Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 3.3e-124 448.4 225 100.0
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 1.5e-116 422.9 222 95.9
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.0e-112 410.2 223 90.6
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 8.3e-107 390.6 222 87.8
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 1.4e-106 389.8 223 87.9
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 4.1e-106 388.3 220 86.4
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 7.7e-105 384.0 217 87.1
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 7.8e-97 357.5 222 78.4
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 1.3e-96 356.7 219 78.5
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.5e-95 353.2 214 81.8
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 1.5e-95 353.2 214 79.0
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 1.5e-95 353.2 222 78.4
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.5e-95 352.4 217 78.8
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 1.2e-94 350.1 222 77.0
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.6e-94 349.7 222 78.8
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 2.1e-94 349.4 218 77.1
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 2.8e-94 349.0 222 77.5
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 4.7e-94 348.2 222 78.8
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 8.0e-94 347.4 214 78.0
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.0e-93 347.1 222 78.4
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 3.1e-93 345.5 214 78.0
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 4.0e-93 345.1 190 88.4
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 6.8e-93 344.4 214 77.6
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 8.9e-93 344.0 226 76.1
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 1.2e-92 343.6 220 76.4
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.6e-92 342.4 214 77.6
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 2.6e-92 342.4 214 78.5
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 3.4e-92 342.0 222 78.4
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 3.4e-92 342.0 222 77.5
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 3.4e-92 342.0 204 80.9
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 1.3e-91 340.1 219 77.2
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 3.7e-91 338.6 224 75.4
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 4.9e-91 338.2 214 76.6
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 4.9e-91 338.2 241 71.4
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 6.4e-91 337.8 222 74.8
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.1e-90 337.0 219 75.8
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.4e-90 336.7 214 74.8
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 4.1e-90 335.1 222 73.9
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 5.4e-90 334.7 222 74.8
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 7.0e-90 334.3 212 76.9
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 1.2e-89 333.6 222 75.7
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 2.0e-89 332.8 217 75.1
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 2.7e-89 332.4 219 76.3
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 6.0e-89 331.3 218 74.8
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 7.8e-89 330.9 217 74.7
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 7.8e-89 330.9 217 74.7
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 7.8e-89 330.9 222 74.8
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 7.8e-89 330.9 222 73.9
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.0e-88 330.5 213 76.5
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.3e-88 330.1 220 75.0
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 2.3e-88 329.3 217 74.2
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 3.0e-88 328.9 219 74.0
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 3.0e-88 328.9 218 75.2
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 3.9e-88 328.6 212 75.9
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 5.0e-88 328.2 212 74.5
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 6.6e-88 327.8 222 73.4
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 6.6e-88 327.8 226 76.1
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.1e-87 327.0 234 74.4
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.1e-87 327.0 227 72.2
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 1.1e-87 327.0 209 77.0
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 2.5e-87 325.9 217 76.5
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 7.3e-87 324.3 214 72.0
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 7.3e-87 324.3 217 73.7
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 9.5e-87 323.9 250 70.4
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 9.5e-87 323.9 217 73.3
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 9.5e-87 323.9 243 68.7
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 1.2e-86 323.6 221 71.0
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 2.1e-86 322.8 222 71.2
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 1.8e-85 319.7 221 71.0
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 3.1e-85 318.9 212 74.1
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 2.6e-84 315.8 222 71.6
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 6.4e-83 311.2 251 66.1
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.1e-82 310.5 200 79.5
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 1.9e-82 309.7 216 72.7
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.9e-82 309.7 220 71.8
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 5.4e-82 308.1 222 68.9
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 2.1e-81 306.2 224 70.1
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 2.3e-80 302.8 212 72.2
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 6.6e-80 301.2 211 69.2
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 8.6e-80 300.8 208 75.0
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 4.3e-79 298.5 211 68.7
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 4.3e-79 298.5 208 71.6
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 3.6e-78 295.4 221 70.6
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 3.1e-77 292.4 243 62.6
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 9.9e-76 287.3 220 64.5
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 9.9e-76 287.3 222 67.1
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 2.2e-75 286.2 188 75.0
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 5.4e-74 281.6 225 67.1
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 5.4e-74 281.6 216 66.7
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 6.0e-73 278.1 222 63.1
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.3e-71 272.3 178 74.2
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 4.3e-71 271.9 258 58.9
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.8e-69 266.5 204 65.2
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 2.4e-69 266.2 224 63.8
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 4.8e-62 241.9 215 58.1
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 2.0e-60 236.5 151 75.5
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 1.4e-58 230.3 204 60.3
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.9e-58 229.9 261 52.5
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 3.2e-58 229.2 196 64.3
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 4.2e-58 228.8 150 72.0
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 3.5e-57 225.7 215 55.3
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 2.3e-56 223.0 221 55.7
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 3.0e-56 222.6 150 72.0
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 1.0e-48 197.6 140 69.3
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 3.3e-47 192.6 223 48.4
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 4.3e-47 192.2 198 56.6
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 7.4e-47 191.4 309 40.1
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 6.7e-40 168.3 216 44.9
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 1.9e-39 166.8 150 54.7
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.9e-34 150.2 380 31.8
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.1e-33 146.7 107 68.2
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 4.6e-33 145.6 83 80.7
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 8.5e-27 124.8 84 70.2
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 3.3e-23 112.8 139 48.2
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 6.9e-21 105.1 70 68.6
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 2.2e-19 100.1 67 70.1
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 5.5e-18 95.5 66 75.8
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 9.4e-18 94.7 51 86.3
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 1.1e-15 87.8 78 59.0
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.3e-15 86.3 58 74.1
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 9.7e-15 84.7 66 74.2
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.4e-13 80.9 194 31.4
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.0e-11 74.7 99 42.4
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.0e-11 74.7 49 73.5
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 5.0e-11 72.4 49 73.5
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.9e-10 70.5 53 66.0
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 4.7e-09 65.9 43 79.1


User provided reference genes

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