Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 2.3e-35 151.8 81 100.0
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.2e-31 139.4 81 91.4
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 1.2e-28 129.4 82 85.4
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 9.8e-18 93.2 86 66.3
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 2.9e-17 91.7 85 61.2
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 8.3e-17 90.1 85 60.0
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 4.6e-15 84.3 84 66.7
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 9.5e-13 76.6 85 62.4
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.1e-12 73.6 79 57.0
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 1.2e-10 69.7 82 53.7
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 2.6e-10 68.6 63 63.5
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 3.4e-10 68.2 89 58.4
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 9.9e-10 66.6 83 53.0
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.3e-09 66.2 81 49.4
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.7e-09 65.9 81 48.1
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 6.4e-09 63.9 84 52.4
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 6.4e-09 63.9 82 52.4
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 6.4e-09 63.9 82 52.4
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.1e-08 63.2 83 48.2
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.4e-08 62.8 81 48.1
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-08 62.4 82 51.2
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.9e-08 62.4 82 50.0
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 1.9e-08 62.4 76 50.0
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-08 61.6 83 47.0
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-08 61.6 74 51.4
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 3.2e-08 61.6 83 50.6
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 3.2e-08 61.6 82 47.6
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 4.1e-08 61.2 82 51.2
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.4e-08 60.8 81 46.9
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 5.4e-08 60.8 82 51.2
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.1e-08 60.5 83 45.8
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 7.1e-08 60.5 81 46.9
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 9.2e-08 60.1 71 53.5
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.2e-07 59.7 81 45.7
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 2.7e-07 58.5 82 51.2
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 3.5e-07 58.2 79 49.4
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 3.5e-07 58.2 70 51.4
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 3.5e-07 58.2 82 47.6
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.6e-07 57.8 82 48.8
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 4.6e-07 57.8 81 49.4
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.0e-07 57.4 81 46.9
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 6.0e-07 57.4 82 45.1
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.8e-07 57.0 82 51.2
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.8e-07 57.0 81 48.1
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 7.8e-07 57.0 81 49.4
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 7.8e-07 57.0 71 50.7
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 7.8e-07 57.0 71 50.7
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.0e-06 56.6 82 48.8
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 1.0e-06 56.6 79 51.9
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 1.0e-06 56.6 82 46.3
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.0e-06 56.6 82 48.8
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-06 56.2 82 52.4
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 1.3e-06 56.2 71 45.1
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 1.3e-06 56.2 71 50.7
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.3e-06 55.5 82 52.4
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.3e-06 55.5 82 47.6
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.3e-06 55.5 82 47.6
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 3.0e-06 55.1 72 48.6
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.9e-06 54.7 81 49.4
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 3.9e-06 54.7 80 50.0
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.1e-06 54.3 77 46.8
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 5.1e-06 54.3 81 48.1
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 5.1e-06 54.3 80 45.0
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 5.1e-06 54.3 74 47.3
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.6e-06 53.9 82 50.0
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 6.6e-06 53.9 82 43.9
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 6.6e-06 53.9 80 45.0
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.6e-06 53.5 82 53.7
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.6e-06 53.5 82 47.6
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 8.6e-06 53.5 81 48.1
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 8.6e-06 53.5 81 45.7


User provided reference genes

Program Settings