Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G043800 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 3.8e-34 147.5 71 100.0
Glyma.10G067600 Glycine max HOM05D009866 ORTHO05D010704 5.6e-17 90.5 61 72.1
Medtr5g086360 Medicago truncatula HOM05D009866 ORTHO05D010704 2.1e-16 88.6 62 71.0
Phvul.008G097400 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 1.2e-14 82.8 60 68.3
Phvul.011G146200 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 7.1e-12 73.6 60 63.3
Medtr5g089380 Medicago truncatula HOM05D009866 ORTHO05D010704 2.1e-11 72.0 61 62.3
Phvul.011G146500 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 6.0e-11 70.5 62 56.5
Phvul.011G190800 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 6.0e-11 70.5 57 63.2
EL10Ac7g16461 Beta vulgaris HOM05D009866 ORTHO05D010704 7.8e-11 70.1 51 68.6
Phvul.011G146300 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 1.0e-10 69.7 54 66.7
arahy.Tifrunner.gnm1.ann1.L3EAWL Arachis hypogaea HOM05D009866 ORTHO05D010704 3.9e-10 67.8 59 59.3
arahy.Tifrunner.gnm1.ann1.Y2I1N6 Arachis hypogaea HOM05D009866 ORTHO05D010704 3.9e-10 67.8 59 59.3
VMungo1383G1177 Vigna mungo HOM05D009866 ORTHO05D010704 5.6e-09 63.9 51 64.7
AL1G57100 Arabidopsis lyrata HOM05D009866 ORTHO05D010704 9.5e-09 63.2 57 54.4
Potri.018G115200 Populus trichocarpa HOM05D009866 ORTHO05D010704 1.6e-08 62.4 61 49.2
Phvul.005G154200 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 2.1e-08 62.0 59 55.9
Psat7g064440 Pisum sativum HOM05D009866 ORTHO05D010704 2.8e-08 61.6 62 51.6
Phvul.011G190750 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 3.6e-08 61.2 47 63.8
Thecc.04G289000 Theobroma cacao HOM05D009866 ORTHO05D010704 3.6e-08 61.2 55 58.2
Gohir.A03G019950 Gossypium hirsutum HOM05D009866 ORTHO05D010704 4.7e-08 60.8 65 50.8
Carub.0001s3890 Capsella rubella HOM05D010163 ORTHO05D010704 1.1e-07 59.7 60 51.7
Carub.0004s2361 Capsella rubella HOM05D009866 ORTHO05D010704 3.1e-07 58.2 48 66.7
Potri.005G020350 Populus trichocarpa HOM05D009866 ORTHO05D010704 3.1e-07 58.2 61 47.5
Phvul.003G237700 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 2.6e-06 55.1 48 56.2
Phvul.011G146600 Phaseolus vulgaris HOM05D009866 ORTHO05D010704 4.4e-06 54.3 47 59.6
Gohir.A11G030251 Gossypium hirsutum HOM05D010163 ORTHO05D010704 5.8e-06 53.9 57 47.4
Carub.0001s4006 Capsella rubella HOM05D010163 ORTHO05D010704 7.6e-06 53.5 58 46.6


User provided reference genes

Program Settings