Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G041800 Phaseolus vulgaris HOM05D005646 ORTHO05D006828 5.0e-185 651.0 332 100.0
VMungo1127G2196 Vigna mungo HOM05D005646 ORTHO05D006828 6.2e-159 564.3 329 88.1
Glyma.11G113800 Glycine max HOM05D005646 ORTHO05D006828 3.5e-122 442.2 335 73.4
Ca_20909_v3 Cicer arietinum L. HOM05D005646 ORTHO05D006828 3.0e-113 412.5 332 70.2
Lj3g0019487 Lotus japonicus HOM05D005646 ORTHO05D006828 1.1e-104 384.0 342 64.3
TPR.G30507 Trifolium pratense HOM05D005646 ORTHO05D006828 8.5e-100 367.9 288 68.4
Psat7g183120 Pisum sativum HOM05D005646 ORTHO05D006828 4.2e-99 365.5 328 64.0
QL04p013757 Quercus lobata HOM05D005646 ORTHO05D006828 3.1e-94 349.4 355 54.9
Medtr4g071010 Medicago truncatula HOM05D005646 ORTHO05D006828 5.0e-92 342.0 326 61.3
arahy.Tifrunner.gnm1.ann1.HJ7TPY Arachis hypogaea HOM05D005646 ORTHO05D006828 9.4e-91 337.8 324 59.9
CiPaw.13G011000 Carya illinoinensis HOM05D005646 ORTHO05D006828 1.6e-90 337.0 358 54.7
arahy.Tifrunner.gnm1.ann1.2P0PPD Arachis hypogaea HOM05D005646 ORTHO05D006828 3.6e-90 335.9 324 60.2
Haze_03084 Corylus avellana HOM05D005646 ORTHO05D006828 8.8e-89 331.3 351 55.6
Prupe.2G029800 Prunus persica HOM05D005646 ORTHO05D006828 3.8e-84 315.8 350 53.1
Thecc.10G006200 Theobroma cacao HOM05D005646 ORTHO05D006828 1.9e-83 313.5 346 51.4
Lalb_Chr03g0025471 Lupinus albus HOM05D005646 ORTHO05D006828 1.4e-81 307.4 335 56.1
PGR142G3067 Punica granatum HOM05D005646 ORTHO05D006828 5.2e-81 305.4 345 51.3
GSVIVG01000839001 Vitis vinifera HOM05D005646 ORTHO05D006828 6.7e-81 305.1 295 56.3
Dinv31492 Davidia involucrata HOM05D005646 ORTHO05D006828 1.2e-80 304.3 337 51.9
Gorai.011G293500 Gossypium raimondii HOM05D005646 ORTHO05D006828 1.5e-80 303.9 331 51.4
Duzib128G0351 Durio zibethinus HOM05D005646 ORTHO05D006828 3.3e-80 302.8 322 53.7
CsaV3_5G024710 Cucumis sativus L. HOM05D005646 ORTHO05D006828 2.8e-79 299.7 327 54.4
TAR053G0001 Trochodendron aralioides HOM05D005646 ORTHO05D006828 4.8e-79 298.9 305 56.4
Hma1.2p1_0902F.1_g234850 Hydrangea macrophylla HOM05D005646 ORTHO05D006828 2.4e-78 296.6 393 47.3
Gohir.D10G253200 Gossypium hirsutum HOM05D005646 ORTHO05D006828 4.1e-78 295.8 331 50.5
MD02G1293900 Malus domestica HOM05D005646 ORTHO05D006828 4.1e-78 295.8 363 50.4
Manes.11G002900 Manihot esculenta HOM05D005646 ORTHO05D006828 1.6e-77 293.9 282 56.7
Gohir.A10G241000 Gossypium hirsutum HOM05D005646 ORTHO05D006828 2.7e-77 293.1 331 51.1
Cpa.g.sc197.4 Carica papaya HOM05D005646 ORTHO05D006828 7.7e-77 291.6 296 54.4
Dinv32048 Davidia involucrata HOM05D005646 ORTHO05D006828 8.5e-76 288.1 348 49.1
MELO3C005130.2 Cucumis melo HOM05D005646 ORTHO05D006828 7.2e-75 285.0 326 53.1
