Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G067000 Phaseolus vulgaris HOM05D000293 ORTHO05D000180 4.7e-75 284.6 167 100.0
VMungo1127G1747 Vigna mungo HOM05D000293 ORTHO05D000180 4.6e-46 188.3 137 71.5
Glyma.11G142900 Glycine max HOM05D000293 ORTHO05D000180 5.7e-44 181.4 138 70.3
Glyma.12G066000 Glycine max HOM05D000293 ORTHO05D000180 1.1e-39 167.2 140 69.3
Glyma.13G333200 Glycine max HOM05D000293 ORTHO05D000180 1.1e-31 140.6 135 56.3
Glyma.15G041100 Glycine max HOM05D000293 ORTHO05D000180 1.9e-31 139.8 135 60.0
Lj3g0005418 Lotus japonicus HOM05D000293 ORTHO05D000180 2.0e-28 129.8 137 57.7
TPR.G1036 Trifolium pratense HOM05D000293 ORTHO05D000180 2.0e-25 119.8 133 52.6
Medtr4g063100 Medicago truncatula HOM05D000293 ORTHO05D000180 3.6e-22 109.0 133 49.6
Psat7g219640 Pisum sativum HOM05D000293 ORTHO05D000180 2.0e-20 103.2 97 56.7
PGR102G0406 Punica granatum HOM05D000293 ORTHO05D000180 2.0e-20 103.2 120 50.8
Lalb_Chr03g0026861 Lupinus albus HOM05D000293 ORTHO05D000180 3.3e-20 102.4 136 48.5
arahy.Tifrunner.gnm1.ann1.96C52J Arachis hypogaea HOM05D000293 ORTHO05D000180 9.7e-20 100.9 131 51.1
arahy.Tifrunner.gnm1.ann1.EJIH9F Arachis hypogaea HOM05D000293 ORTHO05D000180 9.7e-20 100.9 131 51.1
Ca_19191_v3 Cicer arietinum L. HOM05D000293 ORTHO05D000180 1.7e-19 100.1 133 48.9
PGR119G1994 Punica granatum HOM05D000293 ORTHO05D000180 2.4e-18 96.3 128 45.3
Eucgr.B02401 Eucalyptus grandis HOM05D000293 ORTHO05D000180 5.3e-18 95.1 130 47.7
TWI79G0056 Tripterygium wilfordii HOM05D000293 ORTHO05D000180 5.3e-18 95.1 124 48.4
Lj3g0012398 Lotus japonicus HOM05D000293 ORTHO05D000180 7.0e-18 94.7 127 49.6
Ca_01345_v3 Cicer arietinum L. HOM05D000293 ORTHO05D000180 5.9e-17 91.7 121 46.3
Ca_28028_v3 Cicer arietinum L. HOM05D000293 ORTHO05D000180 5.9e-17 91.7 121 46.3
GSVIVG01025034001 Vitis vinifera HOM05D000293 ORTHO05D000180 5.9e-17 91.7 99 51.5
CiPaw.13G099500 Carya illinoinensis HOM05D000293 ORTHO05D000180 1.3e-16 90.5 130 44.6
Prupe.6G085000 Prunus persica HOM05D000293 ORTHO05D000180 1.7e-16 90.1 127 44.9
Lalb_Chr24g0394251 Lupinus albus HOM05D000293 ORTHO05D000180 2.9e-16 89.4 132 47.0
Manes.11G134300 Manihot esculenta HOM05D000293 ORTHO05D000180 5.0e-16 88.6 124 50.8
Dinv06136 Davidia involucrata HOM05D000293 ORTHO05D000180 8.5e-16 87.8 115 47.0
Dinv30677 Davidia involucrata HOM05D000293 ORTHO05D000180 1.1e-15 87.4 116 46.6
Dinv34337 Davidia involucrata HOM05D000293 ORTHO05D000180 1.1e-15 87.4 116 46.6
Haze_24030 Corylus avellana HOM05D000293 ORTHO05D000180 1.5e-15 87.0 129 49.6
