Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 7.6e-130 467.2 247 100.0
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 6.1e-119 431.0 245 93.1
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 7.0e-107 391.0 248 83.5
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 2.3e-102 375.9 247 81.4
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 3.5e-90 335.5 247 70.0
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 3.5e-90 335.5 247 70.0
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 5.0e-89 331.6 253 70.8
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 6.5e-89 331.3 245 70.6
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 5.5e-88 328.2 253 71.9
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 1.2e-85 320.5 248 67.3
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 4.4e-85 318.5 253 69.6
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 5.7e-85 318.2 266 68.8
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 2.8e-84 315.8 265 67.2
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 4.9e-84 315.1 263 67.3
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 4.9e-84 315.1 253 68.8
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 1.1e-83 313.9 239 72.0
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.1e-83 313.9 255 67.8
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 2.4e-83 312.8 243 71.6
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 2.4e-83 312.8 243 71.6
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 5.4e-83 311.6 256 66.8
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 9.1e-83 310.8 266 68.4
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 1.6e-82 310.1 250 67.2
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 2.7e-82 309.3 252 70.6
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 7.7e-82 307.8 243 70.0
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 7.7e-82 307.8 249 67.1
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 2.9e-81 305.8 236 71.2
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 8.6e-81 304.3 245 69.4
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 1.1e-80 303.9 261 63.2
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 2.5e-80 302.8 245 68.6
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 7.2e-80 301.2 254 67.3
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 8.0e-79 297.7 256 67.6
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 1.0e-78 297.4 199 75.4
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 1.0e-78 297.4 262 65.3
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 1.0e-78 297.4 198 77.8
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 1.4e-78 297.0 248 67.7
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 1.4e-78 297.0 258 66.3
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 5.2e-78 295.0 252 65.9
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 5.2e-78 295.0 245 66.9
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 8.9e-78 294.3 250 65.2
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 1.2e-77 293.9 256 65.2
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 1.5e-77 293.5 245 65.3
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 2.0e-77 293.1 213 72.3
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 2.6e-77 292.7 242 66.9
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 3.4e-77 292.4 244 67.2
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 4.4e-77 292.0 252 65.1
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 5.7e-77 291.6 250 65.6
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 9.8e-77 290.8 255 65.5
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 1.3e-76 290.4 256 64.5
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 1.3e-76 290.4 256 64.5
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 1.7e-76 290.0 193 76.7
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 2.9e-76 289.3 253 64.0
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 2.9e-76 289.3 253 64.0
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 2.9e-76 289.3 265 62.6
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 3.7e-76 288.9 208 73.1
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 3.7e-76 288.9 208 73.1
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 4.9e-76 288.5 259 64.5
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 1.4e-75 287.0 257 61.9
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 2.4e-75 286.2 189 78.3
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 1.2e-74 283.9 255 64.7
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 1.2e-74 283.9 255 64.7
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 3.5e-74 282.3 252 62.7
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 4.6e-74 282.0 209 68.9
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 4.6e-74 282.0 240 62.9
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 7.8e-74 281.2 252 62.3
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 2.9e-73 279.3 263 60.1
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 3.9e-73 278.9 245 62.4
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 1.1e-72 277.3 191 74.3
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 1.5e-72 276.9 199 72.9
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 1.5e-72 276.9 207 68.6
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 1.9e-72 276.6 257 62.3
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 3.3e-72 275.8 229 65.5
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 4.3e-72 275.4 219 68.5
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 5.6e-72 275.0 225 64.0
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 9.5e-72 274.2 245 60.8
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 2.8e-71 272.7 255 62.0
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 2.8e-71 272.7 211 68.2
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 2.8e-71 272.7 189 72.5
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 2.3e-70 269.6 197 70.6
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 8.9e-70 267.7 196 66.8
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 2.0e-69 266.5 202 66.8
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 1.3e-68 263.8 247 61.9
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 1.7e-68 263.5 257 59.9
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 4.9e-68 261.9 232 63.8
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 1.4e-67 260.4 237 64.1
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 9.2e-67 257.7 234 59.0
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 1.6e-66 256.9 231 61.9
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 2.0e-66 256.5 198 67.7
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 4.6e-66 255.4 229 62.4
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 1.0e-65 254.2 198 67.7
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 1.3e-65 253.8 225 62.2
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 1.3e-65 253.8 198 67.2
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 1.3e-65 253.8 198 67.2
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 1.7e-65 253.4 198 67.7
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 3.9e-65 252.3 255 58.4
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 3.9e-65 252.3 196 67.3
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 5.0e-65 251.9 263 55.5
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 8.6e-65 251.1 193 64.8
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 1.9e-64 250.0 193 64.8
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 3.3e-64 249.2 259 55.6
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 1.2e-63 247.3 251 57.4
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 2.8e-63 246.1 209 60.8
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 4.0e-62 242.3 177 71.2
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 1.5e-61 240.4 257 55.6
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 7.5e-61 238.0 227 60.8
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 1.3e-60 237.3 155 78.1
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 1.2e-58 230.7 180 62.2
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 2.8e-55 219.5 250 54.8
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 5.8e-53 211.8 174 60.3
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 1.3e-52 210.7 192 58.9
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 4.1e-51 205.7 151 71.5
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 1.3e-44 184.1 140 66.4
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 1.7e-28 130.6 98 68.4
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 2.1e-23 113.6 101 63.4
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 1.2e-21 107.8 95 60.0
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 1.6e-18 97.4 71 62.0
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-17 94.4 122 45.9
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 5.1e-17 92.4 115 39.1
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 2.1e-15 87.0 71 59.2
Actinidia06890 Actinidia chinensis HOM05D006682 ORTHO05D054450 5.7e-08 62.4 62 54.8
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 9.7e-08 61.6 55 61.8
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 3.7e-07 59.7 43 69.8


User provided reference genes

Program Settings