Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G025900 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 1.2e-138 496.5 256 100.0
VMungo1127G1128 Vigna mungo HOM05D004848 ORTHO05D006859 1.6e-109 399.8 256 82.0
Glyma.11G097851 Glycine max HOM05D004848 ORTHO05D006859 7.0e-86 321.2 266 68.4
Medtr4g075580 Medicago truncatula HOM05D004848 ORTHO05D006859 4.4e-72 275.4 258 58.9
Lalb_Chr03g0024651 Lupinus albus HOM05D004848 ORTHO05D006859 2.5e-67 259.6 270 55.9
TPR.G17182 Trifolium pratense HOM05D004848 ORTHO05D006859 2.1e-66 256.5 253 57.3
Psat7g178040 Pisum sativum HOM05D004848 ORTHO05D006859 4.6e-61 238.8 242 54.1
Ca_08517_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 2.5e-59 233.0 256 52.0
CiPaw.10G064700 Carya illinoinensis HOM05D004848 ORTHO05D006859 3.2e-54 216.1 266 48.5
arahy.Tifrunner.gnm1.ann1.RCL750 Arachis hypogaea HOM05D004848 ORTHO05D006859 4.2e-54 215.7 286 47.2
Lsat_1_v5_gn_2_63860 Lactuca sativa HOM05D004848 ORTHO05D006859 2.1e-53 213.4 266 47.0
Cfa000710 Carpinus fangiana HOM05D004848 ORTHO05D006859 1.3e-52 210.7 260 46.9
Actinidia22396 Actinidia chinensis HOM05D004848 ORTHO05D006859 8.7e-52 208.0 271 46.1
Dinv25912 Davidia involucrata HOM05D004848 ORTHO05D006859 8.7e-52 208.0 283 46.6
Manes.16G057700 Manihot esculenta HOM05D004848 ORTHO05D006859 1.1e-51 207.6 284 44.4
vmacro03521 Vaccinium macrocarpon HOM05D004848 ORTHO05D006859 3.3e-51 206.1 273 47.6
TWI38G1208 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 5.6e-51 205.3 278 46.8
CSS0017265 Camellia sinensis var. sinensis HOM05D004848 ORTHO05D006859 9.6e-51 204.5 273 46.2
RcHm_v2.0_Chr5g0020101 Rosa chinensis HOM05D004848 ORTHO05D006859 8.1e-50 201.4 272 46.0
CANSAT35G1894 Cannabis sativa HOM05D004848 ORTHO05D006859 2.4e-49 199.9 274 48.5
Rhsim13G0132200 Rhododendron simsii HOM05D004848 ORTHO05D006859 5.3e-49 198.7 275 46.5
DCAR_007788 Daucus carota HOM05D004848 ORTHO05D006859 9.0e-49 198.0 280 46.1
Gohir.D05G148000 Gossypium hirsutum HOM05D004848 ORTHO05D006859 1.2e-48 197.6 278 47.1
Prupe.4G112000 Prunus persica HOM05D004848 ORTHO05D006859 1.5e-48 197.2 268 46.3
Gorai.009G152200 Gossypium raimondii HOM05D004848 ORTHO05D006859 2.6e-48 196.4 278 46.8
MD10G1232500 Malus domestica HOM05D004848 ORTHO05D006859 2.6e-48 196.4 271 46.1
COL.COLO4_30993 Corchorus olitorius HOM05D004848 ORTHO05D006859 7.6e-48 194.9 287 43.9
Sc12g0008200 Simmondsia chinensis HOM05D004848 ORTHO05D006859 7.6e-48 194.9 282 42.9
MD05G1251700 Malus domestica HOM05D004848 ORTHO05D006859 2.4e-46 189.9 270 46.7
FvH4_3g12290 Fragaria vesca HOM05D004848 ORTHO05D006859 1.2e-45 187.6 278 44.2
