Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 4.4e-131 471.5 266 100.0
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 1.2e-112 410.2 269 87.7
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 1.2e-93 347.1 270 70.7
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 2.8e-85 319.3 267 67.8
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 2.2e-82 309.7 270 67.0
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 6.4e-82 308.1 268 63.4
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 6.8e-76 288.1 272 59.9
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 3.4e-75 285.8 241 66.0
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 7.6e-75 284.6 272 58.5
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 2.2e-74 283.1 241 68.5
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 2.9e-74 282.7 239 68.2
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 6.4e-74 281.6 225 67.6
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 1.9e-73 280.0 274 58.0
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 1.9e-73 280.0 275 60.4
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 5.4e-73 278.5 270 59.6
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 1.6e-72 276.9 190 74.2
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 2.7e-72 276.2 241 63.1
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 7.8e-72 274.6 190 68.9
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 5.1e-71 271.9 242 61.6
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 5.1e-71 271.9 267 55.1
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.9e-70 270.0 208 67.8
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 2.5e-70 269.6 195 69.2
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 5.6e-70 268.5 213 66.2
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 7.3e-70 268.1 270 57.0
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 9.6e-70 267.7 237 62.9
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 1.1e-68 264.2 191 69.6
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.8e-68 263.5 224 63.4
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 2.4e-68 263.1 266 59.4
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 4.0e-68 262.3 192 69.3
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 4.0e-68 262.3 224 63.4
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 6.9e-68 261.5 169 75.1
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 6.9e-68 261.5 243 61.3
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 2.0e-67 260.0 207 67.1
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 2.6e-67 259.6 267 55.1
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 2.6e-67 259.6 240 60.8
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.4e-67 259.2 190 67.4
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 3.4e-67 259.2 190 67.4
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 9.9e-67 257.7 197 67.0
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 9.9e-67 257.7 239 63.6
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 9.9e-67 257.7 190 66.8
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.3e-66 257.3 237 59.1
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 1.7e-66 256.9 243 56.8
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 2.9e-66 256.1 190 66.8
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 3.8e-66 255.8 211 63.5
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 3.8e-66 255.8 195 66.7
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 3.8e-66 255.8 195 66.7
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 4.9e-66 255.4 230 63.9
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 6.4e-66 255.0 243 58.4
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 6.4e-66 255.0 243 58.0
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.1e-65 254.2 242 59.9
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.9e-65 253.4 230 60.4
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 1.9e-65 253.4 194 65.5
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.4e-65 253.1 190 66.8
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 3.2e-65 252.7 230 60.4
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.2e-65 252.7 190 66.8
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 5.4e-65 251.9 191 67.0
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 5.4e-65 251.9 190 66.8
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 9.3e-65 251.1 212 61.3
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 2.1e-64 250.0 183 67.8
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 4.6e-64 248.8 212 60.4
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 1.0e-63 247.7 195 68.2
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 1.0e-63 247.7 182 68.1
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 1.0e-63 247.7 213 61.0
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.0e-63 247.7 232 58.2
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 8.7e-63 244.6 190 64.7
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.1e-62 244.2 232 58.2
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 1.5e-62 243.8 194 63.9
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 1.5e-62 243.8 192 63.5
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 2.5e-62 243.0 182 65.4
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 2.5e-62 243.0 192 63.5
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 4.3e-62 242.3 193 64.2
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 1.6e-61 240.4 248 56.0
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 2.1e-61 240.0 190 63.7
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 4.8e-61 238.8 190 63.7
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 3.1e-60 236.1 280 52.5
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 4.0e-60 235.7 197 61.9
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 5.3e-60 235.3 196 60.2
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 9.0e-60 234.6 255 53.7
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 2.0e-59 233.4 196 60.7
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 2.0e-59 233.4 194 59.3
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 4.5e-59 232.3 211 57.3
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 4.5e-59 232.3 232 58.2
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 5.8e-59 231.9 196 63.3
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 9.9e-59 231.1 243 57.2
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 1.3e-58 230.7 195 60.0
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 8.4e-58 228.0 200 62.0
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 1.1e-57 227.6 229 55.9
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 1.4e-57 227.3 198 60.6
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 1.4e-57 227.3 198 59.6
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 1.9e-57 226.9 198 60.1
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 3.2e-57 226.1 195 59.5
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 3.2e-57 226.1 205 58.5
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 3.2e-57 226.1 205 58.5
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 3.2e-57 226.1 205 58.5
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 5.4e-57 225.3 198 60.6
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 5.4e-57 225.3 194 58.8
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 1.2e-56 224.2 211 57.8
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 1.6e-56 223.8 147 72.8
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 2.1e-56 223.4 244 54.1
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 6.0e-56 221.9 267 52.8
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 6.0e-56 221.9 197 59.4
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 7.9e-56 221.5 194 58.8
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 2.3e-55 219.9 244 54.1
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 2.3e-55 219.9 205 57.1
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 3.9e-55 219.2 220 53.6
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 6.7e-55 218.4 210 56.2
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 8.7e-55 218.0 202 59.4
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 3.3e-54 216.1 265 49.1
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 3.8e-50 202.6 151 64.9
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 1.3e-42 177.6 153 55.6
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 1.9e-41 173.7 201 46.3
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 4.2e-41 172.6 247 47.0
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 3.5e-40 169.5 158 55.1
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 7.9e-40 168.3 141 56.7
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.0e-39 167.9 158 54.4
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 3.0e-39 166.4 181 47.0
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 5.9e-35 152.1 235 42.1
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 2.7e-32 143.3 160 45.6
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 2.5e-30 136.7 110 60.0
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 3.1e-28 129.8 151 44.4
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 1.5e-27 127.5 173 41.0
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 5.0e-26 122.5 109 58.7


User provided reference genes

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