ClCG01G007660 Citrullus lanatus HOM05D005646 ORTHO05D006828 9.4e-75 284.6 324 52.8
Atru.chr11.2464 Acer truncatum HOM05D005646 ORTHO05D006828 1.0e-73 281.2 336 49.4
Eucgr.J01194 Eucalyptus grandis HOM05D005646 ORTHO05D006828 1.5e-72 277.3 291 54.3
Cc02_g29140 Coffea canephora HOM05D005646 ORTHO05D006828 2.0e-72 276.9 365 45.8
CSS0034883 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 4.4e-72 275.8 348 48.0
Sed0017230 Sechium edule HOM05D005646 ORTHO05D006828 7.5e-72 275.0 340 49.7
CSS0050243 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 3.7e-71 272.7 349 47.9
DCAR_022352 Daucus carota HOM05D005646 ORTHO05D006828 1.1e-70 271.2 337 50.7
SalBow5G2332 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.1e-70 271.2 282 53.5
MSTRG.20533 Avicennia marina HOM05D005646 ORTHO05D006828 1.8e-70 270.4 415 44.3
TWI63G1320 Tripterygium wilfordii HOM05D005646 ORTHO05D006828 9.1e-70 268.1 290 51.0
CDE08G1053 Ceratophyllum demersum HOM05D005646 ORTHO05D006828 2.0e-69 266.9 293 52.2
Nn7g36491 Nelumbo nucifera HOM05D005646 ORTHO05D006828 2.0e-69 266.9 355 47.0
THA.LOC104824183 Tarenaya hassleriana HOM05D005646 ORTHO05D006828 2.0e-69 266.9 334 49.1
Potri.001G024200 Populus trichocarpa HOM05D005646 ORTHO05D006828 4.5e-69 265.8 334 47.3
Aqoxy1G00222 Aquilegia oxysepala HOM05D005646 ORTHO05D006828 2.3e-68 263.5 242 59.5
Sabra01G0018200 Salix brachista HOM05D005646 ORTHO05D000112 2.9e-68 263.1 335 47.2
MBI19_g40603_MAGBIO Magnolia biondii HOM05D005646 ORTHO05D006828 3.8e-68 262.7 292 51.7
Atru.chr11.2492 Acer truncatum HOM05D005646 ORTHO05D006828 1.5e-67 260.8 367 44.7
CANSAT54G2531 Cannabis sativa HOM05D005646 ORTHO05D006828 4.2e-67 259.2 338 47.3
Hund13332 Selenicereus undatus HOM05D005646 ORTHO05D006828 9.5e-67 258.1 439 40.5
ATR0217G018 Amborella trichopoda HOM05D005646 ORTHO05D006828 6.1e-66 255.4 341 47.8
Migut.B01206 Erythranthe guttata HOM05D005646 ORTHO05D006828 8.0e-66 255.0 339 46.3
FvH4_5g29000 Fragaria vesca HOM05D005646 ORTHO05D006828 3.0e-65 253.1 332 48.8
Ciclev10031582m.g Citrus clementina HOM05D005646 ORTHO05D006828 8.9e-65 251.5 356 46.1
ECA234G1046 Erigeron canadensis HOM05D005646 ORTHO05D006828 1.2e-64 251.1 273 50.5
FAN18G3275 Fragaria x ananassa HOM05D005646 ORTHO05D006828 2.0e-64 250.4 332 48.8
HanXRQChr16g0525351 Helianthus annuus HOM05D005646 ORTHO05D006828 2.6e-64 250.0 272 53.7
Sc17g0003830 Simmondsia chinensis HOM05D005646 ORTHO05D006828 2.6e-64 250.0 336 45.2
FAN13G1025 Fragaria x ananassa HOM05D005646 ORTHO05D006828 3.4e-64 249.6 233 59.7
RcHm_v2.0_Chr7g0221681 Rosa chinensis HOM05D005646 ORTHO05D006828 4.4e-64 249.2 229 61.1