Gohir.A05G145600 Gossypium hirsutum HOM05D004848 ORTHO05D006859 1.2e-45 187.6 280 45.7
Duzib235G0624 Durio zibethinus HOM05D004848 ORTHO05D006859 1.6e-45 187.2 282 42.6
FAN16G1950 Fragaria x ananassa HOM05D004848 ORTHO05D006859 1.6e-45 187.2 275 44.0
Thecc.06G143000 Theobroma cacao HOM05D004848 ORTHO05D006859 2.7e-45 186.4 281 42.0
Sabra15G0138300 Salix brachista HOM05D004848 ORTHO05D006859 3.5e-45 186.0 256 43.8
FAN21G0923 Fragaria x ananassa HOM05D004848 ORTHO05D006859 4.6e-45 185.7 270 43.0
Sed0003868 Sechium edule HOM05D004848 ORTHO05D006859 6.0e-45 185.3 265 44.5
Potri.015G122200 Populus trichocarpa HOM05D004848 ORTHO05D006859 1.0e-44 184.5 260 45.8
FAN25G1789 Fragaria x ananassa HOM05D004848 ORTHO05D006859 1.3e-44 184.1 275 42.5
TAR371G0760 Trochodendron aralioides HOM05D004848 ORTHO05D006859 1.3e-44 184.1 297 41.1
HanXRQChr14g0447411 Helianthus annuus HOM05D004848 ORTHO05D006859 1.7e-44 183.7 268 43.3
Hund22216 Selenicereus undatus HOM05D004848 ORTHO05D006859 2.3e-44 183.3 289 41.9
THA.LOC104806215 Tarenaya hassleriana HOM05D004848 ORTHO05D006859 2.3e-44 183.3 280 43.2
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 3.0e-44 183.0 278 43.9
Duzib160G0177 Durio zibethinus HOM05D004848 ORTHO05D006859 1.1e-43 181.0 281 42.7
Ah.02g126290 Amaranthus hybridus HOM05D004848 ORTHO05D006859 1.9e-43 180.3 279 44.8
Migut.M01981 Erythranthe guttata HOM05D004848 ORTHO05D006859 4.3e-43 179.1 275 42.5
Ciclev10014513m.g Citrus clementina HOM05D004848 ORTHO05D006859 5.6e-43 178.7 262 43.5
Lj4g0026898 Lotus japonicus HOM05D004848 ORTHO05D006859 5.6e-43 178.7 251 44.6
ClCG01G025720 Citrullus lanatus HOM05D004848 ORTHO05D006859 1.3e-42 177.6 264 43.2
SalBow6G5406 Salvia bowleyana HOM05D004848 ORTHO05D006859 1.3e-42 177.6 277 41.9
SalBow8G3445 Salvia bowleyana HOM05D004848 ORTHO05D006859 1.3e-42 177.6 277 41.9
Atru.chr10.533 Acer truncatum HOM05D004848 ORTHO05D006859 2.1e-42 176.8 270 43.3
Atru.chr10.537 Acer truncatum HOM05D004848 ORTHO05D006859 2.1e-42 176.8 268 42.9
Nitab4.5_0000818g0090 Nicotiana tabacum HOM05D004848 ORTHO05D006859 2.1e-42 176.8 275 40.0
Nitab4.5_0004246g0030 Nicotiana tabacum HOM05D004848 ORTHO05D006859 3.6e-42 176.0 275 40.0
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 3.6e-42 176.0 288 42.0
MSTRG.13293 Avicennia marina HOM05D004848 ORTHO05D006859 1.4e-41 174.1 273 42.5
CAN.G149.35 Capsicum annuum HOM05D004848 ORTHO05D006859 1.4e-41 174.1 273 39.2
CsaV3_6G052960 Cucumis sativus L. HOM05D004848 ORTHO05D006859 1.4e-41 174.1 264 42.0
TAR371G0139 Trochodendron aralioides HOM05D004848 ORTHO05D006859 1.4e-41 174.1 297 39.7
