Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G065900 Phaseolus vulgaris HOM05D004887 ORTHO05D006168 1.3e-207 726.1 359 100.0
VMungo1127G0043 Vigna mungo HOM05D004887 ORTHO05D006168 1.2e-197 693.0 359 93.9
Glyma.11G141400 Glycine max HOM05D004887 ORTHO05D006168 2.3e-196 688.7 359 93.3
Glyma.12G064800 Glycine max HOM05D004887 ORTHO05D006168 2.5e-190 668.7 359 91.4
TPR.G10217 Trifolium pratense HOM05D004887 ORTHO05D006168 7.8e-184 647.1 359 87.5
arahy.Tifrunner.gnm1.ann1.31UC9J Arachis hypogaea HOM05D004887 ORTHO05D006168 4.3e-182 641.3 360 86.7
Medtr4g063570 Medicago truncatula HOM05D004887 ORTHO05D006168 7.3e-182 640.6 359 86.4
arahy.Tifrunner.gnm1.ann1.1V42NR Arachis hypogaea HOM05D004887 ORTHO05D006168 1.2e-181 639.8 360 86.4
Lj3g0008400 Lotus japonicus HOM05D004887 ORTHO05D006168 2.6e-179 632.1 359 86.1
Lalb_Chr01g0003761 Lupinus albus HOM05D004887 ORTHO05D006168 9.9e-179 630.2 360 86.7
PGR102G2111 Punica granatum HOM05D004887 ORTHO05D006168 5.4e-169 597.8 356 79.8
Cpa.g.sc190.13 Carica papaya HOM05D004887 ORTHO05D006168 2.1e-165 585.9 356 79.5
Eucgr.B02388 Eucalyptus grandis HOM05D004887 ORTHO05D006168 4.9e-162 574.7 356 76.1
COL.COLO4_18471 Corchorus olitorius HOM05D004887 ORTHO05D006168 1.1e-161 573.5 356 78.4
CANSAT54G1644 Cannabis sativa HOM05D004887 ORTHO05D006168 1.4e-161 573.2 367 77.1
RcHm_v2.0_Chr5g0063631 Rosa chinensis HOM05D004887 ORTHO05D006168 1.4e-161 573.2 356 77.8
MD11G1143700 Malus domestica HOM05D004887 ORTHO05D006168 1.3e-159 566.6 356 77.2
FAN21G1310 Fragaria x ananassa HOM05D004887 ORTHO05D006168 1.8e-159 566.2 356 77.2
FvH4_3g35470 Fragaria vesca HOM05D004887 ORTHO05D006168 2.3e-159 565.8 356 77.2
Gohir.A03G039700 Gossypium hirsutum HOM05D004887 ORTHO05D006168 3.0e-159 565.5 355 76.6
Potri.001G237000 Populus trichocarpa HOM05D004887 ORTHO05D006168 3.0e-159 565.5 354 77.7
Dinv32870 Davidia involucrata HOM05D004887 ORTHO05D006168 1.3e-157 560.1 354 78.2
Gohir.D03G128400 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.6e-157 559.7 355 76.1
Gorai.003G135100 Gossypium raimondii HOM05D004887 ORTHO05D006168 2.1e-157 559.3 355 75.8
Migut.G01105 Erythranthe guttata HOM05D004887 ORTHO05D006168 3.7e-157 558.5 353 77.3
Prupe.6G081500 Prunus persica HOM05D004887 ORTHO05D006168 4.8e-157 558.1 351 76.4
THA.LOC104799466 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 6.2e-157 557.8 356 76.4
arahy.Tifrunner.gnm1.ann1.LTG2DU Arachis hypogaea HOM05D004887 ORTHO05D006168 8.2e-157 557.4 373 75.6
Duzib150G1309 Durio zibethinus HOM05D004887 ORTHO05D006168 8.2e-157 557.4 354 77.4
Migut.G01142 Erythranthe guttata HOM05D004887 ORTHO05D006168 1.4e-156 556.6 353 77.1
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla HOM05D004887 ORTHO05D006168 1.4e-156 556.6 356 78.1
Psat7g217880 Pisum sativum HOM05D004887 ORTHO05D006168 1.8e-156 556.2 386 73.8
Migut.D02114 Erythranthe guttata HOM05D004887 ORTHO05D006168 2.4e-156 555.8 356 76.4
MD03G1097100 Malus domestica HOM05D004887 ORTHO05D006168 2.6e-155 552.4 356 75.8
CiPaw.13G097700 Carya illinoinensis HOM05D004887 ORTHO05D006168 5.8e-155 551.2 352 76.7
Aqoxy4G02983 Aquilegia oxysepala HOM05D004887 ORTHO05D006168 2.2e-154 549.3 347 76.9
