Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G075700 Phaseolus vulgaris HOM05D007807 ORTHO05D000006 3.5e-58 228.0 112 100.0
Lj6g0001957 Lotus japonicus HOM05D002777 ORTHO05D000006 3.3e-16 88.6 109 43.1
Phvul.010G087401 Phaseolus vulgaris HOM05D000003 ORTHO05D000006 4.4e-16 88.2 110 42.7
Lalb_Chr15g0080611 Lupinus albus HOM05D000003 ORTHO05D000006 1.7e-15 86.3 107 37.4
Medtr6g024380 Medicago truncatula HOM05D000003 ORTHO05D000004 2.4e-14 82.4 108 38.0
Glyma.10G082200 Glycine max HOM05D002777 ORTHO05D000006 3.1e-14 82.0 110 34.5
Lj4g0005812 Lotus japonicus HOM05D007807 ORTHO05D000006 4.1e-14 81.6 109 34.9
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 2.7e-13 79.0 106 38.7
Medtr5g021380 Medicago truncatula HOM05D000003 ORTHO05D000006 1.7e-12 76.3 105 35.2
Psat4g004920 Pisum sativum HOM05D007807 ORTHO05D001516 5.0e-12 74.7 112 34.8
Medtr1g040450 Medicago truncatula HOM05D000003 ORTHO05D000006 8.5e-12 73.9 103 39.8
Psat4g086880 Pisum sativum HOM05D000003 ORTHO05D000006 2.5e-11 72.4 107 38.3
Psat2g122120 Pisum sativum HOM05D007807 ORTHO05D001516 4.2e-11 71.6 111 34.2
Psat0s3204g0040 Pisum sativum HOM05D007807 ORTHO05D000006 5.5e-11 71.2 111 35.1
Psat1g199520 Pisum sativum HOM05D007807 ORTHO05D001516 7.2e-11 70.9 111 34.2
Medtr2g105880 Medicago truncatula HOM05D000003 ORTHO05D000006 1.2e-10 70.1 105 32.4
Medtr3g022950 Medicago truncatula HOM05D008558 ORTHO05D011658 1.2e-10 70.1 101 36.6
Medtr6g048840 Medicago truncatula HOM05D000003 ORTHO05D000006 1.2e-10 70.1 108 38.9
Psat3g104680 Pisum sativum HOM05D007807 ORTHO05D001516 2.1e-10 69.3 112 33.9
Medtr3g448380 Medicago truncatula HOM05D000003 ORTHO05D000006 2.7e-10 68.9 103 35.0
Psat7g033120 Pisum sativum HOM05D007807 ORTHO05D001516 2.7e-10 68.9 111 34.2
Phvul.006G018400 Phaseolus vulgaris HOM05D036797 ORTHO05D036533 3.6e-10 68.6 50 52.0
Psat3g174320 Pisum sativum HOM05D007807 ORTHO05D001516 4.7e-10 68.2 111 33.3
Psat4g225800 Pisum sativum HOM05D007807 ORTHO05D001516 4.7e-10 68.2 111 34.2
Psat6g225440 Pisum sativum HOM05D000003 ORTHO05D000006 4.7e-10 68.2 111 34.2
Psat3g133760 Pisum sativum HOM05D000003 ORTHO05D000004 8.0e-10 67.4 111 34.2
Thecc.09G223500 Theobroma cacao HOM05D009258 ORTHO05D000006 8.0e-10 67.4 108 36.1
Psat0s1204g0040 Pisum sativum HOM05D007807 ORTHO05D001516 1.4e-09 66.6 108 35.2
Psat0s3434g0160 Pisum sativum HOM05D007807 ORTHO05D001516 1.8e-09 66.2 111 33.3
Psat3g173240 Pisum sativum HOM05D000003 ORTHO05D000004 1.8e-09 66.2 111 32.4
Medtr1g036570 Medicago truncatula HOM05D039479 ORTHO05D000006 2.3e-09 65.9 104 35.6
Medtr7g083690 Medicago truncatula HOM05D000003 ORTHO05D000004 2.3e-09 65.9 105 32.4
Psat2g036200 Pisum sativum HOM05D007807 ORTHO05D001516 2.3e-09 65.9 111 33.3
Medtr0032s0090 Medicago truncatula HOM05D000003 ORTHO05D000006 4.0e-09 65.1 105 29.5
Gohir.A04G039600 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.5e-08 63.2 103 35.9
PSO339G2808 Papaver somniferum HOM05D000003 ORTHO05D000006 1.5e-08 63.2 85 40.0
ECA246G3612 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.0e-08 62.8 90 38.9
TPR.G35686 Trifolium pratense HOM05D000003 ORTHO05D000006 2.0e-08 62.8 72 41.7
Medtr6g033705 Medicago truncatula HOM05D008332 ORTHO05D000006 2.6e-08 62.4 66 39.4
Medtr1g062670 Medicago truncatula HOM05D000003 ORTHO05D000006 3.4e-08 62.0 105 29.5
Atru.chr1.2519 Acer truncatum HOM05D000003 ORTHO05D002259 4.4e-08 61.6 101 35.6
Actinidia24025 Actinidia chinensis HOM05D000003 ORTHO05D000004 7.5e-08 60.8 106 37.7
Medtr0062s0050 Medicago truncatula HOM05D000003 ORTHO05D000006 7.5e-08 60.8 103 30.1
Medtr0062s0080 Medicago truncatula HOM05D000003 ORTHO05D000006 7.5e-08 60.8 103 30.1
Medtr0938s0010 Medicago truncatula HOM05D000003 ORTHO05D000006 7.5e-08 60.8 103 30.1
Medtr6g016175 Medicago truncatula HOM05D000003 ORTHO05D000006 7.5e-08 60.8 108 35.2
