Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G026400 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 1.0e-54 216.5 108 100.0
VMungo1127G1792 Vigna mungo HOM05D005726 ORTHO05D001733 1.9e-45 185.7 107 87.9
Glyma.12G024300 Glycine max HOM05D005726 ORTHO05D001733 1.3e-36 156.4 108 73.1
Sabra09G0098800 Salix brachista HOM05D005726 ORTHO05D001733 2.1e-15 85.9 106 50.9
Potri.009G129301 Populus trichocarpa HOM05D005726 ORTHO05D001733 2.7e-15 85.5 106 50.9
Phvul.011G178000 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 1.4e-14 83.2 95 56.8
Haze_02200 Corylus avellana HOM05D005726 ORTHO05D001733 4.4e-13 78.2 103 45.6
Glyma.08G148400 Glycine max HOM05D005726 ORTHO05D001733 9.7e-13 77.0 95 55.8
Potri.004G167800 Populus trichocarpa HOM05D005726 ORTHO05D001733 1.3e-12 76.6 108 48.1
Cfa005182 Carpinus fangiana HOM05D005726 ORTHO05D001733 1.7e-12 76.3 103 45.6
Duzib132G0889 Durio zibethinus HOM05D005726 ORTHO05D001733 1.1e-11 73.6 107 40.2
Cpa.g.sc37.193 Carica papaya HOM05D005726 ORTHO05D001733 7.0e-11 70.9 91 46.2
QL11p047517 Quercus lobata HOM05D005726 ORTHO05D001733 5.9e-10 67.8 97 45.4
Thecc.02G067200 Theobroma cacao HOM05D005726 ORTHO05D001733 7.7e-10 67.4 103 39.8
MD10G1118100 Malus domestica HOM05D005726 ORTHO05D001733 1.0e-09 67.0 105 41.0
Prupe.8G160400 Prunus persica HOM05D005726 ORTHO05D001733 3.8e-09 65.1 97 42.3
CiPaw.05G077000 Carya illinoinensis HOM05D005726 ORTHO05D001733 5.0e-09 64.7 107 40.2
Ca_18999_v3 Cicer arietinum L. HOM05D005726 ORTHO05D001733 8.5e-09 63.9 56 60.7
Atru.chr5.3224 Acer truncatum HOM05D005726 ORTHO05D001733 1.1e-08 63.5 107 39.3
FAN04G1699 Fragaria x ananassa HOM05D005726 ORTHO05D001733 1.9e-08 62.8 107 39.3
Gohir.D12G033000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 1.9e-08 62.8 107 41.1
Gorai.008G033800 Gossypium raimondii HOM05D005726 ORTHO05D001733 1.9e-08 62.8 107 41.1
Lalb_Chr03g0024681 Lupinus albus HOM05D005726 ORTHO05D001733 1.9e-08 62.8 62 51.6
Actinidia00594 Actinidia chinensis HOM05D005726 ORTHO05D001733 4.2e-08 61.6 100 45.0
Medtr4g075490 Medicago truncatula HOM05D005726 ORTHO05D001733 5.5e-08 61.2 55 60.0
Gohir.A12G039400 Gossypium hirsutum HOM05D005726 ORTHO05D001733 7.2e-08 60.8 107 40.2
TPR.G38487 Trifolium pratense HOM05D005726 ORTHO05D001733 2.1e-07 59.3 93 44.1
TAR376G0138 Trochodendron aralioides HOM05D005726 ORTHO05D001733 2.1e-07 59.3 109 40.4
COL.COLO4_17253 Corchorus olitorius HOM05D005726 ORTHO05D001733 2.7e-07 58.9 90 41.1
Ciclev10029543m.g Citrus clementina HOM05D005726 ORTHO05D001733 3.6e-07 58.5 90 41.1
MD05G1115600 Malus domestica HOM05D005726 ORTHO05D001733 3.6e-07 58.5 106 37.7
Glyma.04G005451 Glycine max HOM05D005726 ORTHO05D001733 4.7e-07 58.2 58 55.2
Medtr3g117720 Medicago truncatula HOM05D005726 ORTHO05D001733 4.7e-07 58.2 58 51.7
RcHm_v2.0_Chr6g0245271 Rosa chinensis HOM05D005726 ORTHO05D001733 6.1e-07 57.8 106 37.7
Ciclev10029854m.g Citrus clementina HOM05D005726 ORTHO05D001733 1.0e-06 57.0 90 40.0
CsaV3_2G015680 Cucumis sativus L. HOM05D005726 ORTHO05D001733 1.8e-06 56.2 97 43.3
MELO3C020779.2 Cucumis melo HOM05D005726 ORTHO05D001733 2.3e-06 55.8 97 43.3
ClCG02G011420 Citrullus lanatus HOM05D005726 ORTHO05D001733 4.0e-06 55.1 103 42.7
Nn5g30142 Nelumbo nucifera HOM05D005726 ORTHO05D001733 5.2e-06 54.7 107 36.4


User provided reference genes

Program Settings