Medtr2g096380 Medicago truncatula HOM05D000293 ORTHO05D000180 5.5e-15 85.1 125 43.2
Phvul.L002743 Phaseolus vulgaris HOM05D000293 ORTHO05D000180 5.5e-15 85.1 118 44.9
Sabra09G0018500 Salix brachista HOM05D000293 ORTHO05D000180 5.5e-15 85.1 120 47.5
Sabra16G0141700 Salix brachista HOM05D000293 ORTHO05D000180 5.5e-15 85.1 122 43.4
Cpa.g.sc190.35 Carica papaya HOM05D000293 ORTHO05D000180 9.4e-15 84.3 123 47.2
Potri.009G027300 Populus trichocarpa HOM05D000293 ORTHO05D000180 9.4e-15 84.3 121 46.3
Duzib150G0205 Durio zibethinus HOM05D000293 ORTHO05D000180 1.2e-14 84.0 129 49.6
Duzib168G1819 Durio zibethinus HOM05D000293 ORTHO05D000180 1.2e-14 84.0 129 49.6
Potri.001G235500 Populus trichocarpa HOM05D000293 ORTHO05D000180 2.7e-14 82.8 122 45.1
TWI31G0727 Tripterygium wilfordii HOM05D000293 ORTHO05D000180 3.6e-14 82.4 132 43.9
Gohir.D07G100001 Gossypium hirsutum HOM05D000293 ORTHO05D000180 4.7e-14 82.0 131 43.5
Gohir.A07G095700 Gossypium hirsutum HOM05D000293 ORTHO05D000180 6.1e-14 81.6 131 42.7
Duzib170G1070 Durio zibethinus HOM05D000293 ORTHO05D000180 8.0e-14 81.3 129 46.5
Gorai.001G107900 Gossypium raimondii HOM05D000293 ORTHO05D000180 8.0e-14 81.3 117 44.4
Thecc.09G327800 Theobroma cacao HOM05D000293 ORTHO05D000180 1.0e-13 80.9 95 52.6
TPR.G34308 Trifolium pratense HOM05D000293 ORTHO05D000180 1.8e-13 80.1 128 40.6
CSS0029851 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D000180 1.2e-12 77.4 135 40.0
Lj1A159T38 Lonicera japonica HOM05D000293 ORTHO05D000180 2.0e-12 76.6 108 47.2
Hma1.2p1_0624F.1_g191200 Hydrangea macrophylla HOM05D000293 ORTHO05D000180 2.6e-12 76.3 131 39.7
Hma1.2p1_0846F.1_g227605 Hydrangea macrophylla HOM05D000293 ORTHO05D000180 2.6e-12 76.3 131 39.7
MD03G1099900 Malus domestica HOM05D000293 ORTHO05D000180 3.3e-12 75.9 105 47.6
CSS0046107 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D000180 5.7e-12 75.1 94 41.5
CSS0006439 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D000180 7.5e-12 74.7 135 39.3
Manes.04G030450 Manihot esculenta HOM05D000293 ORTHO05D000180 7.5e-12 74.7 124 46.8
VMungo1080G0921 Vigna mungo HOM05D000293 ORTHO05D000180 9.7e-12 74.3 118 43.2
Gohir.D03G129700 Gossypium hirsutum HOM05D000293 ORTHO05D000180 2.8e-11 72.8 130 42.3
Gorai.003G136400 Gossypium raimondii HOM05D000293 ORTHO05D000180 2.8e-11 72.8 130 42.3
QL01p033399 Quercus lobata HOM05D000293 ORTHO05D000180 2.8e-11 72.8 129 40.3
Gohir.A03G038700 Gossypium hirsutum HOM05D000293 ORTHO05D000180 4.8e-11 72.0 129 42.6
MD11G1114100 Malus domestica HOM05D000293 ORTHO05D000180 8.2e-11 71.2 102 45.1