MELO3C007013.2 Cucumis melo HOM05D004848 ORTHO05D006859 2.4e-41 173.3 262 42.0
CARHR226680 Cardamine hirsuta HOM05D004848 ORTHO05D006859 3.1e-41 172.9 285 40.7
Oeu056030.1 Olea europaea HOM05D004848 ORTHO05D006859 4.0e-41 172.6 282 41.1
A08p14580 Brassica napus HOM05D004848 ORTHO05D006859 5.3e-41 172.2 281 42.3
BraA08t33444Z Brassica rapa HOM05D004848 ORTHO05D006859 5.3e-41 172.2 281 42.3
Nitab4.5_0001288g0240 Nicotiana tabacum HOM05D004848 ORTHO05D006859 5.3e-41 172.2 275 39.6
Solyc02g068790.4 Solanum lycopersicum HOM05D004848 ORTHO05D006859 5.3e-41 172.2 275 39.6
Sopen02g017950 Solanum pennellii HOM05D004848 ORTHO05D006859 5.3e-41 172.2 275 39.6
Thhalv10024627m.g Eutrema salsugineum HOM05D004848 ORTHO05D006859 6.9e-41 171.8 284 41.9
AT4G19900 Arabidopsis thaliana HOM05D004848 ORTHO05D006859 1.2e-40 171.0 282 41.5
BcaC01g00643 Brassica carinata HOM05D004848 ORTHO05D006859 3.4e-40 169.5 281 41.3
Lj1A1145G19 Lonicera japonica HOM05D004848 ORTHO05D006859 1.3e-39 167.5 169 52.1
Cpa.g.sc135.8 Carica papaya HOM05D004848 ORTHO05D006859 1.7e-39 167.2 291 38.1
AL7G34080 Arabidopsis lyrata HOM05D004848 ORTHO05D006859 2.9e-39 166.4 294 38.4
AUR62003215 Chenopodium quinoa HOM05D004848 ORTHO05D006859 2.9e-39 166.4 270 44.4
AUR62008037 Chenopodium quinoa HOM05D004848 ORTHO05D006859 2.9e-39 166.4 270 44.8
Peaxi162Scf00149g00052 Petunia axillaris HOM05D004848 ORTHO05D006859 3.8e-39 166.0 274 39.1
BcaB03g11645 Brassica carinata HOM05D004848 ORTHO05D006859 6.4e-39 165.2 285 41.8
C03p82150 Brassica napus HOM05D004848 ORTHO05D006859 6.4e-39 165.2 281 40.9
BolC3t20538H Brassica oleracea HOM05D004848 ORTHO05D006859 6.4e-39 165.2 281 40.9
Carub.0007s2131 Capsella rubella HOM05D004848 ORTHO05D006859 1.1e-38 164.5 284 39.1
EL10Ac2g03656 Beta vulgaris HOM05D004848 ORTHO05D006859 1.9e-38 163.7 271 42.1
Nn7g38150 Nelumbo nucifera HOM05D004848 ORTHO05D006859 1.9e-38 163.7 294 39.5
Phvul.002G098100 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 2.1e-37 160.2 249 40.6
VMungo0251G2797 Vigna mungo HOM05D004848 ORTHO05D006859 2.1e-37 160.2 249 41.0
GSVIVG01012068001 Vitis vinifera HOM05D004848 ORTHO05D006859 1.0e-36 157.9 152 52.0
Cc09_g06070 Coffea canephora HOM05D004848 ORTHO05D006859 1.3e-36 157.5 284 38.4
CiPaw.09G077200 Carya illinoinensis HOM05D004848 ORTHO05D006859 1.8e-36 157.1 262 40.5
Glyma.20G020100 Glycine max HOM05D004848 ORTHO05D006859 5.1e-36 155.6 253 41.9
Psat7g130520 Pisum sativum HOM05D004848 ORTHO05D006859 8.7e-36 154.8 250 40.4
PSO541G1718 Papaver somniferum HOM05D004848 ORTHO05D006859 1.9e-35 153.7 289 37.7
