Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G101601 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 1.4e-51 206.1 111 100.0
Phvul.008G153400 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 3.3e-48 194.9 110 94.5
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 3.3e-16 88.6 83 62.7
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 5.7e-16 87.8 82 62.2
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 4.1e-14 81.6 84 58.3
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 2.6e-13 79.0 85 58.8
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 7.6e-13 77.4 84 56.0
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 1.3e-12 76.6 84 56.0
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 1.7e-12 76.3 84 56.0
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 2.2e-12 75.9 90 53.3
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 8.5e-12 73.9 85 54.1
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 1.9e-11 72.8 116 44.8
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 2.5e-11 72.4 97 47.4
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 4.2e-11 71.6 97 47.4
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 7.2e-11 70.9 87 51.7
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 2.1e-10 69.3 87 50.6
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 2.7e-10 68.9 78 50.0
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 2.7e-10 68.9 85 49.4
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 6.1e-10 67.8 68 58.8
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 1.0e-09 67.0 99 44.4
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 1.0e-09 67.0 85 49.4
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 1.4e-09 66.6 99 44.4
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 1.4e-09 66.6 77 46.8
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 1.8e-09 66.2 110 41.8
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 1.8e-09 66.2 68 57.4
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 2.3e-09 65.9 71 54.9
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 3.0e-09 65.5 85 49.4
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 3.0e-09 65.5 85 48.2
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 3.0e-09 65.5 85 48.2
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 3.0e-09 65.5 88 50.0
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.0e-09 65.5 88 50.0
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.0e-09 65.5 88 50.0
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.0e-09 65.5 88 50.0
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.0e-09 65.5 88 50.0
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 3.9e-09 65.1 69 56.5
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 3.9e-09 65.1 85 49.4
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 3.9e-09 65.1 85 48.2
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 5.1e-09 64.7 85 48.2
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 5.1e-09 64.7 85 48.2
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 6.7e-09 64.3 85 48.2
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.7e-09 64.3 88 48.9
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 6.7e-09 64.3 74 52.7
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 6.7e-09 64.3 85 51.8
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 8.8e-09 63.9 85 47.1
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 8.8e-09 63.9 89 44.9
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 8.8e-09 63.9 89 44.9
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 8.8e-09 63.9 85 49.4
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 8.8e-09 63.9 104 44.2
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 8.8e-09 63.9 76 50.0
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 8.8e-09 63.9 100 48.0
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 1.5e-08 63.2 75 49.3
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 1.5e-08 63.2 85 50.6
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 1.9e-08 62.8 75 49.3
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 1.9e-08 62.8 68 54.4
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 1.9e-08 62.8 70 58.6
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.5e-08 62.4 78 55.1
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.5e-08 62.4 78 55.1
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 3.3e-08 62.0 101 41.6
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 3.3e-08 62.0 70 57.1
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.3e-08 62.0 72 55.6
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.3e-08 62.0 72 55.6
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 3.3e-08 62.0 80 48.8
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 3.3e-08 62.0 68 52.9
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 3.3e-08 62.0 85 45.9
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 4.3e-08 61.6 87 44.8
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 4.3e-08 61.6 87 44.8
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 4.3e-08 61.6 87 44.8
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 4.3e-08 61.6 74 55.4
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 5.7e-08 61.2 71 52.1
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 7.4e-08 60.8 84 45.2
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 7.4e-08 60.8 104 42.3
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 7.4e-08 60.8 86 47.7
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 7.4e-08 60.8 67 50.7
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 1.3e-07 60.1 68 52.9
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 1.7e-07 59.7 78 48.7
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 2.2e-07 59.3 69 50.7
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 2.2e-07 59.3 69 50.7
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 2.2e-07 59.3 90 45.6
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 2.2e-07 59.3 69 53.6
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 2.2e-07 59.3 97 44.3
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 2.2e-07 59.3 68 51.5
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 2.2e-07 59.3 70 57.1
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 2.8e-07 58.9 68 51.5
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 2.8e-07 58.9 71 52.1
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.8e-07 58.9 113 41.6
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 2.8e-07 58.9 84 46.4
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 2.8e-07 58.9 85 47.1
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 3.7e-07 58.5 71 52.1
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 3.7e-07 58.5 98 40.8
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 3.7e-07 58.5 107 37.4
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 3.7e-07 58.5 70 54.3
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 4.8e-07 58.2 69 53.6
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 4.8e-07 58.2 78 43.6
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 4.8e-07 58.2 113 40.7
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 6.3e-07 57.8 68 52.9
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 6.3e-07 57.8 86 44.2
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 8.2e-07 57.4 106 37.7
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 8.2e-07 57.4 105 37.1
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 8.2e-07 57.4 87 46.0
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 1.1e-06 57.0 71 49.3
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.1e-06 57.0 72 51.4
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 1.1e-06 57.0 73 46.6
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 1.1e-06 57.0 73 46.6
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 1.4e-06 56.6 107 37.4
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 1.4e-06 56.6 107 42.1
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 1.8e-06 56.2 70 47.1
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 1.8e-06 56.2 72 47.2
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 1.8e-06 56.2 73 45.2
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 2.4e-06 55.8 110 37.3
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 3.1e-06 55.5 86 45.3
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 3.1e-06 55.5 111 37.8
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 3.1e-06 55.5 105 37.1
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 4.1e-06 55.1 86 44.2
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 4.1e-06 55.1 71 47.9
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 4.1e-06 55.1 87 40.2
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 5.3e-06 54.7 107 36.4
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 5.3e-06 54.7 69 49.3
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 6.9e-06 54.3 81 44.4
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 9.1e-06 53.9 86 44.2
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 9.1e-06 53.9 105 36.2
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 9.1e-06 53.9 66 48.5


User provided reference genes

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