COL.COLO4_33459 Corchorus olitorius HOM05D005646 ORTHO05D006828 1.3e-63 247.7 277 50.5
Carub.0004s2080 Capsella rubella HOM05D005646 ORTHO05D006828 2.2e-63 246.9 332 46.4
Lj9A646T48 Lonicera japonica HOM05D005646 ORTHO05D006828 2.8e-63 246.5 225 58.2
Lsat_1_v5_gn_4_30541 Lactuca sativa HOM05D005646 ORTHO05D006828 3.7e-63 246.1 290 49.7
Ah.10g030810 Amaranthus hybridus HOM05D005646 ORTHO05D006828 1.8e-62 243.8 436 38.5
CAN.G1571.4 Capsicum annuum HOM05D005646 ORTHO05D006828 1.8e-62 243.8 286 51.4
FAN08G2254 Fragaria x ananassa HOM05D005646 ORTHO05D006828 2.4e-62 243.4 332 48.2
AUR62032557 Chenopodium quinoa HOM05D005646 ORTHO05D006828 3.1e-62 243.0 450 36.2
AUR62031673 Chenopodium quinoa HOM05D005646 ORTHO05D006828 2.0e-61 240.4 457 36.1
Nitab4.5_0000316g0120 Nicotiana tabacum HOM05D005646 ORTHO05D006828 2.0e-61 240.4 288 49.3
Peaxi162Scf00309g00328 Petunia axillaris HOM05D005646 ORTHO05D006828 3.5e-61 239.6 305 47.2
Solyc01g068470.4 Solanum lycopersicum HOM05D005646 ORTHO05D006828 1.7e-60 237.3 295 47.5
Sp4g21170 Schrenkiella parvula HOM05D005646 ORTHO05D006828 3.8e-60 236.1 334 45.8
Nitab4.5_0013777g0020 Nicotiana tabacum HOM05D005646 ORTHO05D006828 5.0e-60 235.7 286 48.6
Glyma.12G039732 Glycine max HOM05D005646 ORTHO05D006828 8.6e-60 235.0 186 71.5
C03p25580 Brassica napus HOM05D005646 ORTHO05D006828 1.5e-59 234.2 284 49.6
BraA03t11395Z Brassica rapa HOM05D005646 ORTHO05D006828 1.5e-59 234.2 332 45.5
SGA_v2.0_scaffold249G44948 Striga asiatica HOM05D005646 ORTHO05D006828 1.9e-59 233.8 401 42.6
PSO063G6839 Papaver somniferum HOM05D005646 ORTHO05D006828 7.3e-59 231.9 277 46.9
A03p21590 Brassica napus HOM05D005646 ORTHO05D006828 1.6e-58 230.7 332 44.6
Thhalv10016593m.g Eutrema salsugineum HOM05D005646 ORTHO05D006828 2.1e-58 230.3 341 44.3
EL10Ac2g02850 Beta vulgaris HOM05D005646 ORTHO05D006828 6.1e-58 228.8 459 34.9
unitig_746.g26627 Utricularia gibba HOM05D005646 ORTHO05D006828 1.0e-57 228.0 353 42.5
Sopen01g030430 Solanum pennellii HOM05D005646 ORTHO05D006828 1.8e-57 227.3 322 43.8
AL4G36080 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 2.3e-57 226.9 332 45.5
Aa31LG5G20900 Aethionema arabicum HOM05D005646 ORTHO05D006828 3.0e-57 226.5 299 46.8
BolC3t14946H Brassica oleracea HOM05D005646 ORTHO05D006828 3.0e-57 226.5 332 44.3
AT2G38780 Arabidopsis thaliana HOM05D005646 ORTHO05D006828 5.2e-57 225.7 334 43.7
SalBow5G2661 Salvia bowleyana HOM05D005646 ORTHO05D006828 4.4e-56 222.6 282 48.2
CARHR133490 Cardamine hirsuta HOM05D005646 ORTHO05D006828 9.8e-56 221.5 290 46.9
PSO341G0002 Papaver somniferum HOM05D005646 ORTHO05D006828 1.3e-52 211.1 177 58.2