Medtr7g108760 Medicago truncatula HOM05D008558 ORTHO05D000006 7.5e-08 60.8 105 28.6
Medtr8g012780 Medicago truncatula HOM05D000003 ORTHO05D000006 7.5e-08 60.8 84 32.1
Medtr8g058470 Medicago truncatula HOM05D008558 ORTHO05D000006 7.5e-08 60.8 105 28.6
TPR.G18505 Trifolium pratense HOM05D000003 ORTHO05D000004 7.5e-08 60.8 86 36.0
ECA232G3889 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.8e-08 60.5 106 34.9
Medtr7g104745 Medicago truncatula HOM05D000003 ORTHO05D001516 9.8e-08 60.5 91 34.1
Medtr1g018785 Medicago truncatula HOM05D000003 ORTHO05D000006 1.3e-07 60.1 106 31.1
Gohir.A10G154650 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.2e-07 59.3 91 36.3
PSO675G4427 Papaver somniferum HOM05D000003 ORTHO05D000006 2.2e-07 59.3 109 33.9
CSS0005709 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.7e-07 58.5 108 31.5
Medtr2g035690 Medicago truncatula HOM05D000003 ORTHO05D000006 3.7e-07 58.5 104 28.8
Medtr2g067570 Medicago truncatula HOM05D000003 ORTHO05D000006 3.7e-07 58.5 77 37.7
Medtr4g054200 Medicago truncatula HOM05D008558 ORTHO05D000006 3.7e-07 58.5 69 43.5
Medtr7g057470 Medicago truncatula HOM05D000003 ORTHO05D000006 3.7e-07 58.5 87 32.2
Medtr7g057490 Medicago truncatula HOM05D000003 ORTHO05D000006 3.7e-07 58.5 87 32.2
ECA240G2917 Erigeron canadensis HOM05D000003 ORTHO05D000006 4.8e-07 58.2 93 38.7
Medtr1g041135 Medicago truncatula HOM05D000003 ORTHO05D000004 4.8e-07 58.2 51 37.3
PSO782G3067 Papaver somniferum HOM05D000003 ORTHO05D000004 4.8e-07 58.2 86 39.5
ECA234G2109 Erigeron canadensis HOM05D000003 ORTHO05D000006 8.3e-07 57.4 105 32.4
Medtr5g095550 Medicago truncatula HOM05D000003 ORTHO05D000006 1.1e-06 57.0 69 36.2
Psat1g119760 Pisum sativum HOM05D007807 ORTHO05D001516 1.4e-06 56.6 68 38.2
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.8e-06 56.2 103 34.0
Medtr3g026390 Medicago truncatula HOM05D000003 ORTHO05D000006 1.8e-06 56.2 79 38.0
Psat4g166440 Pisum sativum HOM05D007807 ORTHO05D000006 1.8e-06 56.2 88 34.1
CSS0017637 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.4e-06 55.8 102 34.3
CSS0042274 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.4e-06 55.8 102 34.3
Medtr0406s0020 Medicago truncatula HOM05D000003 ORTHO05D000006 2.4e-06 55.8 63 38.1
PSO675G0500 Papaver somniferum HOM05D000003 ORTHO05D000006 2.4e-06 55.8 85 36.5
ECA233G5627 Erigeron canadensis HOM05D000003 ORTHO05D000006 3.1e-06 55.5 69 37.7
ECA248G1501 Erigeron canadensis HOM05D000003 ORTHO05D000006 3.1e-06 55.5 97 33.0
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.1e-06 55.1 104 32.7
HanXRQChr13g0401811 Helianthus annuus HOM05D000003 ORTHO05D000004 4.1e-06 55.1 106 30.2
ECA238G0304 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.4e-06 54.7 105 35.2
HanXRQChr12g0376001 Helianthus annuus HOM05D000003 ORTHO05D000004 5.4e-06 54.7 102 33.3
QL04p076801 Quercus lobata HOM05D005437 ORTHO05D006699 5.4e-06 54.7 89 36.0
QL08p037175 Quercus lobata HOM05D005699 ORTHO05D007496 5.4e-06 54.7 78 39.7
QL08p037250 Quercus lobata HOM05D005699 ORTHO05D007496 5.4e-06 54.7 78 39.7
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-06 54.3 104 30.8
CiPaw.01G048000 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.0e-06 54.3 72 36.1
ECA233G1491 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.0e-06 54.3 97 30.9
Psat7g259920 Pisum sativum HOM05D007807 ORTHO05D000006 7.0e-06 54.3 67 37.3
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 7.0e-06 54.3 85 29.4
CSS0040117 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.1e-06 53.9 106 30.2
Medtr0426s0010 Medicago truncatula HOM05D000003 ORTHO05D000006 9.1e-06 53.9 71 36.6
PSO302G0095 Papaver somniferum HOM05D000003 ORTHO05D000006 9.1e-06 53.9 90 35.6
QL03p009188 Quercus lobata HOM05D000003 ORTHO05D000006 9.1e-06 53.9 85 32.9


User provided reference genes

Program Settings