Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G051300 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 7.0e-284 979.9 494 100.0
Phvul.011G051100 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 1.2e-264 916.0 493 93.3
VMungo1127G1209 Vigna mungo HOM05D004385 ORTHO05D005245 1.0e-242 843.2 493 85.4
Glyma.12G049000 Glycine max HOM05D004385 ORTHO05D005245 6.4e-229 797.3 487 80.9
Ca_20811_v3 Cicer arietinum L. HOM05D004385 ORTHO05D005245 3.2e-228 795.0 490 80.2
Phvul.011G051400 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 1.6e-227 792.7 487 81.7
VMungo1127G2221 Vigna mungo HOM05D004385 ORTHO05D005245 7.9e-227 790.4 487 80.9
Lj3g0012868 Lotus japonicus HOM05D004385 ORTHO05D005245 3.8e-221 771.5 488 79.5
Medtr4g068230 Medicago truncatula HOM05D004385 ORTHO05D005245 4.9e-221 771.2 487 78.4
TPR.G34256 Trifolium pratense HOM05D004385 ORTHO05D005245 2.5e-220 768.8 487 78.0
Lalb_Chr19g0138471 Lupinus albus HOM05D004385 ORTHO05D005245 5.1e-218 761.1 485 77.3
Medtr4g068240 Medicago truncatula HOM05D004385 ORTHO05D005245 6.3e-216 754.2 487 76.8
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea HOM05D004385 ORTHO05D005245 5.3e-215 751.1 487 75.6
Medtr4g068270 Medicago truncatula HOM05D004385 ORTHO05D005245 6.9e-215 750.7 487 76.4
Psat0s5298g0040 Pisum sativum HOM05D004385 ORTHO05D005245 2.2e-213 745.7 486 75.5
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea HOM05D004385 ORTHO05D005245 8.5e-213 743.8 487 74.7
Dinv26468 Davidia involucrata HOM05D004385 ORTHO05D005245 5.1e-202 708.0 489 70.6
Psat0s8631g0040 Pisum sativum HOM05D004385 ORTHO05D005245 2.0e-201 706.1 488 72.1
Potri.018G138206 Populus trichocarpa HOM05D004385 ORTHO05D005245 2.0e-201 706.1 490 70.6
TPR.G10229 Trifolium pratense HOM05D004385 ORTHO05D005245 1.0e-197 693.7 584 62.7
RcHm_v2.0_Chr4g0397951 Rosa chinensis HOM05D004385 ORTHO05D005245 1.4e-196 689.9 492 69.7
Cpa.g.sc123.33 Carica papaya HOM05D004385 ORTHO05D005245 1.9e-196 689.5 490 69.6
Manes.03G078300 Manihot esculenta HOM05D004385 ORTHO05D005245 1.9e-196 689.5 490 69.6
Prupe.1G065500 Prunus persica HOM05D004385 ORTHO05D005245 1.9e-196 689.5 490 69.6
Haze_19053 Corylus avellana HOM05D004385 ORTHO05D005245 2.5e-196 689.1 490 70.2
MD16G1239400 Malus domestica HOM05D004385 ORTHO05D005245 2.7e-195 685.6 493 68.6
QL11p009243 Quercus lobata HOM05D004385 ORTHO05D005245 2.7e-195 685.6 490 70.2
FvH4_4g06230 Fragaria vesca HOM05D004385 ORTHO05D005245 5.2e-194 681.4 491 68.6
Thecc.09G194100 Theobroma cacao HOM05D004385 ORTHO05D005245 8.8e-194 680.6 488 68.4
CANSAT80G1931 Cannabis sativa HOM05D004385 ORTHO05D005245 1.5e-193 679.9 493 68.8
Haze_19054 Corylus avellana HOM05D004385 ORTHO05D005245 5.7e-193 677.9 512 67.2
Gohir.D05G001400 Gossypium hirsutum HOM05D004385 ORTHO05D005245 1.7e-192 676.4 492 68.3