AT5G59960 Arabidopsis thaliana HOM05D004887 ORTHO05D006168 6.5e-154 547.7 360 75.6
GSVIVG01025008001 Vitis vinifera HOM05D004887 ORTHO05D006168 8.4e-154 547.4 352 75.9
Nitab4.5_0000610g0150 Nicotiana tabacum HOM05D004887 ORTHO05D006168 1.4e-153 546.6 354 76.0
Hund18927 Selenicereus undatus HOM05D004887 ORTHO05D006168 4.2e-153 545.0 354 74.3
Potri.009G028500 Populus trichocarpa HOM05D004887 ORTHO05D006168 5.5e-153 544.7 356 74.7
BcaB08g36206 Brassica carinata HOM05D004887 ORTHO05D006168 1.6e-152 543.1 354 75.1
Thhalv10013947m.g Eutrema salsugineum HOM05D004887 ORTHO05D006168 1.6e-152 543.1 342 77.5
Oeu041027.1 Olea europaea HOM05D004887 ORTHO05D006168 1.6e-152 543.1 353 75.6
TAR369G0226 Trochodendron aralioides HOM05D004887 ORTHO05D006168 1.6e-152 543.1 352 75.3
Actinidia37217 Actinidia chinensis HOM05D004887 ORTHO05D006168 2.7e-152 542.3 343 78.4
Manes.04G032300 Manihot esculenta HOM05D004887 ORTHO05D006168 2.7e-152 542.3 352 75.3
Manes.11G133000 Manihot esculenta HOM05D004887 ORTHO05D006168 3.5e-152 542.0 352 75.0
PSO384G2944 Papaver somniferum HOM05D004887 ORTHO05D006168 4.6e-152 541.6 349 74.5
BcaC04g19652 Brassica carinata HOM05D004887 ORTHO05D006168 7.9e-152 540.8 354 74.9
C09p52470 Brassica napus HOM05D004887 ORTHO05D006168 7.9e-152 540.8 354 74.9
BolC9t58114H Brassica oleracea HOM05D004887 ORTHO05D006168 7.9e-152 540.8 354 74.9
DCAR_018895 Daucus carota HOM05D004887 ORTHO05D006168 7.9e-152 540.8 354 75.1
BraA10t43799Z Brassica rapa HOM05D004887 ORTHO05D006168 1.0e-151 540.4 354 74.9
Cc01_g12500 Coffea canephora HOM05D004887 ORTHO05D006168 1.0e-151 540.4 350 76.0
Duzib168G0637 Durio zibethinus HOM05D004887 ORTHO05D006168 1.0e-151 540.4 354 76.0
Ciclev10028710m.g Citrus clementina HOM05D004887 ORTHO05D006168 3.0e-151 538.9 354 74.0
MBI14_g18541_MAGBIO Magnolia biondii HOM05D004887 ORTHO05D006168 3.0e-151 538.9 354 75.4
A10p17180 Brassica napus HOM05D004887 ORTHO05D006168 3.9e-151 538.5 354 74.6
Solyc11g073300.2 Solanum lycopersicum HOM05D004887 ORTHO05D006168 5.1e-151 538.1 355 75.2
Sopen11g030920 Solanum pennellii HOM05D004887 ORTHO05D006168 5.1e-151 538.1 355 74.9
CsaV3_1G033620 Cucumis sativus L. HOM05D004887 ORTHO05D006168 8.7e-151 537.3 352 74.4
PSO339G5095 Papaver somniferum HOM05D004887 ORTHO05D006168 1.1e-150 537.0 349 73.6
Sp6g21640 Schrenkiella parvula HOM05D004887 ORTHO05D006168 1.9e-150 536.2 354 74.6
AL781U10010 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 4.3e-150 535.0 339 77.3
Migut.N02667 Erythranthe guttata HOM05D004887 ORTHO05D006168 7.4e-150 534.3 354 74.3
AL8G36530 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 1.6e-149 533.1 385 70.1
CAN.G661.4 Capsicum annuum HOM05D004887 ORTHO05D006168 3.7e-149 531.9 360 72.8
Sc21g0005570 Simmondsia chinensis HOM05D004887 ORTHO05D006168 8.2e-149 530.8 355 71.5
Gorai.004G004400 Gossypium raimondii HOM05D004887 ORTHO05D006168 5.3e-148 528.1 348 74.1
A03p11380 Brassica napus HOM05D004887 ORTHO05D006168 4.5e-147 525.0 355 73.5
Gohir.D08G010900 Gossypium hirsutum HOM05D004887 ORTHO05D006168 4.5e-147 525.0 348 73.9
HanXRQChr04g0107001 Helianthus annuus HOM05D004887 ORTHO05D006168 1.1e-145 520.4 343 74.9
EL10Ac7g15978 Beta vulgaris HOM05D004887 ORTHO05D006168 1.4e-145 520.0 345 72.2
