Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 3.3e-158 561.6 273 100.0
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 7.9e-120 434.1 271 79.3
Lj3g0008283 Lotus japonicus HOM05D007994 ORTHO05D010092 6.5e-90 334.7 285 64.2
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 7.2e-89 331.3 273 62.6
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 1.3e-69 267.3 293 51.5
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 3.1e-63 246.1 266 48.5
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 4.4e-62 242.3 257 48.6
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 1.1e-60 237.7 263 47.9
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 1.4e-60 237.3 262 48.1
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 1.9e-60 236.9 265 47.9
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 7.1e-60 235.0 279 47.7
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 2.1e-59 233.4 265 48.7
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 2.7e-59 233.0 267 46.8
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 7.3e-57 224.9 263 46.8
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 1.6e-56 223.8 266 46.2
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 3.1e-55 219.5 223 51.1
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 2.6e-54 216.5 279 45.2
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 2.2e-53 213.4 242 47.9
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 2.9e-53 213.0 273 44.0
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 1.4e-52 210.7 281 42.3
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 1.9e-52 210.3 272 43.8
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 2.4e-52 209.9 108 86.1
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 4.1e-52 209.1 276 45.3
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 1.0e-50 204.5 271 43.2
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 1.7e-50 203.8 266 45.9
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 7.3e-49 198.4 273 41.4
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 1.6e-48 197.2 265 41.9
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 1.4e-47 194.1 261 43.3
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 2.6e-46 189.9 259 40.5
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 2.6e-46 189.9 259 41.3
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 1.7e-45 187.2 265 40.4
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 5.6e-41 172.2 223 41.7
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 1.3e-40 171.0 256 39.8
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 9.0e-39 164.9 270 41.9
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 2.2e-37 160.2 273 41.4
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 7.1e-36 155.2 245 39.2
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 1.4e-31 141.0 265 35.1
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 2.4e-31 140.2 127 54.3
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 9.9e-30 134.8 268 32.1
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 2.4e-28 130.2 266 30.5
CSS0019289 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-24 115.9 132 50.0
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 5.3e-23 112.5 93 57.0
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 9.0e-23 111.7 253 30.4
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 1.3e-21 107.8 71 77.5
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 2.2e-21 107.1 123 43.1
FAN11G1628 Fragaria x ananassa HOM05D007994 ORTHO05D010092 9.3e-20 101.7 223 31.8
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 1.0e-18 98.2 113 37.2
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 6.7e-18 95.5 101 48.5
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 1.5e-17 94.4 263 28.5
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 5.7e-17 92.4 71 66.2
Psat7g190280 Pisum sativum HOM05D007994 ORTHO05D010092 5.3e-15 85.9 60 68.3
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 1.5e-14 84.3 110 47.3
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 2.6e-14 83.6 172 32.6
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 4.5e-14 82.8 93 45.2
BcaC01g02012 Brassica carinata HOM05D007994 ORTHO05D010092 1.0e-13 81.6 244 25.4
C03p69540 Brassica napus HOM05D007994 ORTHO05D010092 1.0e-13 81.6 244 25.4
BolC3t19209H Brassica oleracea HOM05D007994 ORTHO05D010092 1.0e-13 81.6 244 25.4
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 2.2e-13 80.5 244 25.0
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 2.2e-13 80.5 244 25.0
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 3.8e-13 79.7 78 52.6
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 6.5e-13 79.0 266 27.1
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 6.5e-13 79.0 254 27.6
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 1.4e-12 77.8 88 40.9
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 3.2e-12 76.6 111 44.1
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 6.1e-11 72.4 70 44.3
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 1.8e-10 70.9 51 51.0
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 1.1e-09 68.2 74 40.5
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 1.9e-09 67.4 74 40.5
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 5.7e-09 65.9 53 58.5
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 7.4e-09 65.5 47 51.1
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 9.7e-09 65.1 47 51.1
CARHR151480 Cardamine hirsuta HOM05D007994 ORTHO05D010092 1.3e-08 64.7 72 38.9
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 1.3e-08 64.7 72 40.3
Medtr4g053310 Medicago truncatula HOM05D007994 ORTHO05D010092 4.8e-08 62.8 37 67.6
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 1.5e-06 57.8 64 42.2
Rhsim12G0093900 Rhododendron simsii HOM05D007994 ORTHO05D010092 3.4e-06 56.6 79 38.0


User provided reference genes

Program Settings