Ciclev10029019m.g Citrus clementina HOM05D000293 ORTHO05D000180 1.4e-10 70.5 122 41.0
DCAR_005305 Daucus carota HOM05D000293 ORTHO05D000180 7.0e-10 68.2 138 36.2
Actinidia03781 Actinidia chinensis HOM05D000293 ORTHO05D000180 1.6e-09 67.0 105 40.0
vmacro14504 Vaccinium macrocarpon HOM05D000293 ORTHO05D000180 1.6e-09 67.0 124 37.9
Sed0023123 Sechium edule HOM05D000293 ORTHO05D000180 4.5e-09 65.5 106 35.8
RcHm_v2.0_Chr5g0062851 Rosa chinensis HOM05D000293 ORTHO05D000180 7.7e-09 64.7 117 38.5
Sc12g0001690 Simmondsia chinensis HOM05D000293 ORTHO05D000180 2.9e-08 62.8 75 48.0
FAN16G3307 Fragaria x ananassa HOM05D000293 ORTHO05D000180 3.8e-08 62.4 100 42.0
DCAR_006004 Daucus carota HOM05D000293 ORTHO05D000180 6.5e-08 61.6 128 34.4
FvH4_3g34960 Fragaria vesca HOM05D000293 ORTHO05D000180 8.5e-08 61.2 100 41.0
FAN11G2020 Fragaria x ananassa HOM05D000293 ORTHO05D000180 8.5e-08 61.2 100 41.0
FAN21G3826 Fragaria x ananassa HOM05D000293 ORTHO05D000180 8.5e-08 61.2 100 41.0
FAN25G3609 Fragaria x ananassa HOM05D000293 ORTHO05D000180 8.5e-08 61.2 100 41.0
Eucgr.J02073 Eucalyptus grandis HOM05D000293 ORTHO05D000180 1.1e-07 60.8 118 41.5
Gorai.013G265300 Gossypium raimondii HOM05D000293 ORTHO05D000180 1.1e-07 60.8 105 41.9
Rhsim01G0224600 Rhododendron simsii HOM05D000293 ORTHO05D000180 1.5e-07 60.5 105 41.9
THA.LOC104810803 Tarenaya hassleriana HOM05D000293 ORTHO05D000180 1.5e-07 60.5 115 38.3
Nn2g12890 Nelumbo nucifera HOM05D000293 ORTHO05D000180 1.9e-07 60.1 111 38.7
Gohir.D13G234500 Gossypium hirsutum HOM05D000293 ORTHO05D000180 2.5e-07 59.7 105 41.9
CAN.G241.41 Capsicum annuum HOM05D000293 ORTHO05D000180 3.2e-07 59.3 123 33.3
Gohir.A13G228900 Gossypium hirsutum HOM05D000293 ORTHO05D000180 3.2e-07 59.3 105 41.0
AUR62001838 Chenopodium quinoa HOM05D000293 ORTHO05D000180 5.5e-07 58.5 99 45.5
COL.COLO4_18445 Corchorus olitorius HOM05D000293 ORTHO05D000180 5.5e-07 58.5 136 40.4
AUR62009626 Chenopodium quinoa HOM05D000293 ORTHO05D000180 9.4e-07 57.8 99 42.4
ClCG02G020440 Citrullus lanatus HOM05D000293 ORTHO05D000180 1.2e-06 57.4 83 44.6
TAR636G2608 Trochodendron aralioides HOM05D000293 ORTHO05D000180 1.2e-06 57.4 91 39.6
THA.LOC104814867 Tarenaya hassleriana HOM05D000293 ORTHO05D000180 2.1e-06 56.6 123 34.1
Rhsim13G0087000 Rhododendron simsii HOM05D000293 ORTHO05D000180 2.7e-06 56.2 122 32.8
Sed0013462 Sechium edule HOM05D000293 ORTHO05D000180 2.7e-06 56.2 77 41.6
Sed0017929 Sechium edule HOM05D000293 ORTHO05D000180 6.1e-06 55.1 123 39.8
Sp5g15520 Schrenkiella parvula HOM05D000293 ORTHO05D000180 8.0e-06 54.7 114 36.0


User provided reference genes

Program Settings