Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G077500 Phaseolus vulgaris HOM05D007207 ORTHO05D009041 1.5e-87 326.2 171 100.0
VMungo1127G1112 Vigna mungo HOM05D007207 ORTHO05D009041 4.4e-76 288.1 174 88.5
Glyma.12G069100 Glycine max HOM05D007207 ORTHO05D009041 7.1e-42 174.5 184 59.2
Medtr4g059710 Medicago truncatula HOM05D007207 ORTHO05D009041 3.4e-36 155.6 100 73.0
Psat7g224520 Pisum sativum HOM05D007207 ORTHO05D009041 4.4e-36 155.2 121 66.1
Lj3g0024872 Lotus japonicus HOM05D007207 ORTHO05D009041 1.3e-35 153.7 102 72.5
Ca_05249_v3 Cicer arietinum L. HOM05D007207 ORTHO05D009041 6.4e-35 151.4 100 72.0
Glyma.11G148000 Glycine max HOM05D007207 ORTHO05D009041 2.4e-34 149.4 123 67.5
TPR.G17530 Trifolium pratense HOM05D007207 ORTHO05D009041 1.0e-32 144.1 130 60.0
arahy.Tifrunner.gnm1.ann1.F7CTDZ Arachis hypogaea HOM05D007207 ORTHO05D009041 5.1e-32 141.7 121 62.0
arahy.Tifrunner.gnm1.ann1.KZS5BJ Arachis hypogaea HOM05D007207 ORTHO05D009041 6.6e-32 141.4 92 70.7
CiPaw.13G111000 Carya illinoinensis HOM05D007207 ORTHO05D009041 8.7e-32 141.0 99 65.7
Lalb_Chr01g0004241 Lupinus albus HOM05D007207 ORTHO05D009041 1.3e-30 137.1 156 51.9
QL01p022653 Quercus lobata HOM05D007207 ORTHO05D009041 5.3e-29 131.7 99 58.6
CANSAT54G0517 Cannabis sativa HOM05D007207 ORTHO05D009041 1.2e-28 130.6 93 63.4
QL01p022696 Quercus lobata HOM05D007207 ORTHO05D009041 3.4e-28 129.0 99 57.6
MD03G1114400 Malus domestica HOM05D007207 ORTHO05D009041 4.5e-28 128.6 152 45.4
RcHm_v2.0_Chr5g0059711 Rosa chinensis HOM05D007207 ORTHO05D009041 9.9e-28 127.5 116 51.7
Sed0024734 Sechium edule HOM05D007207 ORTHO05D009041 1.3e-27 127.1 144 49.3
Duzib170G0585 Durio zibethinus HOM05D007207 ORTHO05D009041 2.2e-27 126.3 94 61.7
PSO339G6489 Papaver somniferum HOM05D007207 ORTHO05D009041 2.9e-27 125.9 92 65.2
FAN21G0351 Fragaria x ananassa HOM05D007207 ORTHO05D009041 8.4e-27 124.4 124 46.8
Nn2g13070 Nelumbo nucifera HOM05D007207 ORTHO05D009041 1.1e-26 124.0 92 63.0
Duzib168G2405 Durio zibethinus HOM05D007207 ORTHO05D009041 2.4e-26 122.9 95 61.1
FAN11G2184 Fragaria x ananassa HOM05D007207 ORTHO05D009041 2.4e-26 122.9 131 48.9
TAR633G1504 Trochodendron aralioides HOM05D000656 ORTHO05D000871 2.4e-26 122.9 93 60.2
FvH4_3g32640 Fragaria vesca HOM05D007207 ORTHO05D009041 3.2e-26 122.5 134 47.8
PSO063G2032 Papaver somniferum HOM05D007207 ORTHO05D009041 4.2e-26 122.1 92 63.0
FAN25G0070 Fragaria x ananassa HOM05D007207 ORTHO05D009041 2.1e-25 119.8 155 43.9
Thecc.09G257600 Theobroma cacao HOM05D007207 ORTHO05D009041 2.1e-25 119.8 95 57.9
Ciclev10030232m.g Citrus clementina HOM05D007207 ORTHO05D009041 2.7e-25 119.4 92 57.6
Hma1.2p1_1030F.1_g249850 Hydrangea macrophylla HOM05D007207 ORTHO05D009041 2.7e-25 119.4 107 55.1
Gohir.A07G117400 Gossypium hirsutum HOM05D007207 ORTHO05D009041 4.6e-25 118.6 95 57.9
PGR102G0648 Punica granatum HOM05D007207 ORTHO05D009041 1.3e-24 117.1 96 54.2
Gohir.D07G121800 Gossypium hirsutum HOM05D007207 ORTHO05D009041 1.8e-24 116.7 95 57.9
Gorai.001G131300 Gossypium raimondii HOM05D007207 ORTHO05D009041 1.8e-24 116.7 95 57.9