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla HOM05D004385 ORTHO05D005245 2.2e-192 676.0 490 67.8
Manes.03G078400 Manihot esculenta HOM05D004385 ORTHO05D005245 6.3e-192 674.5 488 68.6
Gorai.009G001300 Gossypium raimondii HOM05D004385 ORTHO05D005245 1.4e-191 673.3 492 67.9
TAR626G1834 Trochodendron aralioides HOM05D004385 ORTHO05D005245 7.0e-191 671.0 487 68.8
Atru.chr7.972_Atru.chr7.973 Acer truncatum HOM05D004385 ORTHO05D005245 1.2e-190 670.2 488 67.8
Gohir.A05G001100 Gossypium hirsutum HOM05D004385 ORTHO05D005245 2.6e-190 669.1 492 67.5
FAN12G0289 Fragaria x ananassa HOM05D004385 ORTHO05D005245 7.7e-190 667.5 519 65.1
CsaV3_2G035400 Cucumis sativus L. HOM05D004385 ORTHO05D005245 2.9e-189 665.6 490 65.7
ClCG06G014050 Citrullus lanatus HOM05D004385 ORTHO05D005245 6.5e-189 664.5 490 65.7
CANSAT80G0643 Cannabis sativa HOM05D004385 ORTHO05D005245 8.5e-189 664.1 485 67.0
COL.COLO4_24913 Corchorus olitorius HOM05D004385 ORTHO05D005245 1.1e-188 663.7 488 68.0
TWI32G0217 Tripterygium wilfordii HOM05D004385 ORTHO05D005245 1.5e-188 663.3 495 66.3
CSS0002376 Camellia sinensis var. sinensis HOM05D004385 ORTHO05D005245 3.2e-188 662.1 495 66.9
Duzib168G1467 Durio zibethinus HOM05D004385 ORTHO05D005245 3.2e-188 662.1 468 69.4
Rhsim05G0069600 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.8e-186 656.4 495 66.3
Cpa.g.sc123.32 Carica papaya HOM05D004385 ORTHO05D005245 2.6e-185 652.5 507 64.5
Sed0013454 Sechium edule HOM05D004385 ORTHO05D005245 4.4e-185 651.7 483 66.9
Nn1g09800 Nelumbo nucifera HOM05D004385 ORTHO05D005245 1.7e-184 649.8 482 66.6
vmacro22292 Vaccinium macrocarpon HOM05D004385 ORTHO05D005245 2.8e-184 649.0 495 66.1
Eucgr.C02022 Eucalyptus grandis HOM05D004385 ORTHO05D005245 1.0e-181 640.6 483 65.2
MELO3C019214.2 Cucumis melo HOM05D004385 ORTHO05D005245 2.2e-181 639.4 529 60.7
DCAR_023663 Daucus carota HOM05D004385 ORTHO05D005245 2.9e-181 639.0 491 64.2
ClCG06G014070 Citrullus lanatus HOM05D004385 ORTHO05D005245 3.8e-181 638.6 488 63.9
MSTRG.10464 Avicennia marina HOM05D004385 ORTHO05D005245 6.5e-181 637.9 484 65.5
Oeu028831.1 Olea europaea HOM05D004385 ORTHO05D005245 6.5e-181 637.9 486 63.2
AUR62028001 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.5e-180 636.7 490 63.3
Sopen07g005830 Solanum pennellii HOM05D004385 ORTHO05D005245 1.2e-179 633.6 485 64.3
CiPaw.15G156000 Carya illinoinensis HOM05D004385 ORTHO05D005245 2.1e-179 632.9 491 67.0
EL10Ac2g03630 Beta vulgaris HOM05D004385 ORTHO05D005245 4.7e-179 631.7 503 63.2
Sabra18G0119900 Salix brachista HOM05D004385 ORTHO05D005245 1.8e-178 629.8 496 64.9
Sed0010902 Sechium edule HOM05D004385 ORTHO05D005245 2.6e-177 625.9 484 63.2
PGR142G0778 Punica granatum HOM05D004385 ORTHO05D005245 9.8e-177 624.0 484 62.8
MBI11_g07424_MAGBIO Magnolia biondii HOM05D004385 ORTHO05D005245 3.7e-176 622.1 491 62.9