Aa31LG1G12090 Aethionema arabicum HOM05D004887 ORTHO05D006168 3.2e-145 518.8 346 74.3
Nn2g12934 Nelumbo nucifera HOM05D004887 ORTHO05D006168 9.4e-145 517.3 351 72.6
MSTRG.17840 Avicennia marina HOM05D004887 ORTHO05D006168 2.7e-144 515.8 351 72.4
ClCG03G001950 Citrullus lanatus HOM05D004887 ORTHO05D006168 6.1e-144 514.6 371 69.5
arahy.Tifrunner.gnm1.ann1.RHUE9Y Arachis hypogaea HOM05D004887 ORTHO05D006168 3.3e-142 508.8 304 80.6
ECA247G3571 Erigeron canadensis HOM05D004887 ORTHO05D006168 1.3e-141 506.9 340 74.1
HanXRQChr06g0175771 Helianthus annuus HOM05D004887 ORTHO05D006168 8.2e-141 504.2 341 74.2
TWI79G0894 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 4.1e-140 501.9 300 78.3
Lsat_1_v5_gn_9_22360 Lactuca sativa HOM05D004887 ORTHO05D006168 9.1e-140 500.7 340 72.9
SalBow3G3342 Salvia bowleyana HOM05D004887 ORTHO05D006168 9.1e-140 500.7 375 67.5
Lsat_1_v5_gn_8_77921 Lactuca sativa HOM05D004887 ORTHO05D006168 1.5e-139 500.0 342 72.5
Peaxi162Scf00406g00137 Petunia axillaris HOM05D004887 ORTHO05D006168 2.0e-139 499.6 354 70.3
Nitab4.5_0003782g0060 Nicotiana tabacum HOM05D004887 ORTHO05D006168 3.4e-139 498.8 354 71.2
Os01g0151600 Oryza sativa ssp. japonica HOM05D004887 ORTHO05D006168 1.7e-138 496.5 350 68.3
HPP92_015526 Vanilla planifolia HOM05D004887 ORTHO05D006168 1.2e-136 490.3 346 70.2
QL01p032955 Quercus lobata HOM05D004887 ORTHO05D006168 1.5e-131 473.4 341 71.3
Rhsim13G0085300 Rhododendron simsii HOM05D001446 ORTHO05D001360 2.0e-131 473.0 396 62.4
FAN11G2539 Fragaria x ananassa HOM05D004887 ORTHO05D006168 3.5e-131 472.2 342 71.9
CSS0023093 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 5.9e-131 471.5 339 72.3
FAN25G2556 Fragaria x ananassa HOM05D004887 ORTHO05D006168 2.2e-130 469.5 342 71.1
Duzib170G0837 Durio zibethinus HOM05D004887 ORTHO05D006168 8.5e-130 467.6 360 68.6
MELO3C020709.2 Cucumis melo HOM05D004887 ORTHO05D006168 9.4e-129 464.2 303 72.9
Cfa011464 Carpinus fangiana HOM05D004887 ORTHO05D006168 6.1e-128 461.5 347 68.6
Zm00001eb124290 Zea mays HOM05D004887 ORTHO05D006168 6.1e-128 461.5 344 65.7
Atru.chr3.3838 Acer truncatum HOM05D004887 ORTHO05D006168 1.0e-127 460.7 302 77.5
AUR62009609 Chenopodium quinoa HOM05D004887 ORTHO05D006168 1.0e-127 460.7 316 72.8
CSS0048955 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.4e-127 460.3 356 66.9
Lj1A157T41 Lonicera japonica HOM05D004887 ORTHO05D006168 1.4e-127 460.3 313 73.8
Psat7g218040 Pisum sativum HOM05D004887 ORTHO05D006168 3.9e-127 458.8 296 76.7
Haze_24049 Corylus avellana HOM05D004887 ORTHO05D006168 2.0e-126 456.4 301 76.1
Sed0009981 Sechium edule HOM05D004887 ORTHO05D006168 3.1e-124 449.1 284 74.6
SGA_v2.0_scaffold61G21266 Striga asiatica HOM05D004887 ORTHO05D006168 4.5e-123 445.3 345 68.4
THA.LOC104810819 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 1.5e-121 440.3 302 73.2
Ca_19183_v3 Cicer arietinum L. HOM05D004887 ORTHO05D006168 1.9e-121 439.9 266 85.3
AUR62001822 Chenopodium quinoa HOM05D004887 ORTHO05D006168 1.5e-118 430.3 299 71.6
Carub.0008s2049 Capsella rubella HOM05D004887 ORTHO05D006168 6.3e-117 424.9 259 78.4
TWI31G1179 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 1.1e-116 424.1 348 61.8
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 3.5e-115 419.1 308 68.2