GSVIVG01025169001 Vitis vinifera HOM05D007207 ORTHO05D009041 1.8e-24 116.7 91 59.3
Potri.009G012300 Populus trichocarpa HOM05D007207 ORTHO05D009041 3.9e-24 115.5 132 47.0
Manes.04G022800 Manihot esculenta HOM05D007207 ORTHO05D009041 5.1e-24 115.2 94 54.3
Lsat_1_v5_gn_1_65500 Lactuca sativa HOM05D007207 ORTHO05D009041 6.7e-24 114.8 90 61.1
TWI79G0777 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 1.5e-23 113.6 178 41.0
TAR636G0495 Trochodendron aralioides HOM05D007207 ORTHO05D009041 1.5e-23 113.6 93 62.4
MSTRG.17815 Avicennia marina HOM05D007207 ORTHO05D009041 1.9e-23 113.2 86 58.1
ECA248G1375 Erigeron canadensis HOM05D000214 ORTHO05D000131 1.9e-23 113.2 91 58.2
Hund08142 Selenicereus undatus HOM05D007207 ORTHO05D009041 9.6e-23 110.9 108 53.7
Sc06g0010040 Simmondsia chinensis HOM05D007207 ORTHO05D009041 9.6e-23 110.9 99 56.6
Dinv32761 Davidia involucrata HOM05D007207 ORTHO05D009041 1.6e-22 110.2 88 60.2
Peaxi162Scf00686g00043 Petunia axillaris HOM05D007207 ORTHO05D009041 1.6e-22 110.2 92 56.5
HanXRQChr01g0018341 Helianthus annuus HOM05D007207 ORTHO05D009041 3.7e-22 109.0 123 47.2
Ah.01g015070 Amaranthus hybridus HOM05D007207 ORTHO05D009041 8.1e-22 107.8 128 49.2
MELO3C025765.2 Cucumis melo HOM05D007207 ORTHO05D009041 1.1e-21 107.5 145 40.7
EL10Ac9g22498 Beta vulgaris HOM05D007207 ORTHO05D009041 1.4e-21 107.1 113 51.3
THA.LOC104815749 Tarenaya hassleriana HOM05D007207 ORTHO05D009041 2.4e-21 106.3 149 41.6
TWI75G1762 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 2.4e-21 106.3 100 51.0
Actinidia20448 Actinidia chinensis HOM05D007207 ORTHO05D009041 3.1e-21 105.9 88 59.1
Cc01_g11290 Coffea canephora HOM05D007207 ORTHO05D009041 1.2e-20 104.0 88 54.5
Sopen06g007140 Solanum pennellii HOM05D007207 ORTHO05D009041 1.5e-20 103.6 88 52.3
MBI11_g23474_MAGBIO Magnolia biondii HOM05D007207 ORTHO05D009041 2.0e-20 103.2 92 50.0
Solyc06g016750.3 Solanum lycopersicum HOM05D007207 ORTHO05D009041 2.0e-20 103.2 88 52.3
AUR62039621 Chenopodium quinoa HOM05D007207 ORTHO05D009041 3.4e-20 102.4 142 45.8
BcaC07g42510 Brassica carinata HOM05D007207 ORTHO05D009041 4.5e-20 102.1 98 49.0
A06p05070 Brassica napus HOM05D007207 ORTHO05D009041 1.3e-19 100.5 168 39.3
BraA06t23713Z Brassica rapa HOM05D007207 ORTHO05D009041 1.3e-19 100.5 168 39.3
BraA09t41946Z Brassica rapa HOM05D007207 ORTHO05D009041 6.5e-19 98.2 163 41.1
Carub.0001s0733 Capsella rubella HOM05D007207 ORTHO05D009041 8.4e-19 97.8 154 41.6
CARHR007760 Cardamine hirsuta HOM05D007207 ORTHO05D009041 8.4e-19 97.8 134 43.3
Thhalv10008787m.g Eutrema salsugineum HOM05D007207 ORTHO05D009041 1.1e-18 97.4 154 39.6
ClCG02G021080 Citrullus lanatus HOM05D007207 ORTHO05D009041 1.9e-18 96.7 157 35.7
SalBow3G2981 Salvia bowleyana HOM05D007207 ORTHO05D009041 3.2e-18 95.9 134 41.0
HPP92_012669 Vanilla planifolia HOM05D007207 ORTHO05D009041 3.2e-18 95.9 96 47.9
BcaB02g06697 Brassica carinata HOM05D007207 ORTHO05D009041 7.1e-18 94.7 165 38.2
BcaC05g24714 Brassica carinata HOM05D007207 ORTHO05D009041 7.1e-18 94.7 169 39.1
Rhsim01G0217900 Rhododendron simsii HOM05D007207 ORTHO05D009041 9.3e-18 94.4 136 39.0
