Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G109200 Phaseolus vulgaris HOM05D010583 ORTHO05D010238 2.0e-141 505.8 252 100.0
VMungo1127G2259 Vigna mungo HOM05D010583 ORTHO05D010238 1.1e-115 420.2 251 86.9
Glyma.12G104200 Glycine max HOM05D010583 ORTHO05D010238 4.6e-90 335.1 262 70.6
Glyma.06G300500 Glycine max HOM05D010583 ORTHO05D010238 2.3e-89 332.8 253 73.1
Lj3g0010497 Lotus japonicus HOM05D010583 ORTHO05D010238 1.5e-35 154.1 225 45.3
TPR.G30079 Trifolium pratense HOM05D010583 ORTHO05D010238 1.2e-34 151.0 213 49.8
TPR.G30075 Trifolium pratense HOM05D010583 ORTHO05D010238 2.3e-33 146.7 215 49.8
Lalb_Chr03g0029051 Lupinus albus HOM05D010583 ORTHO05D010238 5.7e-32 142.1 222 42.3
Psat7g148000 Pisum sativum HOM05D010583 ORTHO05D010238 6.1e-26 122.1 214 47.2
Medtr0048s0220 Medicago truncatula HOM05D010583 ORTHO05D010238 3.1e-25 119.8 232 41.4
Medtr0185s0010 Medicago truncatula HOM05D010583 ORTHO05D010238 3.1e-25 119.8 234 42.7
Medtr2g089380 Medicago truncatula HOM05D014616 ORTHO05D010238 2.4e-22 110.2 214 40.2
TPR.G30077 Trifolium pratense HOM05D010583 ORTHO05D010238 2.7e-21 106.7 155 49.7
Phvul.005G110200 Phaseolus vulgaris HOM05D014616 ORTHO05D010238 2.3e-20 103.6 246 36.2
TPR.G18053 Trifolium pratense HOM05D014616 ORTHO05D010238 3.9e-20 102.8 210 39.0
Glyma.13G303300 Glycine max HOM05D014616 ORTHO05D010238 3.6e-18 96.3 242 36.4
Lj3g0023312 Lotus japonicus HOM05D014616 ORTHO05D010238 6.2e-18 95.5 216 37.5
Lalb_Chr19g0135571 Lupinus albus HOM05D010583 ORTHO05D010238 1.2e-16 91.3 117 49.6
Prupe.3G227700 Prunus persica HOM05D008701 ORTHO05D010238 2.2e-15 87.0 220 37.3
arahy.Tifrunner.gnm1.ann1.G84J1P Arachis hypogaea HOM05D010583 ORTHO05D010238 2.9e-15 86.7 217 41.0
Glyma.12G198900 Glycine max HOM05D014616 ORTHO05D010238 1.4e-14 84.3 235 33.6
arahy.Tifrunner.gnm1.ann1.R7Z44W Arachis hypogaea HOM05D010583 ORTHO05D010238 1.9e-14 84.0 214 39.3
arahy.Tifrunner.gnm1.ann1.77HKPR Arachis hypogaea HOM05D010583 ORTHO05D010238 7.8e-13 78.6 205 38.0
arahy.Tifrunner.gnm1.ann1.YSN97R Arachis hypogaea HOM05D010583 ORTHO05D010238 7.8e-13 78.6 198 38.9
Psat5g267560 Pisum sativum HOM05D014616 ORTHO05D010238 3.9e-12 76.3 220 35.0
RcHm_v2.0_Chr2g0161211 Rosa chinensis HOM05D008701 ORTHO05D010238 1.1e-11 74.7 258 32.2
FvH4_6g44330 Fragaria vesca HOM05D008701 ORTHO05D010238 1.9e-11 73.9 249 29.7
FAN14G1396 Fragaria x ananassa HOM05D008701 ORTHO05D010238 1.9e-11 73.9 249 29.7
QL08p036307 Quercus lobata HOM05D008701 ORTHO05D010238 9.5e-11 71.6 250 31.6
MD17G1087000 Malus domestica HOM05D008701 ORTHO05D010238 1.6e-10 70.9 255 31.8
FAN05G0248 Fragaria x ananassa HOM05D008701 ORTHO05D010238 3.6e-10 69.7 244 29.5
COL.COLO4_06754 Corchorus olitorius HOM05D008701 ORTHO05D010238 1.1e-09 68.2 257 29.2
FAN09G1417 Fragaria x ananassa HOM05D008701 ORTHO05D010238 1.8e-09 67.4 247 29.6
FAN02G3791 Fragaria x ananassa HOM05D008701 ORTHO05D010238 2.0e-08 63.9 247 28.7
VMungo1080G0398 Vigna mungo HOM05D014616 ORTHO05D010238 7.6e-08 62.0 166 34.3
Phvul.005G110100 Phaseolus vulgaris HOM05D014616 ORTHO05D010238 9.9e-08 61.6 235 33.2
Gorai.002G016700 Gossypium raimondii HOM05D008701 ORTHO05D010238 1.7e-07 60.8 209 34.0
MD09G1098800 Malus domestica HOM05D008701 ORTHO05D010238 2.2e-07 60.5 259 31.3
Haze_13046 Corylus avellana HOM05D008701 ORTHO05D010238 3.7e-07 59.7 211 29.9
Potri.013G149300 Populus trichocarpa HOM05D008701 ORTHO05D010238 3.7e-07 59.7 283 29.3
Glyma.12G199000 Glycine max HOM05D014616 ORTHO05D010238 4.9e-07 59.3 255 29.4
Duzib052G1245 Durio zibethinus HOM05D008701 ORTHO05D010238 6.4e-07 58.9 241 29.5
Medtr0048s0140 Medicago truncatula HOM05D010583 ORTHO05D010238 1.9e-06 57.4 145 35.9
Thecc.02G167700 Theobroma cacao HOM05D008701 ORTHO05D010238 1.9e-06 57.4 232 29.3
Lalb_Chr19g0135561 Lupinus albus HOM05D010583 ORTHO05D010238 3.2e-06 56.6 93 40.9
Gohir.A01G013700 Gossypium hirsutum HOM05D008701 ORTHO05D010238 4.1e-06 56.2 207 30.4
Gohir.D01G015000 Gossypium hirsutum HOM05D008701 ORTHO05D010238 7.1e-06 55.5 215 31.2
Sabra13G0120500 Salix brachista HOM05D008701 ORTHO05D010238 7.1e-06 55.5 274 28.8
Cfa014502 Carpinus fangiana HOM05D008701 ORTHO05D010238 9.2e-06 55.1 210 32.9


User provided reference genes

Program Settings