Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 0.0e+00 1118.6 567 100.0
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 5.4e-296 1020.4 566 91.5
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 3.0e-286 988.0 565 88.1
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 8.9e-267 923.3 569 82.1
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 2.1e-260 902.1 570 81.2
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 1.1e-259 899.8 570 81.1
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 6.4e-257 890.6 568 79.8
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 1.6e-255 885.9 568 79.0
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 1.3e-252 876.3 559 79.8
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 1.6e-247 859.4 548 79.9
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 7.9e-247 857.1 558 77.8
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 7.4e-245 850.5 562 78.1
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 2.4e-235 818.9 567 72.0
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 1.5e-234 816.2 557 73.1
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 1.0e-233 813.5 560 71.6
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 4.9e-233 811.2 570 72.6
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 2.1e-231 805.8 557 72.5
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 4.6e-231 804.7 554 72.4
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 6.0e-231 804.3 574 69.2
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 7.9e-231 803.9 557 72.0
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 7.9e-231 803.9 572 69.8
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 3.0e-230 802.0 573 71.0
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 3.3e-229 798.5 557 71.1
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 9.7e-229 797.0 557 71.1
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 1.4e-227 793.1 546 73.1
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 3.1e-227 792.0 554 69.9
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 1.2e-226 790.0 554 70.2
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 1.5e-226 789.6 552 70.3
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 1.7e-225 786.2 560 70.0
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 1.7e-225 786.2 521 74.9
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 1.4e-222 776.5 545 70.1
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 2.3e-222 775.8 540 71.3
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 5.1e-222 774.6 567 68.6
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 5.1e-222 774.6 561 70.2
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 6.7e-222 774.2 575 67.3
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.1e-221 773.5 566 69.3
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.7e-220 769.6 566 69.1
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 2.2e-220 769.2 580 68.3
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 2.8e-220 768.8 516 73.3
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 3.7e-220 768.5 555 69.2
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 1.1e-219 766.9 568 68.8
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 2.4e-219 765.8 555 70.6
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 5.3e-219 764.6 568 69.2
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 2.0e-218 762.7 530 71.3
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 5.0e-217 758.1 555 68.3
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 3.2e-216 755.4 567 67.5
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 4.2e-216 755.0 558 69.9
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.7e-215 752.3 539 69.6
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 7.9e-215 750.7 535 69.7
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 1.0e-214 750.4 558 68.6
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 1.0e-214 750.4 554 69.3
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 6.7e-214 747.7 544 68.8
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 6.7e-214 747.7 537 70.0
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 8.8e-214 747.3 535 69.3
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 8.8e-214 747.3 525 70.1
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 5.7e-213 744.6 552 68.3
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 7.4e-213 744.2 561 67.7
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 7.4e-213 744.2 537 69.5
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 3.7e-212 741.9 527 70.4
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 8.2e-212 740.7 463 78.0
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 1.1e-211 740.3 550 68.0
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 1.1e-211 740.3 561 66.0
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.8e-211 739.6 533 69.6
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 2.4e-211 739.2 525 69.7
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 2.6e-210 735.7 547 68.7
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 3.5e-210 735.3 537 68.3
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 4.5e-210 734.9 531 68.0
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 7.7e-210 734.2 557 68.2
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 2.2e-209 732.6 544 67.6
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 3.8e-209 731.9 538 68.0
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 5.0e-209 731.5 538 68.8
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 6.5e-209 731.1 538 68.2
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 8.5e-209 730.7 528 69.1
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 8.5e-209 730.7 517 71.6
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 1.1e-208 730.3 511 70.1
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 1.9e-208 729.6 538 68.0
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 1.9e-208 729.6 555 67.2
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 5.5e-208 728.0 538 68.4
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 1.6e-207 726.5 515 70.1
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 8.0e-207 724.2 551 67.2
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 5.2e-206 721.5 580 64.5
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 6.7e-206 721.1 558 65.2
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 6.7e-206 721.1 647 60.0
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 4.8e-204 714.9 482 73.7
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 8.2e-204 714.1 507 70.4
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 7.0e-203 711.1 513 69.2
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 9.1e-203 710.7 508 68.5
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.2e-202 710.3 535 67.7
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 3.5e-202 708.8 424 79.5
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 4.5e-202 708.4 509 69.2
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.0e-201 707.2 445 76.2
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 1.3e-201 706.8 424 78.5
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 3.8e-201 705.3 514 69.5
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 2.5e-200 702.6 439 76.5
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 2.7e-199 699.1 524 67.6
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 6.3e-196 688.0 563 64.7
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 1.0e-185 654.1 562 63.2
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 8.0e-183 644.4 372 82.3
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 7.0e-179 631.3 519 62.0
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 1.1e-176 624.0 437 70.3
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.1e-163 580.9 386 75.4
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 1.2e-154 550.8 503 55.7
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 1.0e-153 547.7 403 69.0
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 3.9e-153 545.8 412 68.0
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 3.9e-153 545.8 528 53.4
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 3.6e-143 512.7 435 57.2
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 2.2e-140 503.4 441 55.8
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 8.7e-121 438.3 492 47.4
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 3.7e-111 406.4 520 46.9
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 1.2e-109 401.4 523 46.5
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 2.6e-109 400.2 572 42.1
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 2.1e-106 390.6 451 49.2
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 2.1e-106 390.6 450 49.3
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 2.2e-103 380.6 477 44.4
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 5.3e-102 375.9 520 44.8
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.1e-99 368.2 545 44.6
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 2.5e-99 367.1 255 71.0
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 5.9e-93 345.9 560 42.1
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 5.0e-84 316.2 169 93.5
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 1.8e-81 307.8 176 82.4
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 3.4e-80 303.5 480 37.7
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 8.9e-57 225.7 162 74.1
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 2.8e-50 204.1 206 55.8
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 7.1e-38 162.9 138 60.1
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.5e-35 154.5 131 59.5
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.2e-32 145.6 86 82.6
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 7.1e-30 136.3 105 65.7
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 9.0e-25 119.4 125 49.6
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 1.0e-20 105.9 104 56.7
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.4e-17 94.7 58 74.1
QL11p041915 Quercus lobata HOM05D005713 ORTHO05D021118 1.1e-11 75.9 132 42.4
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 2.4e-09 68.2 142 33.1
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 5.8e-08 63.5 130 37.7
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 7.6e-08 63.2 114 37.7
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 7.6e-08 63.2 142 31.7
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 1.3e-07 62.4 38 76.3


User provided reference genes

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