Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 3.9e-60 235.0 127 100.0
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 5.9e-56 221.1 127 92.9
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 1.4e-52 209.9 126 88.1
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 1.8e-49 199.5 126 84.9
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 3.1e-49 198.7 127 83.5
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 1.7e-47 193.0 124 79.0
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 3.8e-47 191.8 127 80.3
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 6.5e-47 191.0 124 79.0
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 1.1e-46 190.3 132 80.3
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 2.1e-45 186.0 133 76.7
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 2.7e-45 185.7 119 79.0
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 7.9e-45 184.1 125 79.2
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 1.9e-38 162.9 115 72.2
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 1.2e-37 160.2 122 69.7
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 2.7e-37 159.1 116 73.3
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 3.6e-37 158.7 124 68.5
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 3.6e-37 158.7 121 71.1
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 4.7e-37 158.3 127 66.9
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 6.1e-37 157.9 119 71.4
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 6.1e-37 157.9 127 65.4
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 1.4e-36 156.8 127 66.9
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 2.3e-36 156.0 110 73.6
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 3.0e-36 155.6 120 70.8
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 3.0e-36 155.6 124 68.5
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 8.8e-36 154.1 118 69.5
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 2.0e-35 152.9 124 69.4
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 4.4e-35 151.8 105 71.4
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 4.4e-35 151.8 118 68.6
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 9.7e-35 150.6 126 65.9
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 9.7e-35 150.6 126 65.9
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 9.7e-35 150.6 116 68.1
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 2.2e-34 149.4 137 61.3
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 2.8e-34 149.1 125 62.4
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 3.7e-34 148.7 123 65.9
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 3.7e-34 148.7 128 65.6
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 3.7e-34 148.7 123 65.9
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 3.7e-34 148.7 128 65.6
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 4.8e-34 148.3 117 71.8
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 6.3e-34 147.9 102 73.5
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 1.1e-33 147.1 110 71.8
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 1.8e-33 146.4 121 66.9
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 1.8e-33 146.4 127 65.4
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 2.4e-33 146.0 103 70.9
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 5.3e-33 144.8 103 69.9
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 7.0e-33 144.4 129 62.8
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 7.0e-33 144.4 119 64.7
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 9.1e-33 144.1 107 71.0
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 1.2e-32 143.7 119 65.5
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 2.7e-32 142.5 124 62.1
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.7e-32 142.5 110 69.1
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 3.5e-32 142.1 119 62.2
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 4.5e-32 141.7 130 63.1
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 5.9e-32 141.4 123 62.6
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 7.7e-32 141.0 97 71.1
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 1.0e-31 140.6 140 61.4
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 1.0e-31 140.6 120 61.7
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 1.0e-31 140.6 116 70.7
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 1.3e-31 140.2 100 68.0
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.7e-31 139.8 121 62.8
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 2.2e-31 139.4 107 68.2
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 2.2e-31 139.4 118 61.0
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 2.9e-31 139.0 99 68.7
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 2.9e-31 139.0 99 68.7
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 2.9e-31 139.0 99 68.7
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 3.8e-31 138.7 102 66.7
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 5.0e-31 138.3 118 65.3
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 6.5e-31 137.9 99 68.7
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 6.5e-31 137.9 122 59.0
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 6.5e-31 137.9 118 65.3
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 6.5e-31 137.9 117 65.8
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 6.5e-31 137.9 123 62.6
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 8.5e-31 137.5 139 55.4
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 8.5e-31 137.5 117 65.8
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 1.1e-30 137.1 127 63.8
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 2.5e-30 136.0 90 76.7
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 4.2e-30 135.2 116 65.5
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 5.5e-30 134.8 127 61.4
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 7.2e-30 134.4 100 71.0
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 7.2e-30 134.4 117 59.8
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 7.2e-30 134.4 134 55.2
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 1.6e-29 133.3 91 74.7
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 1.6e-29 133.3 125 59.2
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 1.6e-29 133.3 130 59.2
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 2.7e-29 132.5 122 60.7
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 4.7e-29 131.7 132 55.3
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 4.7e-29 131.7 99 69.7
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 4.7e-29 131.7 91 73.6
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 4.7e-29 131.7 124 58.1
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 1.0e-28 130.6 99 64.6
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 1.8e-28 129.8 92 71.7
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 1.8e-28 129.8 110 63.6
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 6.8e-28 127.9 127 55.1
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 8.8e-28 127.5 99 63.6
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 2.6e-27 125.9 125 57.6
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 2.6e-27 125.9 127 55.1
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 5.7e-27 124.8 96 70.8
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 1.7e-26 123.2 96 69.8
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 2.2e-26 122.9 88 67.0
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 8.3e-26 120.9 92 68.5
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 7.0e-25 117.9 86 66.3
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 1.2e-24 117.1 135 50.4
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 2.2e-23 112.8 132 50.8
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 5.0e-23 111.7 107 57.9
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 5.0e-23 111.7 111 55.0
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 8.5e-23 110.9 122 51.6
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 1.1e-22 110.5 105 54.3
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 2.5e-22 109.4 128 50.0
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 4.9e-18 95.1 109 47.7
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 2.0e-16 89.7 89 55.1
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 2.7e-16 89.4 122 44.3
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 5.6e-14 81.6 93 44.1
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.3e-10 70.5 53 66.0
COL.COLO4_19857 Corchorus olitorius HOM05D006639 ORTHO05D008339 1.7e-10 70.1 62 67.7
Nn1g05039 Nelumbo nucifera HOM05D006639 ORTHO05D008339 3.7e-10 68.9 52 65.4
Nn053s41924 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.1e-09 67.4 69 55.1
Nn1g05216 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.1e-09 67.4 69 55.1
Nn1g05215 Nelumbo nucifera HOM05D006639 ORTHO05D008339 2.4e-09 66.2 52 63.5
Lalb_Chr03g0028111 Lupinus albus HOM05D006639 ORTHO05D008339 1.1e-06 57.4 39 71.8
Lsat_1_v5_gn_6_29620 Lactuca sativa HOM05D000297 ORTHO05D000193 2.5e-06 56.2 89 30.3
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 3.3e-06 55.8 48 62.5


User provided reference genes

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