Sp1g06610 Schrenkiella parvula HOM05D007207 ORTHO05D009041 9.3e-18 94.4 156 38.5
AL1G18310 Arabidopsis lyrata HOM05D007207 ORTHO05D009041 1.2e-17 94.0 134 41.0
A09p66080 Brassica napus HOM05D007207 ORTHO05D009041 2.1e-17 93.2 160 38.1
C08p50230 Brassica napus HOM05D007207 ORTHO05D009041 2.1e-17 93.2 156 37.8
BolC8t52552H Brassica oleracea HOM05D007207 ORTHO05D009041 2.1e-17 93.2 156 37.8
Atru.chr3.3663 Acer truncatum HOM05D007207 ORTHO05D009041 3.5e-17 92.4 118 43.2
C05p06030 Brassica napus HOM05D007207 ORTHO05D009041 6.0e-17 91.7 169 37.9
CAN.G934.2 Capsicum annuum HOM05D007207 ORTHO05D009041 1.3e-16 90.5 167 39.5
Aa31LG2G9300 Aethionema arabicum HOM05D007207 ORTHO05D009041 1.8e-16 90.1 148 37.8
AT1G07980 Arabidopsis thaliana HOM05D007207 ORTHO05D009041 1.8e-16 90.1 156 37.8
SGA_v2.0_scaffold80G25756 Striga asiatica HOM05D007207 ORTHO05D009041 1.1e-15 87.4 128 39.1
BolC5t29362H Brassica oleracea HOM05D007207 ORTHO05D009041 3.3e-15 85.9 169 36.7
SEGI_13018 Sequoiadendron giganteum HOM05D007207 ORTHO05D009041 3.3e-15 85.9 135 40.0
Prupe.6G099600 Prunus persica HOM05D007207 ORTHO05D009041 2.8e-14 82.8 65 50.8
Sabra09G0008800 Salix brachista HOM05D007207 ORTHO05D009041 4.8e-14 82.0 187 32.6
vmacro14446 Vaccinium macrocarpon HOM05D007207 ORTHO05D009041 6.2e-14 81.6 83 49.4
CDE07G0349 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 1.8e-13 80.1 122 38.5
CDE06G2547 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 2.4e-13 79.7 153 37.3
Os03g0852300 Oryza sativa ssp. japonica HOM05D007207 ORTHO05D009041 5.3e-13 78.6 134 36.6
CsaV3_6G021790 Cucumis sativus L. HOM05D007207 ORTHO05D009041 1.2e-12 77.4 98 41.8
Oeu027462.1 Olea europaea HOM05D007207 ORTHO05D009041 7.6e-12 74.7 82 45.1
Duzib170G0223 Durio zibethinus HOM05D007207 ORTHO05D009041 1.7e-11 73.6 171 36.8
AUR62024995 Chenopodium quinoa HOM05D007207 ORTHO05D009041 2.2e-11 73.2 61 57.4
AagrBONN_evm.TU.Sc2ySwM_228.2356 Anthoceros agrestis HOM05D007207 ORTHO05D009041 3.8e-11 72.4 86 40.7
Actinidia03739 Actinidia chinensis HOM05D007207 ORTHO05D009041 5.0e-11 72.0 119 37.8
Migut.N02608 Erythranthe guttata HOM05D007207 ORTHO05D009041 3.2e-10 69.3 71 47.9
unitig_699.g19196 Utricularia gibba HOM05D007207 ORTHO05D009041 4.2e-10 68.9 163 34.4
Mapoly0168s0007 Marchantia polymorpha HOM05D007207 ORTHO05D009041 7.1e-10 68.2 101 37.6
CBR_g30333 Chara braunii HOM05D000789 ORTHO05D000897 9.3e-10 67.8 79 43.0
SHI06088 Sapria himalayana HOM05D007207 ORTHO05D009041 2.7e-09 66.2 144 37.5
Pp3c17_12030 Physcomitrium patens HOM05D007207 ORTHO05D009041 4.6e-09 65.5 99 36.4
PGSC0003DMG401030137 Solanum tuberosum HOM05D038777 ORTHO05D009041 1.0e-08 64.3 59 47.5
Aa31LG8G12190 Aethionema arabicum HOM05D007207 ORTHO05D009041 6.7e-08 61.6 64 39.1
AL8G24720 Arabidopsis lyrata HOM05D000789 ORTHO05D038648 4.3e-07 58.9 87 32.2
Phvul.006G152300 Phaseolus vulgaris HOM05D000789 ORTHO05D000897 7.4e-07 58.2 85 34.1
VMungo0540G0387 Vigna mungo HOM05D000789 ORTHO05D000897 2.8e-06 56.2 83 33.7


User provided reference genes

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