Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 2.6e-163 578.6 274 100.0
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 8.4e-146 520.4 276 89.9
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 5.9e-139 497.7 282 84.8
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 5.0e-130 468.0 270 80.7
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 2.2e-125 452.6 258 81.4
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 3.7e-125 451.8 263 79.8
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 9.1e-124 447.2 271 78.2
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 3.3e-118 428.7 275 72.4
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 9.7e-118 427.2 263 74.9
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 2.8e-117 425.6 263 75.3
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 2.8e-117 425.6 272 72.8
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 1.2e-115 420.2 265 74.0
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 1.6e-115 419.9 264 73.1
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 2.0e-115 419.5 263 73.0
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 2.6e-115 419.1 263 73.4
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 3.5e-115 418.7 259 73.7
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 3.5e-115 418.7 267 74.2
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 2.2e-114 416.0 263 73.0
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 2.9e-114 415.6 264 71.2
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 2.9e-114 415.6 263 72.6
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 5.0e-114 414.8 263 71.9
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 5.0e-114 414.8 263 71.9
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 1.5e-113 413.3 272 71.3
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 9.4e-113 410.6 265 71.7
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 1.6e-112 409.8 262 71.8
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 2.7e-112 409.1 263 72.2
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 4.0e-111 405.2 262 69.1
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 1.5e-110 403.3 262 69.5
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 2.6e-110 402.5 262 68.7
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 2.6e-110 402.5 259 69.5
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.6e-110 402.5 264 68.9
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.6e-110 402.5 264 68.9
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 3.3e-110 402.1 263 68.8
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 4.4e-110 401.7 264 70.5
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 9.7e-110 400.6 264 70.5
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 9.7e-110 400.6 268 67.9
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 9.7e-110 400.6 267 69.7
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 1.3e-109 400.2 266 68.4
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 4.8e-109 398.3 262 69.1
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 1.4e-108 396.7 243 72.8
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 1.8e-108 396.4 262 68.7
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 5.3e-108 394.8 264 68.9
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 7.0e-108 394.4 273 65.6
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.0e-107 392.9 245 73.5
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 4.5e-107 391.7 282 66.0
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 8.5e-106 387.5 273 67.8
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 3.2e-105 385.6 263 63.9
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 3.2e-105 385.6 264 67.0
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 4.2e-105 385.2 264 66.7
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 1.2e-104 383.6 264 67.4
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 1.6e-104 383.3 265 65.7
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 1.0e-103 380.6 244 75.4
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 1.0e-103 380.6 248 70.2
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 1.4e-103 380.2 244 75.4
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 1.4e-103 380.2 268 63.1
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 1.8e-103 379.8 262 67.2
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 2.3e-103 379.4 272 66.5
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 2.3e-103 379.4 264 67.4
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 2.3e-103 379.4 262 65.3
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 3.0e-103 379.0 248 69.4
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 5.2e-103 378.3 262 64.9
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 8.8e-103 377.5 262 67.2
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 1.2e-102 377.1 263 66.2
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 1.2e-102 377.1 264 66.3
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 3.4e-102 375.6 262 67.6
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 4.8e-101 371.7 263 64.6
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 3.1e-100 369.0 232 74.1
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 1.6e-99 366.7 233 71.7
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 1.3e-98 363.6 262 63.4
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.9e-98 362.5 254 67.7
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 2.9e-98 362.5 248 65.7
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 3.8e-98 362.1 252 65.1
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 1.5e-97 360.1 243 68.7
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 1.5e-97 360.1 284 58.8
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 2.3e-95 352.8 271 60.5
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 7.5e-94 347.8 282 61.0
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 1.2e-88 330.5 222 67.1
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 6.1e-88 328.2 243 63.4
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 4.0e-87 325.5 244 62.3
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 6.8e-87 324.7 247 63.2
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 1.2e-86 323.9 236 60.6
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 4.9e-85 318.5 204 77.9
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 1.8e-84 316.6 230 63.0
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 4.7e-80 302.0 203 66.0
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 1.5e-78 297.0 241 58.9
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 5.8e-78 295.0 175 77.1
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.4e-76 289.7 193 67.4
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 3.2e-76 289.3 238 57.6
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 6.6e-74 281.6 183 68.9
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 8.1e-72 274.6 266 52.3
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 1.5e-70 270.4 234 49.6
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 3.7e-69 265.8 236 47.5
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 8.9e-63 244.6 152 74.3
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 9.6e-57 224.6 155 67.7
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 4.0e-55 219.2 138 68.1
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 1.2e-51 207.6 161 57.1
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 3.0e-50 203.0 138 70.3
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 1.5e-49 200.7 144 64.6
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 2.4e-47 193.4 149 62.4
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 9.0e-47 191.4 131 71.0
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 9.0e-47 191.4 131 71.0
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 1.4e-44 184.1 108 75.9
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.9e-44 183.7 129 62.8
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 6.7e-42 175.3 152 59.9
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 4.3e-33 146.0 237 33.8
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 1.3e-32 144.4 93 69.9
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 2.8e-32 143.3 165 50.9
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 1.0e-29 134.8 244 38.1
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 1.6e-24 117.5 95 58.9
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 1.6e-24 117.5 105 56.2
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.4e-23 114.4 62 79.0
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 3.2e-20 103.2 68 69.1
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.4e-15 87.0 50 74.0
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.6e-14 83.6 43 86.0
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.6e-14 83.6 43 86.0
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 1.4e-12 77.8 55 54.5
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 4.7e-11 72.8 146 29.5
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 1.5e-09 67.8 55 60.0
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 2.2e-08 63.9 45 60.0
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 2.2e-08 63.9 45 60.0
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 6.3e-08 62.4 77 42.9
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 4.1e-07 59.7 38 65.8
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 4.1e-07 59.7 38 65.8
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 9.1e-07 58.5 74 43.2
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 1.5e-06 57.8 36 63.9


User provided reference genes

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