Cc00_g00420 Coffea canephora HOM05D004385 ORTHO05D005245 1.1e-175 620.5 489 64.2
ECA240G2514 Erigeron canadensis HOM05D004385 ORTHO05D005245 2.4e-175 619.4 490 62.0
Migut.B00849 Erythranthe guttata HOM05D004385 ORTHO05D005245 4.1e-175 618.6 478 65.3
HanXRQChr03g0067331 Helianthus annuus HOM05D004385 ORTHO05D005245 1.7e-173 613.2 486 60.9
Cc00_g00450 Coffea canephora HOM05D004385 ORTHO05D005245 1.5e-172 610.1 489 63.0
Sed0010048 Sechium edule HOM05D004385 ORTHO05D005245 3.2e-172 609.0 487 62.4
Sed0018057 Sechium edule HOM05D004385 ORTHO05D005245 4.2e-172 608.6 481 62.6
Lsat_1_v5_gn_7_57600 Lactuca sativa HOM05D004385 ORTHO05D005245 7.2e-172 607.8 486 62.1
Nitab4.5_0001205g0010 Nicotiana tabacum HOM05D004385 ORTHO05D005245 1.4e-170 603.6 488 62.9
Nitab4.5_0000413g0040 Nicotiana tabacum HOM05D004385 ORTHO05D005245 3.0e-170 602.4 490 62.4
Peaxi162Scf00320g00412 Petunia axillaris HOM05D004385 ORTHO05D005245 9.8e-169 597.4 490 62.2
Potri.018G145600 Populus trichocarpa HOM05D004385 ORTHO05D005245 4.9e-168 595.1 417 70.0
HPP92_003174 Vanilla planifolia HOM05D004385 ORTHO05D005245 1.5e-164 583.6 486 59.9
Hund03234 Selenicereus undatus HOM05D004385 ORTHO05D005245 1.9e-164 583.2 490 59.2
EL10Ac2g03633 Beta vulgaris HOM05D004385 ORTHO05D005245 3.3e-164 582.4 489 60.5
SGA_v2.0_scaffold21G09624 Striga asiatica HOM05D004385 ORTHO05D005245 1.0e-162 577.4 482 61.6
HanXRQChr03g0067221 Helianthus annuus HOM05D004385 ORTHO05D005245 4.9e-160 568.5 492 57.9
Peaxi162Scf00320g00411 Petunia axillaris HOM05D004385 ORTHO05D005245 5.4e-159 565.1 493 57.2
HanXRQChr03g0067391 Helianthus annuus HOM05D004385 ORTHO05D005245 7.0e-159 564.7 483 59.2
EL10Ac2g03634 Beta vulgaris HOM05D004385 ORTHO05D005245 9.2e-159 564.3 471 60.5
Solyc07g015980.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.7e-157 560.1 491 58.2
ECA240G4307 Erigeron canadensis HOM05D004385 ORTHO05D005245 3.9e-157 558.9 495 56.0
AUR62020716 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.3e-156 555.8 490 58.4
AUR62028000 Chenopodium quinoa HOM05D004385 ORTHO05D005245 9.5e-156 554.3 494 58.3
AUR62028006 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.2e-155 553.9 490 59.0
ATR1147G022 Amborella trichopoda HOM05D004385 ORTHO05D005245 8.0e-155 551.2 494 55.9
EL10Ac2g03631 Beta vulgaris HOM05D004385 ORTHO05D005245 1.7e-152 543.5 485 56.3
RhsimUnG0051500 Rhododendron simsii HOM05D004385 ORTHO05D005245 4.1e-151 538.9 497 58.6
Cpa.g.sc123.30 Carica papaya HOM05D004385 ORTHO05D005245 7.8e-150 534.6 488 57.4
Migut.L01912 Erythranthe guttata HOM05D004385 ORTHO05D005245 2.8e-147 526.2 384 67.7
EL10Ac2g03632 Beta vulgaris HOM05D004385 ORTHO05D005245 3.1e-146 522.7 492 55.9
Peaxi162Scf00320g00316 Petunia axillaris HOM05D004385 ORTHO05D005245 3.1e-146 522.7 488 55.9