Actinidia19445 Actinidia chinensis HOM05D005646 ORTHO05D006828 5.0e-52 209.1 203 53.2
Glyma.18G124100 Glycine max HOM05D005646 ORTHO05D006828 2.1e-50 203.8 124 83.1
SEGI_25656 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 1.2e-48 198.0 304 42.4
Zm00001eb347150 Zea mays HOM05D005646 ORTHO05D006828 2.1e-45 187.2 308 37.7
HPP92_001013 Vanilla planifolia HOM05D005646 ORTHO05D006828 3.5e-45 186.4 290 40.3
RcHm_v2.0_Chr2g0113191 Rosa chinensis HOM05D005646 ORTHO05D006828 1.1e-43 181.4 240 48.3
Rhsim07G0062900 Rhododendron simsii HOM05D005646 ORTHO05D006828 3.1e-41 173.3 135 62.2
RcHm_v2.0_Chr4g0400611 Rosa chinensis HOM05D005646 ORTHO05D006828 4.0e-41 172.9 166 58.4
GSVIVG01000664001 Vitis vinifera HOM05D005646 ORTHO05D006828 4.4e-40 169.5 152 59.9
SMO145G0178 Selaginella moellendorffii HOM05D005646 ORTHO05D006828 5.8e-40 169.1 172 50.6
Mapoly0066s0082 Marchantia polymorpha HOM05D005646 ORTHO05D006828 4.1e-38 162.9 178 48.9
AagrBONN_evm.TU.Sc2ySwM_228.261 Anthoceros agrestis HOM05D005646 ORTHO05D006828 1.6e-37 161.0 253 41.5
vmacro13731 Vaccinium macrocarpon HOM05D005646 ORTHO05D006828 1.0e-36 158.3 137 59.1
Pp3c21_7940 Physcomitrium patens HOM05D005646 ORTHO05D006828 8.6e-36 155.2 171 50.3
Sc15g0003140 Simmondsia chinensis HOM05D005646 ORTHO05D006828 8.9e-33 145.2 163 47.2
RcHm_v2.0_Chr2g0154951 Rosa chinensis HOM05D005646 ORTHO05D006828 9.9e-32 141.7 150 54.7
CBR_g29393 Chara braunii HOM05D005646 ORTHO05D006828 2.2e-23 114.0 134 44.8
PGSC0003DMG400000847 Solanum tuberosum HOM05D005646 ORTHO05D006828 8.4e-23 112.1 112 53.6
RcHm_v2.0_Chr4g0400621 Rosa chinensis HOM05D005646 ORTHO05D006828 2.4e-22 110.5 88 63.6
AL4G20430 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 1.3e-18 98.2 151 38.4
Cre13.g607900 Chlamydomonas reinhardtii HOM05D005646 ORTHO05D006828 2.1e-18 97.4 100 46.0
CARHR125840 Cardamine hirsuta HOM05D005646 ORTHO05D006828 2.4e-14 84.0 113 44.2
Os05g0381500 Oryza sativa ssp. japonica HOM05D005646 ORTHO05D006828 5.4e-14 82.8 82 50.0
COL.COLO4_25675 Corchorus olitorius HOM05D005646 ORTHO05D006828 1.6e-13 81.3 64 56.2
MCO02G103 Micromonas commoda HOM05D005646 ORTHO05D006828 6.0e-13 79.3 96 42.7
PRCOL_00006924 Prasinoderma coloniale HOM05D005646 ORTHO05D006828 8.7e-12 75.5 115 39.1
RcHm_v2.0_Chr1g0326961 Rosa chinensis HOM05D005646 ORTHO05D006828 4.8e-10 69.7 54 64.8
RcHm_v2.0_Chr4g0400631 Rosa chinensis HOM05D005646 ORTHO05D006828 4.5e-08 63.2 45 68.9
arahy.Tifrunner.gnm1.ann1.7I4JN8 Arachis hypogaea HOM05D005646 ORTHO05D006828 7.6e-08 62.4 42 71.4
Zm00001eb138540 Zea mays HOM05D005646 ORTHO05D006828 1.9e-06 57.8 95 40.0


User provided reference genes

Program Settings