Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 2.5e-214 748.4 365 100.0
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 8.2e-197 690.3 343 98.8
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 2.9e-194 681.8 343 96.8
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 2.5e-193 678.7 343 96.5
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 2.3e-191 672.2 343 95.0
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 3.8e-186 654.8 346 89.9
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 3.8e-186 654.8 345 91.9
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 2.1e-184 649.0 346 89.6
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 1.8e-183 646.0 346 89.3
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 3.0e-183 645.2 345 89.9
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 4.5e-179 631.3 345 87.0
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 7.7e-179 630.6 345 86.7
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 6.5e-178 627.5 345 86.4
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 2.1e-176 622.5 341 86.5
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 1.5e-174 616.3 345 84.3
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 1.3e-173 613.2 345 84.6
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 1.3e-173 613.2 345 83.8
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 2.2e-173 612.5 345 82.6
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 3.7e-173 611.7 345 82.3
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 8.3e-173 610.5 346 82.9
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 1.4e-172 609.8 345 82.0
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 1.8e-172 609.4 344 83.1
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 2.4e-172 609.0 342 84.8
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 4.1e-172 608.2 345 82.3
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 9.1e-172 607.1 342 83.9
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 1.2e-171 606.7 342 83.3
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 1.0e-170 603.6 346 82.1
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 1.7e-170 602.8 346 82.7
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 2.2e-170 602.4 344 81.7
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 6.5e-170 600.9 342 82.2
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 6.5e-170 600.9 342 82.2
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 6.5e-170 600.9 342 82.5
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 6.5e-170 600.9 344 81.7
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 8.5e-170 600.5 342 82.2
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 1.1e-169 600.1 345 82.0
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 1.1e-169 600.1 346 82.4
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 1.5e-169 599.7 342 82.5
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 1.9e-169 599.4 341 84.2
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 1.9e-169 599.4 345 82.3
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 2.5e-169 599.0 341 82.7
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 3.2e-169 598.6 343 81.9
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 5.5e-169 597.8 342 81.9
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 7.2e-169 597.4 345 80.9
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 1.2e-168 596.7 341 83.3
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 1.6e-168 596.3 342 81.6
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 2.1e-168 595.9 342 81.6
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 2.1e-168 595.9 346 80.6
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 3.6e-168 595.1 342 82.2
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 4.7e-168 594.7 344 81.7
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 6.1e-168 594.3 345 80.9
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 1.0e-167 593.6 342 82.2
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 1.0e-167 593.6 342 82.5
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 3.0e-167 592.0 341 80.9
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 4.0e-167 591.7 341 80.9
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 5.2e-167 591.3 341 81.2
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 5.2e-167 591.3 341 82.1
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.2e-166 590.1 341 82.1
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.2e-166 590.1 341 82.1
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.5e-166 589.7 342 81.3
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 2.0e-166 589.3 341 80.9
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 2.6e-166 589.0 342 80.1
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 3.4e-166 588.6 342 81.0
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 4.4e-166 588.2 341 81.8
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 5.7e-166 587.8 341 80.1
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 7.5e-166 587.4 342 81.0
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 7.5e-166 587.4 341 80.6
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 9.8e-166 587.0 342 80.7
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 1.7e-165 586.3 342 80.4
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 1.7e-165 586.3 342 82.5
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 3.7e-165 585.1 354 80.2
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 4.8e-165 584.7 341 80.6
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 4.8e-165 584.7 342 80.4
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 1.1e-164 583.6 353 78.8
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 1.4e-164 583.2 341 80.4
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 1.8e-164 582.8 340 81.8
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 5.4e-164 581.3 359 78.3
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 1.2e-163 580.1 341 78.3
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 1.6e-163 579.7 341 80.1
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 3.5e-163 578.6 341 79.5
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 4.5e-163 578.2 341 80.6
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 7.7e-163 577.4 342 81.0
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 1.3e-162 576.6 342 78.7
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 1.3e-162 576.6 341 78.3
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 2.3e-162 575.9 356 77.0
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 2.3e-162 575.9 342 78.1
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 1.1e-161 573.5 345 77.7
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 2.5e-161 572.4 308 89.9
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 5.5e-161 571.2 341 78.9
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 1.2e-160 570.1 347 79.0
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 1.0e-159 567.0 341 78.3
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 1.0e-159 567.0 322 83.2
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 6.8e-159 564.3 389 70.4
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 4.4e-158 561.6 341 78.3
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 7.5e-158 560.8 342 78.1
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 9.8e-158 560.5 341 77.7
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 3.7e-157 558.5 350 76.9
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 5.4e-156 554.7 358 75.7
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 7.8e-155 550.8 435 65.1
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 2.9e-154 548.9 340 76.8
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 6.1e-152 541.2 353 73.7
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 4.0e-151 538.5 348 75.6
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 3.4e-150 535.4 444 61.9
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 4.4e-150 535.0 341 73.6
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 4.4e-142 508.4 341 73.0
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 9.8e-142 507.3 339 72.0
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 2.2e-141 506.1 342 71.9
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 1.9e-137 493.0 339 70.2
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 2.0e-134 483.0 341 70.1
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 9.9e-134 480.7 273 82.4
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 6.2e-128 461.5 327 67.0
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.4e-124 449.5 253 83.0
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 8.7e-122 441.0 253 81.0
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 5.6e-121 438.3 347 64.3
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 2.0e-118 429.9 339 61.9
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 6.0e-115 418.3 309 68.6
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 6.0e-115 418.3 309 68.6
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 5.1e-114 415.2 381 58.3
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 8.1e-112 407.9 231 80.5
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 3.8e-109 399.1 228 81.6
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 4.6e-107 392.1 339 56.0
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.7e-101 373.6 318 61.0
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 4.9e-101 372.1 343 58.6
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 6.5e-101 371.7 245 73.1
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 1.6e-99 367.1 342 55.0
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 6.5e-93 345.1 339 52.5
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 6.1e-91 338.6 254 67.7
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 1.3e-85 320.9 189 81.0
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 7.9e-83 311.6 190 77.4
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 5.3e-79 298.9 170 81.8
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 3.2e-76 289.7 221 67.4
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 6.1e-59 232.3 157 71.3
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 1.2e-54 218.0 134 76.1
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 8.5e-53 211.8 112 85.7
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 1.2e-51 208.0 340 39.1
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 2.1e-51 207.2 117 81.2
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 5.0e-45 186.0 94 93.6
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 2.2e-40 170.6 99 79.8
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 9.2e-39 165.2 276 40.2
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 9.2e-39 165.2 358 33.5
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-26 125.2 81 82.7
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 5.4e-23 112.8 95 58.9
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 3.0e-21 107.1 87 65.5
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 6.6e-21 105.9 255 32.5
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.6e-19 101.3 169 40.2
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 2.4e-15 87.4 45 88.9
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 3.6e-11 73.6 47 68.1


User provided reference genes

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