Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 2.7e-67 258.5 126 100.0
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 2.6e-65 251.9 127 97.6
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 9.8e-65 250.0 128 97.7
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 8.3e-64 246.9 128 95.3
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 4.2e-60 234.6 126 89.7
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 4.0e-58 228.0 128 86.7
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 6.8e-58 227.3 128 86.7
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 4.4e-57 224.6 128 85.9
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 5.4e-55 217.6 128 82.0
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 7.0e-55 217.2 128 82.0
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 9.2e-55 216.9 128 83.6
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 1.2e-54 216.5 132 78.8
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 1.2e-54 216.5 133 79.7
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 2.0e-54 215.7 126 83.3
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 3.5e-54 214.9 129 79.1
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 5.9e-54 214.2 134 79.1
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 5.9e-54 214.2 130 82.3
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 1.3e-53 213.0 131 79.4
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 2.3e-53 212.2 128 79.7
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 2.9e-53 211.8 128 79.7
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 6.6e-53 210.7 131 80.2
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 6.6e-53 210.7 130 80.0
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 6.6e-53 210.7 126 82.5
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 8.6e-53 210.3 130 80.0
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 8.6e-53 210.3 130 80.0
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 8.6e-53 210.3 130 79.2
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 1.1e-52 209.9 131 77.9
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 1.1e-52 209.9 131 77.9
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 1.1e-52 209.9 131 77.9
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 1.1e-52 209.9 128 79.7
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 1.5e-52 209.5 128 78.9
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 1.9e-52 209.1 128 79.7
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 2.5e-52 208.8 131 78.6
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 3.3e-52 208.4 131 77.1
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 3.3e-52 208.4 130 80.0
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 4.3e-52 208.0 132 78.8
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 4.3e-52 208.0 129 78.3
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 7.3e-52 207.2 131 77.9
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 7.3e-52 207.2 121 79.3
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 7.3e-52 207.2 128 78.1
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 7.3e-52 207.2 129 79.1
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 7.3e-52 207.2 131 78.6
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 9.5e-52 206.8 130 77.7
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 9.5e-52 206.8 130 78.5
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 9.5e-52 206.8 130 78.5
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.2e-51 206.5 128 80.5
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.2e-51 206.5 130 78.5
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 1.2e-51 206.5 132 78.0
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.2e-51 206.5 131 77.9
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.2e-51 206.5 131 77.9
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.2e-51 206.5 134 77.6
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.6e-51 206.1 126 76.2
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 2.1e-51 205.7 129 77.5
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 2.1e-51 205.7 134 75.4
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 2.8e-51 205.3 127 78.7
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.8e-51 205.3 131 77.1
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 2.8e-51 205.3 132 75.8
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 3.6e-51 204.9 128 76.6
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 3.6e-51 204.9 128 76.6
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 4.7e-51 204.5 115 85.2
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 8.0e-51 203.8 132 77.3
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 1.0e-50 203.4 129 77.5
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.8e-50 202.6 131 76.3
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 1.8e-50 202.6 128 77.3
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 1.8e-50 202.6 131 73.3
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.3e-50 202.2 131 75.6
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.3e-50 202.2 131 77.1
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 2.3e-50 202.2 130 76.2
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 3.1e-50 201.8 127 76.4
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.1e-50 201.8 131 76.3
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 4.0e-50 201.4 133 75.2
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 5.2e-50 201.1 125 74.4
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 5.2e-50 201.1 129 76.0
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 5.2e-50 201.1 130 76.2
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 5.2e-50 201.1 130 76.2
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 6.8e-50 200.7 129 76.0
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 8.9e-50 200.3 133 76.7
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 8.9e-50 200.3 134 73.9
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 8.9e-50 200.3 125 76.8
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 8.9e-50 200.3 133 75.2
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 1.2e-49 199.9 131 73.3
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.5e-49 199.5 132 75.8
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 1.5e-49 199.5 126 73.8
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.0e-49 199.1 126 74.6
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 2.0e-49 199.1 131 75.6
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 2.6e-49 198.7 121 78.5
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 2.6e-49 198.7 128 73.4
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 3.4e-49 198.4 133 72.9
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 3.4e-49 198.4 129 72.1
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 3.4e-49 198.4 125 75.2
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.4e-49 198.4 132 72.7
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.4e-49 198.4 129 76.7
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.4e-49 198.0 128 75.8
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 4.4e-49 198.0 133 73.7
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 5.8e-49 197.6 128 75.8
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 5.8e-49 197.6 126 77.8
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 5.8e-49 197.6 126 73.8
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 7.5e-49 197.2 126 77.8
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.3e-48 196.4 133 72.2
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 1.7e-48 196.1 133 72.9
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 1.7e-48 196.1 129 75.2
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 2.9e-48 195.3 133 71.4
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.9e-48 195.3 126 73.0
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 3.7e-48 194.9 128 75.8
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 4.9e-48 194.5 126 76.2
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 8.3e-48 193.7 134 70.9
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 8.3e-48 193.7 125 73.6
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.1e-47 193.4 133 70.7
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 1.4e-47 193.0 126 70.6
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 1.4e-47 193.0 127 74.8
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 1.9e-47 192.6 125 77.6
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 1.9e-47 192.6 133 71.4
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.9e-47 192.6 129 73.6
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 2.4e-47 192.2 133 70.7
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 2.4e-47 192.2 125 72.8
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 3.2e-47 191.8 145 68.3
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 3.2e-47 191.8 133 70.7
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 4.1e-47 191.4 130 70.0
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 5.4e-47 191.0 134 70.1
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 5.4e-47 191.0 120 78.3
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 5.4e-47 191.0 130 70.0
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 5.4e-47 191.0 130 70.0
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 5.4e-47 191.0 130 70.0
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 7.0e-47 190.7 130 69.2
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 1.2e-46 189.9 126 69.8
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 1.2e-46 189.9 133 69.2
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 1.2e-46 189.9 133 69.2
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 1.6e-46 189.5 133 69.9
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 1.6e-46 189.5 133 69.2
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 2.0e-46 189.1 129 74.4
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 2.7e-46 188.7 127 70.9
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 3.5e-46 188.3 112 76.8
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.3e-45 186.4 118 73.7
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.3e-45 185.7 121 74.4
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 2.3e-45 185.7 118 74.6
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 3.0e-45 185.3 113 76.1
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 3.9e-45 184.9 127 67.7
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 1.2e-43 179.9 121 73.6
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 2.8e-43 178.7 116 70.7
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 3.6e-43 178.3 118 71.2
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 4.7e-43 177.9 135 68.9
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 5.2e-42 174.5 114 69.3
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 7.5e-41 170.6 131 64.9
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 1.4e-39 166.4 117 65.0
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 1.4e-39 166.4 127 59.8
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 3.2e-39 165.2 135 63.0
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 3.0e-37 158.7 123 63.4
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 3.6e-35 151.8 91 76.9
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 4.4e-33 144.8 129 55.0
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 4.1e-31 138.3 119 53.8
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 2.7e-30 135.6 78 80.8
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 5.2e-26 121.3 75 76.0
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.0e-25 119.4 85 70.6
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.9e-23 112.8 74 73.0
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 4.6e-22 108.2 71 67.6
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.0e-21 107.1 77 67.5
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 3.0e-21 105.5 77 66.2
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 7.3e-20 100.9 56 87.5
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.1e-19 99.4 60 80.0
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.8e-18 96.3 64 64.1
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 2.5e-12 75.9 50 66.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 9.6e-12 73.9 58 62.1
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 4.5e-09 65.1 95 33.7
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 5.5e-07 58.2 42 64.3


User provided reference genes

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