Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 1.7e-29 132.1 72 100.0
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 1.2e-22 109.4 72 80.6
Glyma.06G293200 Glycine max HOM05D005953 ORTHO05D004056 1.2e-19 99.4 72 75.0
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.1e-17 92.8 73 74.0
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 1.3e-16 89.4 73 69.9
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 2.5e-12 75.1 73 61.6
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 9.4e-12 73.2 72 61.1
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.1e-11 72.0 73 67.1
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 6.1e-11 70.5 74 58.1
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 3.0e-10 68.2 73 61.6
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 8.8e-10 66.6 73 61.6
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.1e-09 66.2 77 53.2
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 2.0e-09 65.5 83 53.0
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 3.3e-09 64.7 72 62.5
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 4.3e-09 64.3 76 51.3
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 5.7e-09 63.9 80 51.2
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 5.7e-09 63.9 91 49.5
TPR.G24421 Trifolium pratense HOM05D005953 ORTHO05D004056 7.4e-09 63.5 72 52.8
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 9.7e-09 63.2 73 54.8
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 9.7e-09 63.2 73 56.2
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 1.7e-08 62.4 75 52.0
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 2.2e-08 62.0 74 51.4
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 2.8e-08 61.6 77 50.6
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 2.8e-08 61.6 74 51.4
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 4.8e-08 60.8 79 48.1
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 1.1e-07 59.7 74 45.9
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 1.1e-07 59.7 73 53.4
Ca_17688_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 1.8e-07 58.9 72 55.6
Psat2g130600 Pisum sativum HOM05D008304 ORTHO05D004056 1.8e-07 58.9 72 54.2
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 2.4e-07 58.5 72 51.4
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 2.4e-07 58.5 72 51.4
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 3.1e-07 58.2 76 50.0
Sed0015284 Sechium edule HOM05D005953 ORTHO05D004056 3.1e-07 58.2 75 53.3
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 4.1e-07 57.8 76 48.7
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 4.1e-07 57.8 80 50.0
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 5.3e-07 57.4 81 48.1
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 5.3e-07 57.4 77 51.9
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 6.9e-07 57.0 85 45.9
Potri.013G131900 Populus trichocarpa HOM05D005953 ORTHO05D004056 9.1e-07 56.6 75 50.7
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 9.1e-07 56.6 76 46.1
ATR0304G024 Amborella trichopoda HOM05D005953 ORTHO05D004056 1.2e-06 56.2 75 45.3
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.2e-06 56.2 82 50.0
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 2.0e-06 55.5 79 46.8
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 2.6e-06 55.1 80 45.0
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.6e-06 55.1 72 51.4
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.6e-06 55.1 73 50.7
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 2.6e-06 55.1 73 50.7
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.6e-06 55.1 80 48.8
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 2.6e-06 55.1 82 43.9
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 3.4e-06 54.7 81 46.9
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 3.4e-06 54.7 72 45.8
arahy.Tifrunner.gnm1.ann1.GJ3E3V Arachis hypogaea HOM05D005953 ORTHO05D004056 4.5e-06 54.3 73 50.7
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 4.5e-06 54.3 79 44.3
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.5e-06 54.3 81 50.6
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 4.5e-06 54.3 76 48.7
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 5.9e-06 53.9 75 49.3
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 5.9e-06 53.9 84 47.6
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 7.7e-06 53.5 72 47.2
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 7.7e-06 53.5 79 48.1
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 7.7e-06 53.5 77 53.2


User provided reference genes

Program Settings