55.4
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 2.0e-19 99.0 83 55.4
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 2.0e-19 99.0 83 55.4
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 5.8e-19 97.4 66 68.2
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 7.6e-19 97.1 83 54.2
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 1.3e-18 96.3 83 54.2
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 1.3e-18 96.3 83 54.2
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 4.9e-18 94.4 86 53.5
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 1.4e-17 92.8 81 54.3
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 6.0e-16 87.4 81 55.6
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 1.1e-14 83.2 55 72.7
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.9e-14 82.4 68 58.8
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 3.3e-14 81.6 84 53.6
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 1.1e-12 76.6 56 69.6
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 2.4e-12 75.5 83 47.0
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 2.4e-12 75.5 50 70.0
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 9.0e-12 73.6 84 50.0
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 4.9e-10 67.8 53 64.2
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 4.9e-10 67.8 45 73.3
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 4.9e-10 67.8 45 73.3
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 8.4e-10 67.0 45 68.9
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 2.7e-08 62.0 55 56.4


User provided reference genes

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