SEGI_12293 Sequoiadendron giganteum HOM05D004385 ORTHO05D005245 3.4e-145 519.2 496 53.2
AUR62027997 Chenopodium quinoa HOM05D004385 ORTHO05D005245 9.9e-145 517.7 495 54.1
CDE06G1948 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 6.4e-144 515.0 454 56.8
Ah.11g043620 Amaranthus hybridus HOM05D004385 ORTHO05D005245 1.6e-139 500.4 477 55.1
TPR.G34194 Trifolium pratense HOM05D004385 ORTHO05D005245 4.7e-139 498.8 322 75.5
Ah.11g043630 Amaranthus hybridus HOM05D004385 ORTHO05D005245 8.1e-139 498.0 490 53.7
Rhsim01G0218300 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.4e-138 497.3 355 70.1
Atru.chr9.1512 Acer truncatum HOM05D004385 ORTHO05D005245 4.0e-138 495.7 500 56.6
Peaxi162Scf00320g00317 Petunia axillaris HOM05D004385 ORTHO05D005245 5.2e-138 495.4 496 52.2
Sc06g0001470 Simmondsia chinensis HOM05D004385 ORTHO05D005245 2.6e-137 493.0 391 61.1
EL10Ac2g04866 Beta vulgaris HOM05D004385 ORTHO05D005245 4.4e-137 492.3 493 52.5
EL10Ac2g04868 Beta vulgaris HOM05D004385 ORTHO05D005245 9.2e-135 484.6 487 52.8
Cpa.g.sc123.31 Carica papaya HOM05D004385 ORTHO05D005245 2.7e-134 483.0 452 57.7
Rhsim03G0268600 Rhododendron simsii HOM05D004385 ORTHO05D005245 6.9e-130 468.4 489 53.0
Mapoly0055s0075 Marchantia polymorpha HOM05D004385 ORTHO05D005245 9.0e-130 468.0 502 47.2
Pp3c15_21680 Physcomitrium patens HOM05D004385 ORTHO05D005245 6.4e-128 461.8 496 47.0
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05D004385 ORTHO05D005245 1.7e-125 453.8 508 46.5
Cfa020737 Carpinus fangiana HOM05D004385 ORTHO05D005245 3.0e-125 453.0 328 68.6
SGA_v2.0_scaffold21G09621 Striga asiatica HOM05D004385 ORTHO05D005245 1.1e-124 451.1 423 52.0
Zm00001eb064440 Zea mays HOM05D004385 ORTHO05D005245 1.6e-123 447.2 391 56.0
Haze_18802 Corylus avellana HOM05D004385 ORTHO05D005245 1.1e-119 434.5 391 60.4
PGSC0003DMG400021019 Solanum tuberosum HOM05D004385 ORTHO05D005245 9.0e-114 414.8 342 61.4
FAN17G2530 Fragaria x ananassa HOM05D004385 ORTHO05D005245 5.8e-113 412.1 337 63.2
CAN.G1581.3 Capsicum annuum HOM05D004385 ORTHO05D005245 2.4e-111 406.8 330 61.5
PGSC0003DMG400022081 Solanum tuberosum HOM05D004385 ORTHO05D005245 2.1e-110 403.7 456 47.6
TAR626G1477 Trochodendron aralioides HOM05D004385 ORTHO05D005245 1.3e-109 401.0 296 67.9
unitig_578.g16395 Utricularia gibba HOM05D004385 ORTHO05D005245 7.4e-108 395.2 332 59.3
Atru.chr9.1488 Acer truncatum HOM05D004385 ORTHO05D005245 3.4e-105 386.3 411 52.3
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 9.3e-103 378.3 641 35.6
Solyc07g016050.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 7.9e-102 375.2 340 53.5
Aqoxy2G04068 Aquilegia oxysepala HOM05D004385 ORTHO05D005245 1.3e-99 367.9 452 48.0
CsaV3_1G004600 Cucumis sativus L. HOM05D004385 ORTHO05D005245 4.2e-95 352.8 245 69.4
CDE06G1657 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 8.5e-80 302.0 454 41.4
