Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 4.2e-37 157.5 80 100.0
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 3.3e-34 147.9 80 92.5
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 3.7e-33 144.4 79 89.9
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 2.2e-30 135.2 82 82.9
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 3.8e-30 134.4 82 82.9
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 8.5e-30 133.3 82 81.7
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 1.1e-29 132.9 82 82.9
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 1.4e-29 132.5 82 82.9
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 5.1e-27 124.0 82 78.0
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 2.8e-25 118.2 86 67.4
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 6.3e-25 117.1 91 69.2
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 6.3e-25 117.1 85 69.4
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 1.8e-24 115.5 77 79.2
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 1.2e-23 112.8 86 67.4
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.2e-23 112.8 80 67.5
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.0e-23 112.1 80 68.8
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.0e-23 112.1 80 68.8
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 2.6e-23 111.7 83 67.5
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 2.6e-23 111.7 86 65.1
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 2.6e-23 111.7 86 66.3
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 4.5e-23 110.9 86 66.3
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 5.9e-23 110.5 82 65.9
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 5.9e-23 110.5 86 64.0
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 1.3e-22 109.4 86 62.8
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 2.2e-22 108.6 86 62.8
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 2.2e-22 108.6 84 65.5
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 2.2e-22 108.6 84 65.5
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.9e-22 108.2 80 67.5
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 5.0e-22 107.5 86 64.0
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 5.0e-22 107.5 86 65.1
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 8.5e-22 106.7 80 63.8
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 1.9e-21 105.5 86 65.1
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.5e-21 105.1 86 65.1
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 3.2e-21 104.8 80 66.2
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 3.2e-21 104.8 86 64.0
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 4.2e-21 104.4 86 62.8
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 4.2e-21 104.4 86 60.5
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 5.5e-21 104.0 86 62.8
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 7.2e-21 103.6 86 62.8
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 7.2e-21 103.6 87 62.1
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 7.2e-21 103.6 86 62.8
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 7.2e-21 103.6 87 62.1
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 7.2e-21 103.6 87 62.1
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 7.2e-21 103.6 87 62.1
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 7.2e-21 103.6 87 62.1
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 9.4e-21 103.2 80 63.8
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 9.4e-21 103.2 86 62.8
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 1.2e-20 102.8 88 60.2
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 1.6e-20 102.4 80 66.2
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 2.1e-20 102.1 82 64.6
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 3.6e-20 101.3 86 61.6
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 4.7e-20 100.9 85 60.0
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 6.1e-20 100.5 78 65.4
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 1.0e-19 99.8 87 59.8
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 1.0e-19 99.8 86 64.0
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 1.4e-19 99.4 82 63.4
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 1.8e-19 99.0 79 64.6
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 2.3e-19 98.6 87 58.6
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 2.3e-19 98.6 83 67.5
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 3.0e-19 98.2 87 59.8
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 3.0e-19 98.2 82 64.6
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 5.1e-19 97.4 86 60.5
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 5.1e-19 97.4 86 61.6
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 8.8e-19 96.7 86 61.6
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 8.8e-19 96.7 86 61.6
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.1e-18 96.3 86 55.8
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 1.5e-18 95.9 86 60.5
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 2.0e-18 95.5 86 61.6
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 2.6e-18 95.1 85 61.2
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 3.3e-18 94.7 86 60.5
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 4.4e-18 94.4 87 59.8
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 5.7e-18 94.0 82 61.0
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 9.7e-18 93.2 84 58.3
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 9.7e-18 93.2 86 59.3
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 9.7e-18 93.2 86 59.3
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 9.7e-18 93.2 86 59.3
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 9.7e-18 93.2 86 54.7
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 9.7e-18 93.2 86 54.7
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 9.7e-18 93.2 83 57.8
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 1.3e-17 92.8 86 59.3
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 1.7e-17 92.4 86 58.1
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 2.2e-17 92.0 86 58.1
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.8e-17 91.7 85 52.9
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 3.7e-17 91.3 86 58.1
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 4.8e-17 90.9 83 56.6
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 6.3e-17 90.5 87 56.3
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 6.3e-17 90.5 86 58.1
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 8.2e-17 90.1 83 59.0
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 1.1e-16 89.7 86 55.8
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 1.1e-16 89.7 80 58.8
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 1.8e-16 89.0 85 55.3
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 1.8e-16 89.0 87 58.6
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 3.1e-16 88.2 79 55.7
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 9.1e-16 86.7 82 56.1
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 4.5e-15 84.3 74 60.8
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 1.0e-14 83.2 75 60.0
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 1.7e-14 82.4 82 53.7
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 4.2e-13 77.8 174 31.6
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 5.5e-13 77.4 84 52.4
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 1.6e-12 75.9 80 50.0
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 1.4e-11 72.8 84 50.0
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 4.0e-11 71.2 66 53.0
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 1.1e-10 69.7 89 48.3
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 7.5e-10 67.0 92 40.2
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 6.3e-09 63.9 84 44.0
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 2.4e-08 62.0 92 40.2
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 1.2e-07 59.7 43 67.4
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 2.7e-07 58.5 41 73.2
arahy.Tifrunner.gnm1.ann1.RL700P Arachis hypogaea HOM05D006503 ORTHO05D008116 4.5e-07 57.8 41 75.6
Haze_23826 Corylus avellana HOM05D025838 ORTHO05D008282 7.7e-07 57.0 34 70.6
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 1.0e-06 56.6 43 60.5
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 2.2e-06 55.5 41 68.3
Ah.01g002900 Amaranthus hybridus HOM05D006634 ORTHO05D008282 3.8e-06 54.7 51 49.0
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 6.5e-06 53.9 46 56.5


User provided reference genes

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