BraA03t10452Z Brassica rapa HOM05D004887 ORTHO05D006168 8.5e-114 414.5 259 75.7
ATR0559G318 Amborella trichopoda HOM05D004887 ORTHO05D006168 2.5e-113 412.9 291 70.4
FAN16G2077 Fragaria x ananassa HOM05D001446 ORTHO05D001360 6.3e-109 398.3 265 76.6
unitig_899.g14894 Utricularia gibba HOM05D004887 ORTHO05D006168 1.8e-108 396.7 305 65.6
Thecc.09G325700 Theobroma cacao HOM05D004887 ORTHO05D006168 8.6e-106 387.9 251 78.9
Lj2C1057T15 Lonicera japonica HOM05D004887 ORTHO05D006168 1.9e-105 386.7 238 75.2
Sabra16G0142900 Salix brachista HOM05D001446 ORTHO05D001360 6.1e-104 381.7 393 55.7
Actinidia07046 Actinidia chinensis HOM05D004887 ORTHO05D006168 2.3e-103 379.8 257 74.3
Pp3c8_24390 Physcomitrium patens HOM05D004887 ORTHO05D006168 6.8e-103 378.3 342 54.1
Pp3c24_20310 Physcomitrium patens HOM05D004887 ORTHO05D006168 1.7e-101 373.6 360 52.5
vmacro03096 Vaccinium macrocarpon HOM05D004887 ORTHO05D006168 1.5e-97 360.5 309 62.5
SMO118G0033 Selaginella moellendorffii HOM05D004887 ORTHO05D006168 3.3e-97 359.4 340 54.1
TAR623G0510 Trochodendron aralioides HOM05D004887 ORTHO05D006168 4.3e-97 359.0 255 74.1
Mapoly0001s0555 Marchantia polymorpha HOM05D004887 ORTHO05D006168 1.4e-95 354.0 349 51.6
Dinv03548 Davidia involucrata HOM05D004887 ORTHO05D006168 3.2e-92 342.8 231 76.6
Psat7g218000 Pisum sativum HOM05D004887 ORTHO05D006168 4.6e-91 339.0 195 84.1
AagrBONN_evm.TU.Sc2ySwM_344.5355 Anthoceros agrestis HOM05D004887 ORTHO05D006168 6.2e-88 328.6 284 54.6
SalBow2G3032 Salvia bowleyana HOM05D004887 ORTHO05D006168 6.4e-85 318.5 254 66.1
Nn2g10420 Nelumbo nucifera HOM05D004887 ORTHO05D006168 8.3e-85 318.2 222 71.6
CARHR273590 Cardamine hirsuta HOM05D004887 ORTHO05D006168 3.9e-82 309.3 195 74.4
Gohir.A08G000181 Gossypium hirsutum HOM05D004887 ORTHO05D006168 7.3e-81 305.1 227 69.6
CBR_g46654 Chara braunii HOM05D004887 ORTHO05D006168 4.9e-77 292.4 325 45.8
Nitab4.5_0000610g0050 Nicotiana tabacum HOM05D004887 ORTHO05D006168 2.0e-62 243.8 365 42.7
CARHR273600 Cardamine hirsuta HOM05D004887 ORTHO05D006168 6.4e-61 238.8 158 76.6
PSO384G0451 Papaver somniferum HOM05D004887 ORTHO05D006168 8.7e-58 228.4 187 63.6
Sabra09G0019700 Salix brachista HOM05D004887 ORTHO05D006168 1.9e-44 184.1 178 58.4
Carub.0008s2068 Capsella rubella HOM05D004887 ORTHO05D006168 1.9e-33 147.5 106 68.9
C06p04980 Brassica napus HOM05D004887 ORTHO05D006168 7.2e-28 129.0 78 74.4
A02p35440 Brassica napus HOM05D004887 ORTHO05D006168 9.4e-28 128.6 78 73.1
BraA02t08545Z Brassica rapa HOM05D004887 ORTHO05D006168 9.4e-28 128.6 78 73.1
BolC6t35622H Brassica oleracea HOM05D004887 ORTHO05D006168 2.1e-27 127.5 79 73.4
C03p13170 Brassica napus HOM05D004887 ORTHO05D006168 4.6e-27 126.3 78 73.1
Duzib205G1865 Durio zibethinus HOM05D004887 ORTHO05D006168 6.1e-27 125.9 136 52.2
BolC3t13778H Brassica oleracea HOM05D004887 ORTHO05D006168 4.3e-25 119.8 61 82.0
C03p13130 Brassica napus HOM05D004887 ORTHO05D006168 2.6e-22 110.5 109 56.9
HanXRQChr07g0192801 Helianthus annuus HOM05D004887 ORTHO05D225384 1.8e-07 61.2 50 64.0
Lj1A771T11 Lonicera japonica HOM05D004887 ORTHO05D234499 2.4e-07 60.8 40 72.5


User provided reference genes

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