Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 1.0e-129 466.8 254 100.0
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 6.9e-110 401.0 250 86.4
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 6.5e-92 341.3 259 74.5
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 3.6e-66 255.8 289 58.5
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 5.2e-65 251.9 282 57.4
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 2.0e-64 250.0 283 56.5
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 9.2e-62 241.1 282 55.7
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.6e-61 240.4 273 54.2
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 2.0e-61 240.0 277 58.8
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 1.8e-57 226.9 285 53.7
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 5.7e-56 221.9 296 52.7
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 1.2e-45 187.6 252 50.4
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.7e-44 183.7 264 47.0
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 6.6e-44 181.8 238 50.4
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 8.6e-44 181.4 151 65.6
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 4.3e-43 179.1 127 71.7
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 8.1e-42 174.9 211 50.7
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 1.4e-41 174.1 150 63.3
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 2.3e-41 173.3 177 55.9
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 6.8e-41 171.8 237 47.7
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 6.8e-41 171.8 264 44.3
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 1.2e-40 171.0 150 62.0
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.2e-40 171.0 233 49.8
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 2.0e-40 170.2 209 48.8
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 2.6e-40 169.9 176 55.1
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 3.4e-40 169.5 172 56.4
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 3.4e-40 169.5 274 46.4
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.4e-40 169.1 232 48.7
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 4.4e-40 169.1 257 45.5
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 5.8e-40 168.7 281 45.2
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 9.8e-40 167.9 185 52.4
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 9.8e-40 167.9 266 45.5
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 1.3e-39 167.5 136 65.4
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.7e-39 167.2 253 47.0
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.2e-39 166.8 172 56.4
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 2.2e-39 166.8 144 65.3
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 2.9e-39 166.4 242 47.1
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 4.9e-39 165.6 232 47.0
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 8.3e-39 164.9 247 49.0
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.1e-38 164.5 250 48.0
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-38 164.1 253 46.6
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-38 164.1 234 49.1
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.4e-38 163.3 207 49.3
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 2.4e-38 163.3 242 45.5
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 2.4e-38 163.3 199 52.3
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 4.1e-38 162.5 249 44.6
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 4.1e-38 162.5 143 62.2
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 5.4e-38 162.2 130 63.1
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 5.4e-38 162.2 216 48.1
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 7.1e-38 161.8 139 62.6
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 9.2e-38 161.4 255 45.5
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 1.2e-37 161.0 248 47.6
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.2e-37 161.0 229 48.9
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 1.6e-37 160.6 141 62.4
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.6e-37 160.6 151 60.9
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 2.1e-37 160.2 260 44.2
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.1e-37 160.2 229 49.8
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 3.5e-37 159.5 253 43.1
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 4.6e-37 159.1 253 44.3
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 4.6e-37 159.1 231 45.0
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 7.8e-37 158.3 178 52.2
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 2.3e-36 156.8 272 42.3
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 2.3e-36 156.8 157 54.1
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 8.6e-36 154.8 107 73.8
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 1.1e-35 154.5 232 45.3
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.1e-35 154.5 201 49.3
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 1.5e-35 154.1 148 62.8
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 1.9e-35 153.7 283 41.3
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.9e-35 153.7 180 50.6
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 3.3e-35 152.9 180 51.7
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 3.3e-35 152.9 259 42.5
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 4.3e-35 152.5 226 47.3
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 5.6e-35 152.1 247 43.3
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 5.6e-35 152.1 124 62.9
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 7.3e-35 151.8 244 45.1
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 9.5e-35 151.4 159 54.1
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 9.5e-35 151.4 124 62.1
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 9.5e-35 151.4 263 45.6
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 1.2e-34 151.0 253 42.7
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 1.2e-34 151.0 256 43.4
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.6e-34 150.6 253 41.1
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 2.1e-34 150.2 257 43.2
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 3.6e-34 149.4 257 40.9
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 4.7e-34 149.1 238 42.9
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 4.7e-34 149.1 237 42.6
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 6.2e-34 148.7 110 68.2
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 6.2e-34 148.7 110 68.2
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 8.1e-34 148.3 255 43.5
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 1.1e-33 147.9 235 44.3
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.4e-33 147.5 124 64.5
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 3.1e-33 146.4 230 44.8
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.1e-33 146.4 236 42.8
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 4.4e-32 142.5 189 46.6
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 7.6e-32 141.7 199 48.2
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 1.4e-30 137.5 168 51.2
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 1.4e-30 137.5 168 51.2
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 3.2e-30 136.3 116 59.5
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 5.4e-30 135.6 174 49.4
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 7.1e-30 135.2 166 51.2
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 7.1e-30 135.2 166 51.2
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 1.6e-29 134.0 166 51.2
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 4.6e-29 132.5 93 69.9
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.7e-23 114.0 140 48.6
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 5.4e-22 109.0 217 40.6
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 3.0e-20 103.2 55 92.7
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 5.6e-19 99.0 114 43.9
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.0e-16 90.5 96 47.9
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 5.8e-16 89.0 137 39.4
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 7.6e-16 88.6 81 56.8
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 9.9e-16 88.2 101 45.5
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 9.9e-16 88.2 82 56.1
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.9e-15 85.9 61 67.2
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.9e-15 85.9 61 67.2
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.9e-15 85.9 80 56.2
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.4e-15 85.1 58 69.0
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 4.2e-14 82.8 209 37.3
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 9.3e-14 81.6 77 59.7
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 3.9e-12 76.3 48 77.1
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 3.3e-11 73.2 55 67.3
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 7.4e-11 72.0 54 66.7
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 1.3e-07 61.2 115 34.8


User provided reference genes

Program Settings