Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G054200 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 7.0e-251 870.2 444 100.0
VMungo1127G1046 Vigna mungo HOM05D008235 ORTHO05D009358 5.3e-206 721.1 433 86.6
Glyma.12G052200 Glycine max HOM05D008235 ORTHO05D009358 6.5e-156 554.7 418 71.8
Glyma.11G127600 Glycine max HOM05D008235 ORTHO05D009358 4.2e-155 552.0 402 72.9
Lj3g0014084 Lotus japonicus HOM05D008235 ORTHO05D009358 5.8e-112 408.7 453 55.4
Ca_20789_v3 Cicer arietinum L. HOM05D008235 ORTHO05D009358 1.9e-107 393.7 418 56.0
arahy.Tifrunner.gnm1.ann1.TK6P88 Arachis hypogaea HOM05D008235 ORTHO05D009358 3.2e-102 376.3 432 54.2
Lalb_Chr22g0352131 Lupinus albus HOM05D008235 ORTHO05D009358 2.1e-101 373.6 453 52.1
arahy.Tifrunner.gnm1.ann1.V6VI7P Arachis hypogaea HOM05D008235 ORTHO05D009358 2.7e-101 373.2 428 54.4
Glyma.13G344300 Glycine max HOM05D008235 ORTHO05D009358 2.8e-82 310.1 359 49.9
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 6.5e-63 245.7 424 40.1
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 8.2e-58 228.8 419 39.4
Medtr4g067260 Medicago truncatula HOM05D008235 ORTHO05D009358 1.7e-55 221.1 476 37.4
TPR.G34237 Trifolium pratense HOM05D008235 ORTHO05D009358 2.1e-53 214.2 414 39.9
Psat7g208600 Pisum sativum HOM05D008235 ORTHO05D009358 5.3e-49 199.5 402 38.8
MD04G1040900 Malus domestica HOM05D008235 ORTHO05D009358 5.2e-44 183.0 448 33.9
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 8.3e-42 175.6 413 32.4
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 2.8e-34 150.6 426 31.2
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 4.9e-34 149.8 305 34.8
Phvul.005G153000 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 1.4e-33 148.3 425 32.7
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 1.0e-31 142.1 418 31.3
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 5.0e-31 139.8 379 34.0
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 3.3e-30 137.1 437 30.2
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 4.2e-30 136.7 376 34.3
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 2.1e-29 134.4 328 32.6
Actinidia34601 Actinidia chinensis HOM05D008235 ORTHO05D009358 1.0e-28 132.1 443 32.7
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 3.0e-28 130.6 426 29.3
TAR636G0036 Trochodendron aralioides HOM05D008235 ORTHO05D009358 8.9e-28 129.0 300 31.0
Actinidia35979 Actinidia chinensis HOM05D008235 ORTHO05D009358 3.4e-27 127.1 388 32.5
Manes.11G121000 Manihot esculenta HOM05D008235 ORTHO05D009358 5.7e-27 126.3 433 30.9
MELO3C017713.2 Cucumis melo HOM05D008235 ORTHO05D009358 9.8e-27 125.6 389 30.3
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 9.8e-27 125.6 310 32.9
ClCG07G015680 Citrullus lanatus HOM05D008235 ORTHO05D009358 1.7e-26 124.8 389 30.6
Nn1g09629 Nelumbo nucifera HOM05D008235 ORTHO05D009358 3.7e-26 123.6 447 31.3
CsaV3_4G003430 Cucumis sativus L. HOM05D008235 ORTHO05D009358 6.4e-26 122.9 381 29.7
Glyma.15G030050 Glycine max HOM05D008235 ORTHO05D009358 3.5e-24 117.1 169 48.5
Sed0015774 Sechium edule HOM05D008235 ORTHO05D009358 4.6e-24 116.7 407 28.0
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 5.9e-24 116.3 399 30.6
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 7.8e-24 115.9 388 29.4
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 1.3e-23 115.2 459 27.5
Gohir.D02G114100 Gossypium hirsutum HOM05D008235 ORTHO05D009358 2.9e-23 114.0 389 27.5
Gohir.A03G088800 Gossypium hirsutum HOM05D008235 ORTHO05D009358 2.5e-22 110.9 367 27.8
Gorai.005G128900 Gossypium raimondii HOM05D008235 ORTHO05D009358 7.3e-22 109.4 386 27.2
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 1.6e-21 108.2 439 28.0
CSS0049607 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 2.1e-21 107.8 320 30.0
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 2.0e-19 101.3 412 28.4
Duzib268G0443 Durio zibethinus HOM05D008235 ORTHO05D009358 1.7e-18 98.2 236 29.2
COL.COLO4_07668 Corchorus olitorius HOM05D008235 ORTHO05D009358 3.5e-16 90.5 317 27.1
GSVIVG01010760001 Vitis vinifera HOM05D008235 ORTHO05D009358 3.5e-16 90.5 335 28.4
PSO017G5357 Papaver somniferum HOM05D066249 ORTHO05D009358 6.6e-15 86.3 385 26.8
THA.LOC104803712 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 1.9e-14 84.7 226 32.3
PSO675G1581 Papaver somniferum HOM05D066249 ORTHO05D009358 9.5e-14 82.4 385 27.0
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.1e-12 79.0 332 26.5
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 5.8e-11 73.2 197 27.9
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 9.8e-11 72.4 340 27.6
THA.LOC104800392 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 9.8e-11 72.4 317 28.1
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 6.4e-10 69.7 318 28.6
RhsimUnG0195000 Rhododendron simsii HOM05D008235 ORTHO05D009358 6.4e-10 69.7 318 28.6
Sp5g03710 Schrenkiella parvula HOM05D009929 ORTHO05D009358 2.4e-09 67.8 232 29.7
Oeu053824.1 Olea europaea HOM05D008235 ORTHO05D009358 3.2e-09 67.4 377 25.2
vmacro00622 Vaccinium macrocarpon HOM05D008235 ORTHO05D009358 4.1e-09 67.0 424 26.4
Aa31LG1G25120 Aethionema arabicum HOM05D009929 ORTHO05D006942 2.1e-08 64.7 213 28.2
Aqoxy2G04121 Aquilegia oxysepala HOM05D008235 ORTHO05D009358 2.1e-08 64.7 434 26.3
Cpa.g.sc9.283 Carica papaya HOM05D008235 ORTHO05D009358 1.0e-07 62.4 439 23.9
Peaxi162Scf01052g00325 Petunia axillaris HOM05D014650 ORTHO05D009358 1.3e-07 62.0 71 46.5
AL5G41340 Arabidopsis lyrata HOM05D009929 ORTHO05D009358 6.6e-07 59.7 231 29.4
AT3G59430 Arabidopsis thaliana HOM05D009929 ORTHO05D009358 8.6e-07 59.3 229 28.8
Cc03_g12910 Coffea canephora HOM05D008235 ORTHO05D009358 1.5e-06 58.5 386 25.6
Solyc05g050740.3 Solanum lycopersicum HOM05D014650 ORTHO05D009358 1.5e-06 58.5 181 29.8
Nitab4.5_0002598g0040 Nicotiana tabacum HOM05D014650 ORTHO05D009358 1.9e-06 58.2 221 28.1
Hund03161 Selenicereus undatus HOM05D019141 ORTHO05D009358 1.9e-06 58.2 202 28.7
CAN.G112.20 Capsicum annuum HOM05D014650 ORTHO05D022197 3.3e-06 57.4 135 31.9


User provided reference genes

Program Settings