Solyc07g016080.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.8e-77 294.3 278 51.1
Migut.L00572 Erythranthe guttata HOM05D004385 ORTHO05D005245 5.2e-77 292.7 231 58.0
Migut.L00391 Erythranthe guttata HOM05D004385 ORTHO05D005245 5.9e-73 279.3 222 56.8
Cre02.g105150 Chlamydomonas reinhardtii HOM05D004385 ORTHO05D005245 1.5e-68 264.6 604 32.8
Solyc07g016030.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 3.3e-68 263.5 345 43.2
EL10Ac6g13794 Beta vulgaris HOM05D004385 ORTHO05D005245 3.5e-65 253.4 257 52.5
PRCOL_00000420 Prasinoderma coloniale HOM05D004385 ORTHO05D005245 8.8e-61 238.8 478 34.3
Psat1g029120 Pisum sativum HOM05D000870 ORTHO05D000715 1.2e-60 238.4 148 75.7
FAN07G2444 Fragaria x ananassa HOM05D004385 ORTHO05D005245 5.9e-57 226.1 151 72.2
FAN22G1494 Fragaria x ananassa HOM05D004385 ORTHO05D005245 7.7e-57 225.7 151 72.2
MELO3C017386.2 Cucumis melo HOM05D004385 ORTHO05D005245 1.7e-56 224.6 176 63.1
CAN.G1581.2 Capsicum annuum HOM05D004385 ORTHO05D005245 2.9e-56 223.8 149 71.1
SalBow5G2207 Salvia bowleyana HOM05D004385 ORTHO05D005245 5.2e-53 213.0 146 69.2
AUR62020718 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.4e-52 210.3 192 50.0
Sopen07g016620 Solanum pennellii HOM05D004385 ORTHO05D005245 1.3e-51 208.4 146 67.8
unitig_578.g16396 Utricularia gibba HOM05D004385 ORTHO05D005245 2.8e-46 190.7 125 72.8
Sopen00g013700 Solanum pennellii HOM05D004385 ORTHO05D005245 7.5e-44 182.6 148 61.5
Sopen07g016630 Solanum pennellii HOM05D004385 ORTHO05D005245 1.7e-40 171.4 189 49.7
AUR62028003 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.9e-40 170.2 197 49.2
Solyc07g016020.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 9.5e-39 165.6 148 58.1
AUR62028004 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.3e-37 161.0 128 60.2
AUR62020720 Chenopodium quinoa HOM05D004385 ORTHO05D005245 6.8e-37 159.5 169 46.7
Psat0s3373g0120 Pisum sativum HOM05D000870 ORTHO05D005245 1.9e-34 151.4 148 53.4
Solyc07g016040.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 3.9e-32 143.7 118 61.9
Solyc07g032590.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 3.9e-32 143.7 143 53.1
AUR62020721 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.9e-26 124.8 105 58.1
PGSC0003DMG400007349 Solanum tuberosum HOM05D004385 ORTHO05D005245 2.5e-23 114.4 74 68.9
Medtr5g096240 Medicago truncatula HOM05D004385 ORTHO05D005245 1.1e-18 99.0 74 67.6
AUR62027998 Chenopodium quinoa HOM05D004385 ORTHO05D005245 9.2e-18 95.9 107 42.1
Medtr4g117010 Medicago truncatula HOM05D004385 ORTHO05D005245 1.0e-16 92.4 74 64.9
GSVIVG01026776001 Vitis vinifera HOM05D004385 ORTHO05D005245 5.1e-16 90.1 66 57.6
Oeu000968.1 Olea europaea HOM05D004385 ORTHO05D005245 1.3e-06 58.9 56 50.0


User provided reference genes

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