Medtr4g084060 Medicago truncatula HOM05D004848 ORTHO05D006859 2.5e-35 153.3 256 38.3
CDE02G3340 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 4.3e-35 152.5 272 40.1
PSO675G2729 Papaver somniferum HOM05D004848 ORTHO05D006859 9.6e-35 151.4 289 37.4
arahy.Tifrunner.gnm1.ann1.4Z5NYX Arachis hypogaea HOM05D004848 ORTHO05D006859 1.3e-34 151.0 265 38.9
arahy.Tifrunner.gnm1.ann1.84J3B2 Arachis hypogaea HOM05D004848 ORTHO05D006859 3.7e-34 149.4 265 38.5
SHI34205 Sapria himalayana HOM05D004848 ORTHO05D006859 6.2e-34 148.7 254 37.8
Lalb_Chr16g0385221 Lupinus albus HOM05D004848 ORTHO05D006859 1.8e-33 147.1 267 37.1
EL10Ac5g12737 Beta vulgaris HOM05D004848 ORTHO05D006859 2.4e-33 146.7 245 37.1
SGA_v2.0_scaffold175G39362 Striga asiatica HOM05D004848 ORTHO05D006859 3.1e-33 146.4 256 37.1
MBI18_g11477_MAGBIO Magnolia biondii HOM05D004848 ORTHO05D006859 1.5e-32 144.1 295 37.6
Aqoxy1G01449 Aquilegia oxysepala HOM05D004848 ORTHO05D006859 2.6e-32 143.3 305 35.4
AUR62024532 Chenopodium quinoa HOM05D004848 ORTHO05D006859 1.3e-31 141.0 186 40.9
Ca_18763_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 8.4e-31 138.3 252 36.1
AUR62022464 Chenopodium quinoa HOM05D004848 ORTHO05D006859 4.2e-30 136.0 201 38.8
PGR042G2559 Punica granatum HOM05D004848 ORTHO05D006859 9.3e-30 134.8 166 44.6
HPP92_015950 Vanilla planifolia HOM05D004848 ORTHO05D006859 1.3e-28 131.0 258 37.6
QL11p016422 Quercus lobata HOM05D004848 ORTHO05D006859 3.0e-28 129.8 291 34.7
ATR0763G002 Amborella trichopoda HOM05D004848 ORTHO05D006859 2.4e-25 120.2 230 34.8
unitig_21.g20196 Utricularia gibba HOM05D004848 ORTHO05D006859 1.2e-24 117.9 255 34.5
Os07g0567300 Oryza sativa ssp. japonica HOM05D004848 ORTHO05D006859 9.3e-22 108.2 178 37.6
CDE05G1435 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 1.8e-20 104.0 251 36.7
TPR.G20986 Trifolium pratense HOM05D004848 ORTHO05D006859 2.3e-20 103.6 106 45.3
Zm00001eb324590 Zea mays HOM05D004848 ORTHO05D006859 5.1e-20 102.4 178 34.8
SEGI_06238 Sequoiadendron giganteum HOM05D004848 ORTHO05D006859 1.1e-19 101.3 217 30.0
TWI63G1813 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 2.2e-18 97.1 191 36.6
Glyma.07G221700 Glycine max HOM05D004848 ORTHO05D006859 6.9e-17 92.0 116 43.1
arahy.Tifrunner.gnm1.ann1.DSI1DH Arachis hypogaea HOM05D004848 ORTHO05D006859 3.3e-11 73.2 143 39.9
AagrBONN_evm.TU.Sc2ySwM_344.2562 Anthoceros agrestis HOM05D004848 ORTHO05D006859 1.4e-09 67.8 147 29.9
VMungo1309G0455 Vigna mungo HOM05D010006 ORTHO05D009911 2.6e-08 63.5 97 39.2
ECA238G4765 Erigeron canadensis HOM05D004848 ORTHO05D006859 1.3e-07 61.2 270 27.0


User provided reference genes

Program Settings